RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 IGKV1D-43A0A0B4J1Z2 117 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 A0A0J9YW62 118 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR6C6A6NF89 314 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 GGT3PA6NGU5 568 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR5H1A6NKK0 313 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 ZNF729A6NN14 1252 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 HMSDA8MTL9 139 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM14DPA8MWL7 114 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAM25AB3EWG3 89 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAM25CB3EWG5 89 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAM25GB3EWG6 89 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 ZNF878C9JN71 531 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 M0R233 179 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 MFNGO00587 321 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 NOS1APO75052 506 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 NDUFB6O95139 128 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGLV2-23P01705 113 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGHG2P01859 326 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 TTRP02766 147 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 CECR9P0C854 216 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 AKR1C4P17516 323 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 RAB3AP20336 220 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 CDK2P24941 298 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 AGTR1P30556 359 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 PRSS3P35030 304 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAUP35544 74 aaKnown RBP1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 CEACAM6P40199 344 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 GUCA1AP43080 201 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 PSMB2P49721 201 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 EIF2B2P49770 351 aaKnown RBP1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 ZNF138P52744 262 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 CRYBA4P53673 196 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 TCL1AP56279 114 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 TAS2R20P59543 309 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 PCBD1P61457 104 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 GRB2P62993 217 aaKnown RBP1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 HBG1P69891 147 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 HBG2P69892 147 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 IFITM2Q01629 132 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 FOXF1Q12946 379 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 GRK1Q15835 563 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 NNATQ16517 81 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 ACOT6Q3I5F7 207 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM69Q5SWH9 247 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 GLYATL3Q5SZD4 288 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 PRR9Q5T870 116 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 GLT8D1Q68CQ7 371 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 CLEC19AQ6UXS0 136 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 SCXQ7RTU7 201 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 DPPA2Q7Z7J5 298 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 SNX29P2Q8IUI4 249 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR5AS1Q8N127 324 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 SLC22A24Q8N4F4 322 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 TOMM5Q8N4H5 51 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 ZNF676Q8N7Q3 588 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 Q8N976 141 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM229BQ8NBD8 167 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR5D14Q8NGL3 314 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR11L1Q8NGX0 322 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR1P1Q8NH06 330 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR10AC1Q8NH08 325 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR10D3Q8NH80 312 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 GRPEL2Q8TAA5 225 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 THEM6Q8WUY1 208 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 PP6455Q8WZ26 134 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 AQP3Q92482 292 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 CCL17Q92583 94 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM106AQ96A25 262 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 SLAMF6Q96DU3 332 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 MRPS24Q96EL2 167 aaKnown RBP1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 FMC1Q96HJ9 113 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 CAMK2N2Q96S95 79 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 AMELYQ99218 206 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 TBX5Q99593 518 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM208Q9BTX3 173 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 SLC25A2Q9BXI2 301 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 PBOV1Q9GZY1 135 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 MED28Q9H204 178 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 RERGLQ9H628 205 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 SPANXA1Q9NS26 97 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 MED9Q9NWA0 146 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 CKLFQ9UBR5 152 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 SCP2D1Q9UJQ7 156 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 ALG5Q9Y673 324 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 V9GYS6 101 aa1.23□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGHV6-1A0A0B4J1U7 121 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 TRAV8-2A0A0B4J237 113 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 TRAV10A0A0B4J240 114 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 TRAV8-6A0A0B4J262 113 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGKV1-9A0A0C4DH69 117 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 A0A1B0GV72 72 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 LOC107986453A0A1B0GWG9 222 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 LINC00862A6NCI5 91 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 RBFOX3A6NFN3 312 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 CD300LBA8K4G0 201 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 ZNF736B4DX44 427 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 MCRIP1C9JLW8 97 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 G3V3Q6 166 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 H7C1C5 153 aa1.22□□□□□ -2.21
HMGB1P18-201ENST00000438801 DNASE2O00115 360 aaPredicted RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms