RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 IGHV7-4-1A0A0J9YVY3 117 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 NCR2O95944 276 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 ZNF134P52741 427 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 C1orf194Q5T5A4 169 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 IGFL4Q6B9Z1 124 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 Q8TAT8 98 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 WFDC1Q9HC57 220 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 PSME4Q14997 1843 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 ARFGEF1Q9Y6D6 1849 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 NINQ8N4C6 2090 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 COL6A6A6NMZ7 2263 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 IGHV3-38A0A0C4DH36 116 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 C9JAW5 83 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 GAGE2BQ13066 116 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 C8orf86Q6ZUL3 223 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 UBL5Q9BZL1 73 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 COL5A3P25940 1745 aaPredicted RBP4.6□□□□□ -1.67
HERC4-206ENST00000427635 PDCD11Q14690 1871 aaKnown RBP4.6□□□□□ -1.67
HERC4-206ENST00000427635 PRB4P10163 310 aaPredicted RBP4.6□□□□□ -1.67
HERC4-206ENST00000427635 HLA-DRB4P13762 266 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 HERVK_113P63121 156 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 RPP25LQ8N5L8 163 aaKnown RBP4.6□□□□□ -1.67
HERC4-206ENST00000427635 TMEM242Q9NWH2 141 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 HLA-DRB4X5D2U9 266 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 ATRXP46100 2492 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 IFITM3Q01628 133 aa4.6□□□□□ -1.67
HERC4-206ENST00000427635 TRAV8-1A0A0A6YYK1 113 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 IGHV4-59P01825 116 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 GTSF1Q8WW33 167 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 TRAV12-2A0A075B6T6 113 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 TRAV13-2A0A0B4J235 113 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 CCL25O15444 150 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 TRIAP1O43715 76 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 XCL1P47992 114 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 PDE6HQ13956 83 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 SEM1Q6ZVN7 128 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 FAM19A2Q8N3H0 131 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 FGFBP3Q8TAT2 258 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 PRORYQ9H606 182 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 MYO5AQ9Y4I1 1855 aaKnown RBP4.59□□□□□ -1.67
HERC4-206ENST00000427635 PTPRQQ9UMZ3 2332 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 LRCOL1A6NCL2 159 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 HOXB4P17483 251 aaPredicted RBP4.59□□□□□ -1.67
HERC4-206ENST00000427635 STPG4Q8N801 248 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 Q8TCH9 128 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 TCF20Q9UGU0 1960 aaKnown RBP4.59□□□□□ -1.67
HERC4-206ENST00000427635 SPRY2O43597 315 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 EGR2P11161 476 aaPredicted RBP4.59□□□□□ -1.67
HERC4-206ENST00000427635 INSL3P51460 131 aa4.59□□□□□ -1.67
HERC4-206ENST00000427635 LY75O60449 1722 aa4.59□□□□□ -1.68
HERC4-206ENST00000427635 CACNA1EQ15878 2313 aa4.59□□□□□ -1.68
HERC4-206ENST00000427635 hDV102S1A0JD36 115 aa4.59□□□□□ -1.68
HERC4-206ENST00000427635 H3BUT2 72 aa4.59□□□□□ -1.68
HERC4-206ENST00000427635 IGHV2-5P01817 119 aa4.59□□□□□ -1.68
HERC4-206ENST00000427635 ARMS2P0C7Q2 107 aa4.59□□□□□ -1.68
HERC4-206ENST00000427635 LAIR2Q6ISS4 152 aa4.59□□□□□ -1.68
HERC4-206ENST00000427635 LINC01551Q86U37 167 aa4.59□□□□□ -1.68
HERC4-206ENST00000427635 SHANK2-AS3Q9BTD1 123 aa4.59□□□□□ -1.68
HERC4-206ENST00000427635 A0A087WWC5 75 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 GAGE12HA6NDE8 117 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 FUSP35637 526 aaKnown RBP eCLIP4.58□□□□□ -1.68
HERC4-206ENST00000427635 FOXG1P55316 489 aaPredicted RBP4.58□□□□□ -1.68
HERC4-206ENST00000427635 RTBDNQ9BSG5 229 aaPredicted RBP4.58□□□□□ -1.68
HERC4-206ENST00000427635 IGKV1D-13A0A0B4J2D9 117 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 G3V318 75 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 IGKV1-13P0DP09 117 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 ZFP36P26651 326 aaKnown RBP4.58□□□□□ -1.68
HERC4-206ENST00000427635 HSD52Q0P140 79 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 PLA2G2CQ5R387 149 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 TMEM75Q8N9X5 138 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 C11orf45Q8TAV5 145 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 C17orf77Q96MU5 243 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 ZNF236Q9UL36 1845 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 PIN1P1O15428 100 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 EIF4EBP3O60516 100 aaPredicted RBP4.58□□□□□ -1.68
HERC4-206ENST00000427635 LYPD3O95274 346 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 IGHG4P01861 327 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 CD55P08174 381 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 PPDPFQ9H3Y8 114 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 YPEL3P61236 119 aaPredicted RBP4.58□□□□□ -1.68
HERC4-206ENST00000427635 NDUFA11Q86Y39 141 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 ODF3L1Q8IXM7 274 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 RNASE2P10153 161 aaKnown RBP4.58□□□□□ -1.68
HERC4-206ENST00000427635 MDFIQ99750 246 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 SPATA25Q9BR10 227 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 TP53TG1Q9Y2A0 90 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 BRWD1Q9NSI6 2320 aa4.58□□□□□ -1.68
HERC4-206ENST00000427635 IGKV1D-17A0A075B6S4 117 aa4.57□□□□□ -1.68
HERC4-206ENST00000427635 H3BQ85 93 aa4.57□□□□□ -1.68
HERC4-206ENST00000427635 C20orf144Q9BQM9 153 aa4.57□□□□□ -1.68
HERC4-206ENST00000427635 LYRM9A8MSI8 78 aa4.57□□□□□ -1.68
HERC4-206ENST00000427635 PLA2G10O15496 165 aa4.57□□□□□ -1.68
HERC4-206ENST00000427635 HAMPP81172 84 aa4.57□□□□□ -1.68
HERC4-206ENST00000427635 Q0VG73 95 aa4.57□□□□□ -1.68
HERC4-206ENST00000427635 TMEM258P61165 79 aa4.57□□□□□ -1.68
HERC4-206ENST00000427635 ATP6V0E2Q8NHE4 81 aa4.57□□□□□ -1.68
HERC4-206ENST00000427635 WISP3O95389 354 aaPredicted RBP4.57□□□□□ -1.68
HERC4-206ENST00000427635 SLURP1P55000 103 aa4.57□□□□□ -1.68
HERC4-206ENST00000427635 SAMD5Q5TGI4 173 aa4.57□□□□□ -1.68
HERC4-206ENST00000427635 PIP4P1Q86T03 277 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms