RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TCF24Q7RTU0 167 aa11.49□□□□□ -0.57
ACTB-204ENST00000425660 KLHL30-AS1Q8NEE0 82 aa11.49□□□□□ -0.57
ACTB-204ENST00000425660 OR4B1Q8NGF8 309 aa11.49□□□□□ -0.57
ACTB-204ENST00000425660 DCANP1Q8TF63 244 aa11.49□□□□□ -0.57
ACTB-204ENST00000425660 DAZAP1Q96EP5 407 aaKnown RBP11.49□□□□□ -0.57
ACTB-204ENST00000425660 RPL11P62913 178 aaKnown RBP11.49□□□□□ -0.57
ACTB-204ENST00000425660 OR1N2Q8NGR9 330 aa11.49□□□□□ -0.57
ACTB-204ENST00000425660 C20orf173Q96LM9 149 aa11.49□□□□□ -0.57
ACTB-204ENST00000425660 C8orf49Q96NF6 230 aa11.49□□□□□ -0.57
ACTB-204ENST00000425660 FAM231BA6NCW3 169 aa11.48□□□□□ -0.57
ACTB-204ENST00000425660 CT45A10P0DMU9 189 aa11.48□□□□□ -0.57
ACTB-204ENST00000425660 SLURP1P55000 103 aa11.48□□□□□ -0.57
ACTB-204ENST00000425660 KHDC1LQ5JSQ8 128 aa11.48□□□□□ -0.57
ACTB-204ENST00000425660 Q8TAT8 98 aa11.48□□□□□ -0.57
ACTB-204ENST00000425660 ASCL2Q99929 193 aa11.48□□□□□ -0.57
ACTB-204ENST00000425660 GFRA4Q9GZZ7 299 aa11.48□□□□□ -0.57
ACTB-204ENST00000425660 A8MWL6 223 aa11.47□□□□□ -0.57
ACTB-204ENST00000425660 FHL3Q13643 280 aa11.47□□□□□ -0.57
ACTB-204ENST00000425660 ACTL10Q5JWF8 245 aa11.47□□□□□ -0.57
ACTB-204ENST00000425660 DPF1Q92782 380 aa11.47□□□□□ -0.57
ACTB-204ENST00000425660 NEU1Q99519 415 aa11.47□□□□□ -0.57
ACTB-204ENST00000425660 GPR61Q9BZJ8 451 aa11.47□□□□□ -0.57
ACTB-204ENST00000425660 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
ACTB-204ENST00000425660 NAT8BQ9UHF3 227 aa11.47□□□□□ -0.57
ACTB-204ENST00000425660 IZUMO1RA6ND01 250 aa11.46□□□□□ -0.57
ACTB-204ENST00000425660 CD28P10747 220 aa11.46□□□□□ -0.57
ACTB-204ENST00000425660 RPL19P84098 196 aaKnown RBP11.46□□□□□ -0.57
ACTB-204ENST00000425660 ERCC8Q13216 396 aa11.46□□□□□ -0.57
ACTB-204ENST00000425660 ADAMTSL5Q6ZMM2 481 aa11.46□□□□□ -0.57
ACTB-204ENST00000425660 NDFIP1Q9BT67 221 aa11.46□□□□□ -0.57
ACTB-204ENST00000425660 OVOL1O14753 267 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 HIST1H2BKO60814 126 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 HIST1H2BJP06899 126 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 HIST1H2BOP23527 126 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 HIST1H2BBP33778 126 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 ZNF138P52744 262 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 TCL1AP56279 114 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 PROK1P58294 105 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 HIST1H2BDP58876 126 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 HIST1H2BCP62807 126 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 HIST2H2BEQ16778 126 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.46□□□□□ -0.58
ACTB-204ENST00000425660 FAM162BQ5T6X4 162 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 TMEM78Q5T7P6 136 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 ZNF738Q8NE65 137 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 NUP35Q8NFH5 326 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 OR9G4Q8NGQ1 327 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 FRZBQ92765 325 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 HIST1H2BHQ93079 126 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 HIST1H2BNQ99877 126 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 HIST1H2BMQ99879 126 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 PEMTQ9UBM1 199 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 LENEPQ9Y5L5 61 aa11.46□□□□□ -0.58
ACTB-204ENST00000425660 TSSC4Q9Y5U2 329 aaPredicted RBP11.46□□□□□ -0.58
ACTB-204ENST00000425660 FN1P02751 2386 aaKnown RBP11.45□□□□□ -0.58
ACTB-204ENST00000425660 HIGD1CA8MV81 97 aa11.45□□□□□ -0.58
ACTB-204ENST00000425660 TCF21O43680 179 aa11.45□□□□□ -0.58
ACTB-204ENST00000425660 FOXA3P55318 350 aaPredicted RBP11.45□□□□□ -0.58
ACTB-204ENST00000425660 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
ACTB-204ENST00000425660 MS4A6AQ9H2W1 248 aa11.45□□□□□ -0.58
ACTB-204ENST00000425660 RNF114Q9Y508 228 aa11.45□□□□□ -0.58
ACTB-204ENST00000425660 M0QZ24 198 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 CRLF1O75462 422 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 SMUG1Q53HV7 270 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 RASL11AQ6T310 242 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 DLX4Q92988 240 aaPredicted RBP11.44□□□□□ -0.58
ACTB-204ENST00000425660 RAX2Q96IS3 184 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 CITED2Q99967 270 aaPredicted RBP11.44□□□□□ -0.58
ACTB-204ENST00000425660 IGKV3-7A0A075B6H7 116 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 ID1P41134 155 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 ZNF80P51504 273 aaPredicted RBP11.44□□□□□ -0.58
ACTB-204ENST00000425660 COX19Q49B96 90 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 OR2D3Q8NGH3 330 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 LINC00477Q96M19 166 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 DUX3Q96PT4 197 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 GNB1LQ9BYB4 327 aa11.44□□□□□ -0.58
ACTB-204ENST00000425660 C5orf52A6NGY3 159 aa11.43□□□□□ -0.58
ACTB-204ENST00000425660 K7EQG2 157 aa11.43□□□□□ -0.58
ACTB-204ENST00000425660 SH2D1AO60880 128 aa11.43□□□□□ -0.58
ACTB-204ENST00000425660 TRGC1P0CF51 173 aa11.43□□□□□ -0.58
ACTB-204ENST00000425660 ATP5L2Q7Z4Y8 100 aa11.43□□□□□ -0.58
ACTB-204ENST00000425660 C11orf44Q8N8P7 122 aa11.43□□□□□ -0.58
ACTB-204ENST00000425660 SAV1Q9H4B6 383 aaPredicted RBP11.43□□□□□ -0.58
ACTB-204ENST00000425660 TRAPPC1Q9Y5R8 145 aa11.43□□□□□ -0.58
ACTB-204ENST00000425660 FRMD6-AS1P0C7T7 363 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 SRSF2Q01130 221 aaKnown RBP11.42□□□□□ -0.58
ACTB-204ENST00000425660 HIST2H2BDQ6DRA6 164 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 OR8A1Q8NGG7 326 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 OR10J6PQ8NGY7 276 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 SELENOKQ9Y6D0 94 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 TRBV7-9A0A0J9YWB2 115 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 HAX1O00165 279 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 CCL24O00175 119 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 MT-ND6P03923 174 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 S100A6P06703 90 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 CSN3P07498 182 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 FABP9Q0Z7S8 132 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 WDR73Q6P4I2 378 aa11.42□□□□□ -0.58
ACTB-204ENST00000425660 RBPMS2Q6ZRY4 209 aaKnown RBP11.42□□□□□ -0.58
ACTB-204ENST00000425660 FAM19A4Q96LR4 140 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms