RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 KLK9Q9UKQ9 250 aa10.94□□□□□ -0.66
RPL28-202ENST00000426763 LOXL1Q08397 574 aaPredicted RBP10.93□□□□□ -0.66
RPL28-202ENST00000426763 ATP6V0BQ99437 205 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 SIRPDQ9H106 197 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 LSM4Q9Y4Z0 139 aaKnown RBP10.93□□□□□ -0.66
RPL28-202ENST00000426763 IGLV1-47P01700 117 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 IGKCP01834 107 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 C5orf56Q8N8D9 126 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 PRR25Q96S07 402 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 SNAI2O43623 268 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 PRR20EP86478 221 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 PRR20CP86479 221 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 PRR20DP86480 221 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 PRR20BP86481 221 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 PRR20AP86496 221 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 Q8N9W7 124 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 LAMTOR2Q9Y2Q5 125 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 FAM231BA6NCW3 169 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 GGTLC3B5MD39 225 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 ZNF726P1Q15940 193 aa10.93□□□□□ -0.66
RPL28-202ENST00000426763 CT83Q5H943 113 aa10.92□□□□□ -0.66
RPL28-202ENST00000426763 TRPT1Q86TN4 253 aaKnown RBP10.92□□□□□ -0.66
RPL28-202ENST00000426763 ST6GALNAC6Q969X2 333 aa10.92□□□□□ -0.66
RPL28-202ENST00000426763 TEX43Q6ZNM6 134 aa10.92□□□□□ -0.66
RPL28-202ENST00000426763 AMN1Q8IY45 258 aa10.92□□□□□ -0.66
RPL28-202ENST00000426763 RBMY1BA6NDE4 496 aaKnown RBP10.92□□□□□ -0.66
RPL28-202ENST00000426763 RBMY1EA6NEQ0 496 aaKnown RBP10.92□□□□□ -0.66
RPL28-202ENST00000426763 COLCA2A8K830 154 aa10.92□□□□□ -0.66
RPL28-202ENST00000426763 RBMY1DP0C7P1 496 aaKnown RBP10.92□□□□□ -0.66
RPL28-202ENST00000426763 RBMY1A1P0DJD3 496 aaKnown RBP10.92□□□□□ -0.66
RPL28-202ENST00000426763 RBMY1CP0DJD4 496 aa10.92□□□□□ -0.66
RPL28-202ENST00000426763 SEC11AP67812 179 aa10.92□□□□□ -0.66
RPL28-202ENST00000426763 SSBP2P81877 361 aaPredicted RBP10.92□□□□□ -0.66
RPL28-202ENST00000426763 LINC00518Q8N0U6 118 aa10.92□□□□□ -0.66
RPL28-202ENST00000426763 IL15RAQ13261 267 aa10.91□□□□□ -0.66
RPL28-202ENST00000426763 DEFB136Q30KP8 78 aa10.91□□□□□ -0.66
RPL28-202ENST00000426763 PRR31Q5SQ13 230 aa10.91□□□□□ -0.66
RPL28-202ENST00000426763 FXYD5Q96DB9 178 aa10.91□□□□□ -0.66
RPL28-202ENST00000426763 F5H768 121 aa10.91□□□□□ -0.66
RPL28-202ENST00000426763 RITA1Q96K30 269 aa10.91□□□□□ -0.66
RPL28-202ENST00000426763 A8MWV9 139 aa10.91□□□□□ -0.66
RPL28-202ENST00000426763 C9orf66Q5T8R8 295 aa10.91□□□□□ -0.66
RPL28-202ENST00000426763 FOXI2Q6ZQN5 318 aa10.91□□□□□ -0.66
RPL28-202ENST00000426763 OR2K2Q8NGT1 345 aa10.91□□□□□ -0.66
RPL28-202ENST00000426763 CREBBPQ92793 2442 aa10.91□□□□□ -0.66
RPL28-202ENST00000426763 IGLV11-55A0A075B6I3 123 aa10.9□□□□□ -0.66
RPL28-202ENST00000426763 TRAV12-2A0A075B6T6 113 aa10.9□□□□□ -0.66
RPL28-202ENST00000426763 PHLDA1Q8WV24 401 aaPredicted RBP10.9□□□□□ -0.66
RPL28-202ENST00000426763 MRPL16Q9NX20 251 aaKnown RBP10.9□□□□□ -0.66
RPL28-202ENST00000426763 PIEZO1Q92508 2521 aa10.9□□□□□ -0.66
RPL28-202ENST00000426763 AZU1P20160 251 aa10.9□□□□□ -0.66
RPL28-202ENST00000426763 ANKHD1Q8IWZ3 2542 aaKnown RBP10.9□□□□□ -0.66
RPL28-202ENST00000426763 PRSS46E5RG02 174 aa10.9□□□□□ -0.66
RPL28-202ENST00000426763 ABCA1O95477 2261 aa10.9□□□□□ -0.66
RPL28-202ENST00000426763 TRBV7-9A0A0J9YWB2 115 aa10.9□□□□□ -0.66
RPL28-202ENST00000426763 CTAG1AP78358 180 aa10.9□□□□□ -0.66
RPL28-202ENST00000426763 ANXA2RQ3ZCQ2 193 aa10.9□□□□□ -0.67
RPL28-202ENST00000426763 CKS1BP61024 79 aa10.89□□□□□ -0.67
RPL28-202ENST00000426763 I3L2K1 104 aa10.89□□□□□ -0.67
RPL28-202ENST00000426763 PSCAO43653 123 aa10.89□□□□□ -0.67
RPL28-202ENST00000426763 DEFB104AQ8WTQ1 72 aa10.89□□□□□ -0.67
RPL28-202ENST00000426763 C1orf159Q96HA4 380 aa10.89□□□□□ -0.67
RPL28-202ENST00000426763 TRAV9-2A0A087WT02 112 aa10.89□□□□□ -0.67
RPL28-202ENST00000426763 CFHR3Q02985 330 aa10.89□□□□□ -0.67
RPL28-202ENST00000426763 VWC2Q2TAL6 325 aa10.89□□□□□ -0.67
RPL28-202ENST00000426763 NCKAP5O14513 1909 aa10.89□□□□□ -0.67
RPL28-202ENST00000426763 SMKR1H3BMG3 65 aa10.89□□□□□ -0.67
RPL28-202ENST00000426763 SLURP1P55000 103 aa10.89□□□□□ -0.67
RPL28-202ENST00000426763 CD300EQ496F6 205 aaPredicted RBP10.89□□□□□ -0.67
RPL28-202ENST00000426763 K7EIM0 57 aa10.88□□□□□ -0.67
RPL28-202ENST00000426763 LMO4P61968 165 aa10.88□□□□□ -0.67
RPL28-202ENST00000426763 CYYR1Q96J86 154 aa10.88□□□□□ -0.67
RPL28-202ENST00000426763 GAGE12BA1L429 117 aa10.88□□□□□ -0.67
RPL28-202ENST00000426763 GAGE7O76087 117 aa10.88□□□□□ -0.67
RPL28-202ENST00000426763 GAGE12FP0CL80 117 aa10.88□□□□□ -0.67
RPL28-202ENST00000426763 GAGE12GP0CL81 117 aa10.88□□□□□ -0.67
RPL28-202ENST00000426763 GAGE12IP0CL82 117 aa10.88□□□□□ -0.67
RPL28-202ENST00000426763 MORN3Q6PF18 240 aaPredicted RBP10.88□□□□□ -0.67
RPL28-202ENST00000426763 MRPL53Q96EL3 112 aaKnown RBP10.88□□□□□ -0.67
RPL28-202ENST00000426763 AJUBAQ96IF1 538 aa10.88□□□□□ -0.67
RPL28-202ENST00000426763 SPAG8Q99932 426 aaPredicted RBP10.88□□□□□ -0.67
RPL28-202ENST00000426763 FREM1Q5H8C1 2179 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 ZNF815PA8K554 130 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 APOMO95445 188 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 TMEM86BQ8N661 226 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 TMEM213A2RRL7 107 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 PLNP26678 52 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 FAM231DQ6ZW35 169 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 ZMAT4Q9H898 229 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 LOC102724200A0A096LPH7 203 aaPredicted RBP10.87□□□□□ -0.67
RPL28-202ENST00000426763 GAGE12JA6NER3 117 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 TNFRSF6BO95407 300 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 GAGE1Q13065 139 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 GAGE4Q13068 117 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 GAGE5Q13069 117 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 GAGE13Q4V321 117 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 C22orf34Q6ZV56 151 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 TMEM158Q8WZ71 300 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 TMEM89A2RUT3 159 aa10.87□□□□□ -0.67
RPL28-202ENST00000426763 IGLV2-23P01705 113 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms