RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 TRAV25A0A0B4J276 109 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 CCL3L1P16619 93 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 NTN5Q8WTR8 489 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-209ENST00000437951 TET2Q6N021 2002 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-209ENST00000437951 IGHV3OR16-8A0A075B7F1 116 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 C15orf62A8K5M9 175 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 M0R1W7 72 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 TMEM14CQ9P0S9 112 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 RHOHQ15669 191 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 V9GYV3 84 aa9.38□□□□□ -0.91
PTCH1-209ENST00000437951 ARHGAP21Q5T5U3 1957 aa9.37□□□□□ -0.91
PTCH1-209ENST00000437951 MRPL51Q4U2R6 128 aaKnown RBP9.37□□□□□ -0.91
PTCH1-209ENST00000437951 FAM236AA0A1B0GUQ0 79 aa9.37□□□□□ -0.91
PTCH1-209ENST00000437951 FAM236BA0A1B0GV22 79 aa9.37□□□□□ -0.91
PTCH1-209ENST00000437951 LTBRP36941 435 aa9.37□□□□□ -0.91
PTCH1-209ENST00000437951 GREB1LQ9C091 1923 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-209ENST00000437951 TRAV12-1A0A0B4J245 112 aa9.37□□□□□ -0.91
PTCH1-209ENST00000437951 H0YJW9 148 aa9.37□□□□□ -0.91
PTCH1-209ENST00000437951 MST1LQ2TV78 715 aa9.37□□□□□ -0.91
PTCH1-209ENST00000437951 ATP5EP56381 51 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-209ENST00000437951 Q71RC1 249 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-209ENST00000437951 BRK1Q8WUW1 75 aa9.37□□□□□ -0.91
PTCH1-209ENST00000437951 IGHV3-73A0A0B4J1V6 119 aa9.37□□□□□ -0.91
PTCH1-209ENST00000437951 CFHR2P36980 270 aa9.37□□□□□ -0.91
PTCH1-209ENST00000437951 RMI2Q96E14 147 aa9.37□□□□□ -0.91
PTCH1-209ENST00000437951 SRRM5B3KS81 715 aa9.36□□□□□ -0.91
PTCH1-209ENST00000437951 VWA8A3KMH1 1905 aa9.36□□□□□ -0.91
PTCH1-209ENST00000437951 CCL25O15444 150 aa9.36□□□□□ -0.91
PTCH1-209ENST00000437951 PRR14LQ5THK1 2151 aa9.36□□□□□ -0.91
PTCH1-209ENST00000437951 IGHV1-3A0A0C4DH29 117 aa9.36□□□□□ -0.91
PTCH1-209ENST00000437951 RNF166Q96A37 237 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-209ENST00000437951 HCFC1P51610 2035 aa9.36□□□□□ -0.91
PTCH1-209ENST00000437951 PRSS57Q6UWY2 283 aa9.36□□□□□ -0.91
PTCH1-209ENST00000437951 DSCAMO60469 2012 aa9.36□□□□□ -0.91
PTCH1-209ENST00000437951 RNASE6Q93091 150 aaKnown RBP9.36□□□□□ -0.91
PTCH1-209ENST00000437951 G3V4G9 280 aa9.36□□□□□ -0.91
PTCH1-209ENST00000437951 IGKV1D-8A0A087WSZ0 117 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 CSRP2Q16527 193 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 CRYGSP22914 178 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 KIF26AQ9ULI4 1882 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-209ENST00000437951 GAS1P54826 345 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 SEC61GP60059 68 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 C8orf86Q6ZUL3 223 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 KIAA1549Q9HCM3 1950 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 K7ERJ3 54 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 RNF114Q9Y508 228 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 JMJD7-PLA2G4BH0Y9G9 81 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 IGHV1-8P0DP01 117 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 ZNF493Q6ZR52 646 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 DAZ1Q9NQZ3 744 aaKnown RBP9.35□□□□□ -0.91
PTCH1-209ENST00000437951 C5orf64Q2M2E5 130 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 SAP25Q8TEE9 199 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 SMIM2Q9BVW6 85 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 MRPL35Q9NZE8 188 aaKnown RBP9.35□□□□□ -0.91
PTCH1-209ENST00000437951 HIGD1BQ9P298 99 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 MUSTN1Q8IVN3 82 aa9.35□□□□□ -0.91
PTCH1-209ENST00000437951 FOXF2Q12947 444 aa9.34□□□□□ -0.91
PTCH1-209ENST00000437951 RLFQ13129 1914 aa9.34□□□□□ -0.91
PTCH1-209ENST00000437951 PDE6GP18545 87 aa9.34□□□□□ -0.91
PTCH1-209ENST00000437951 CFHR4Q92496 578 aa9.34□□□□□ -0.91
PTCH1-209ENST00000437951 KLF2Q9Y5W3 355 aaPredicted RBP9.34□□□□□ -0.91
PTCH1-209ENST00000437951 TEX48A0A1B0GUV7 120 aa9.34□□□□□ -0.91
PTCH1-209ENST00000437951 RNASE2P10153 161 aaKnown RBP9.34□□□□□ -0.91
PTCH1-209ENST00000437951 A0A087WWL8 130 aa9.34□□□□□ -0.91
PTCH1-209ENST00000437951 NDUFS5O43920 106 aa9.34□□□□□ -0.91
PTCH1-209ENST00000437951 CXCL5P42830 114 aa9.34□□□□□ -0.91
PTCH1-209ENST00000437951 Q8TAT8 98 aa9.34□□□□□ -0.91
PTCH1-209ENST00000437951 SAP30O75446 220 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 QRFPP83859 136 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 THBDP07204 575 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 COA6Q5JTJ3 125 aaKnown RBP9.33□□□□□ -0.92
PTCH1-209ENST00000437951 BAALCQ8WXS3 180 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 NRXN2Q9P2S2 1712 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 NLRC5Q86WI3 1866 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 TINCRA0A1B0GVN0 87 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 SDHAF1A6NFY7 115 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 LHBP01229 141 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 FNDC1Q4ZHG4 1894 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-209ENST00000437951 NDUFS7O75251 213 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 SIGLEC9Q9Y336 463 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 TMEM14BQ9NUH8 114 aa9.33□□□□□ -0.92
PTCH1-209ENST00000437951 MCRIP2Q9BUT9 160 aaKnown RBP9.32□□□□□ -0.92
PTCH1-209ENST00000437951 IGHV1-69DA0A0B4J2H0 117 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 C11orf52Q96A22 123 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 E9PQ18 207 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 LYPD3O95274 346 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 SLC25A45Q8N413 288 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 NDUFB1O75438 58 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 FAM240AA0A1B0GVK7 77 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 IGLL5B9A064 214 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 IGLC1P0CG04 106 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 FOXI1Q12951 378 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 NCOA6Q14686 2063 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-209ENST00000437951 ICOSQ9Y6W8 199 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 TMEM200BQ69YZ2 307 aa9.32□□□□□ -0.92
PTCH1-209ENST00000437951 BUB1B-PAK6H3BSN5 160 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 H3BT86 120 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 PFN2P35080 140 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 PRSS29PA6NIE9 313 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 CELA3BP08861 270 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms