RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 H7BYZ3 331 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 PAX4O43316 350 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 ATP5G1P05496 136 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 PET100P0DJ07 73 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 IGLC2P0DOY2 106 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 ATP5G3P48201 142 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 FAM3BP58499 235 aaPredicted RBP6.63□□□□□ -1.35
NUP50-205ENST00000419387 CLINT1Q14677 625 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 KIR3DS1Q14943 382 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 GUK1Q16774 197 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 GCSAMLQ5JQS6 135 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 PFDN5Q99471 154 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 ATG101Q9BSB4 218 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 SSBP4Q9BWG4 385 aaPredicted RBP6.63□□□□□ -1.35
NUP50-205ENST00000419387 NPCDR1Q9BY65 106 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 PARD6GQ9BYG4 376 aaPredicted RBP6.63□□□□□ -1.35
NUP50-205ENST00000419387 SMIM3Q9BZL3 60 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 NOP10Q9NPE3 64 aaKnown RBP6.63□□□□□ -1.35
NUP50-205ENST00000419387 SLC39A9Q9NUM3 307 aa6.63□□□□□ -1.35
NUP50-205ENST00000419387 KIAA1109Q2LD37 5005 aa6.62□□□□□ -1.35
NUP50-205ENST00000419387 MPDU1O75352 247 aa6.62□□□□□ -1.35
NUP50-205ENST00000419387 NUDT3O95989 172 aa6.62□□□□□ -1.35
NUP50-205ENST00000419387 FGF7P21781 194 aa6.62□□□□□ -1.35
NUP50-205ENST00000419387 CD300CQ08708 224 aa6.62□□□□□ -1.35
NUP50-205ENST00000419387 SOHLH1Q5JUK2 328 aa6.62□□□□□ -1.35
NUP50-205ENST00000419387 CCDC28AQ8IWP9 274 aa6.62□□□□□ -1.35
NUP50-205ENST00000419387 RNASE8Q8TDE3 154 aaKnown RBP6.62□□□□□ -1.35
NUP50-205ENST00000419387 TMEM263Q8WUH6 116 aaKnown RBP6.62□□□□□ -1.35
NUP50-205ENST00000419387 ATP5SQ99766 215 aa6.62□□□□□ -1.35
NUP50-205ENST00000419387 CYTL1Q9NRR1 136 aa6.62□□□□□ -1.35
NUP50-205ENST00000419387 ZNF586Q9NXT0 402 aa6.62□□□□□ -1.35
NUP50-205ENST00000419387 HMSDA8MTL9 139 aa6.61□□□□□ -1.35
NUP50-205ENST00000419387 ZNF253O75346 499 aa6.61□□□□□ -1.35
NUP50-205ENST00000419387 CT45A10P0DMU9 189 aa6.61□□□□□ -1.35
NUP50-205ENST00000419387 LEPP41159 167 aa6.61□□□□□ -1.35
NUP50-205ENST00000419387 C1orf134Q5TEV5 83 aa6.61□□□□□ -1.35
NUP50-205ENST00000419387 GFI1BQ5VTD9 330 aa6.61□□□□□ -1.35
NUP50-205ENST00000419387 ODF3Q96PU9 254 aa6.61□□□□□ -1.35
NUP50-205ENST00000419387 TMEM14CQ9P0S9 112 aa6.61□□□□□ -1.35
NUP50-205ENST00000419387 TRBV19A0A075B6N1 114 aa6.6□□□□□ -1.35
NUP50-205ENST00000419387 NPIPB6E9PJ23 425 aa6.6□□□□□ -1.35
NUP50-205ENST00000419387 J3KRW8 73 aa6.6□□□□□ -1.35
NUP50-205ENST00000419387 HIST1H1EP10412 219 aaKnown RBP6.6□□□□□ -1.35
NUP50-205ENST00000419387 CCL18P55774 89 aa6.6□□□□□ -1.35
NUP50-205ENST00000419387 LINC00612Q8N6U2 182 aa6.6□□□□□ -1.35
NUP50-205ENST00000419387 ZNRF2Q8NHG8 242 aa6.6□□□□□ -1.35
NUP50-205ENST00000419387 RNF141Q8WVD5 230 aa6.6□□□□□ -1.35
NUP50-205ENST00000419387 MRPL53Q96EL3 112 aaKnown RBP6.6□□□□□ -1.35
NUP50-205ENST00000419387 ZNF503Q96F45 646 aa6.6□□□□□ -1.35
NUP50-205ENST00000419387 FAM167A-AS1Q96KT0 104 aa6.6□□□□□ -1.35
NUP50-205ENST00000419387 PRELID1Q9Y255 219 aa6.6□□□□□ -1.35
NUP50-205ENST00000419387 NACAE9PAV3 2078 aa6.6□□□□□ -1.35
NUP50-205ENST00000419387 FXYD6-FXYD2A0A087WZ82 144 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 TRAV12-3A0A0B4J271 114 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 SNURFLB1AK76 121 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 M0R3E3 92 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 NDUFB4O95168 129 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 MED14OSP0DP75 135 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 ERCC8Q13216 396 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 OR5I1Q13606 314 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 PDE6HQ13956 83 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 LGALSLQ3ZCW2 172 aaPredicted RBP6.59□□□□□ -1.35
NUP50-205ENST00000419387 RPL7L1Q6DKI1 246 aaKnown RBP6.59□□□□□ -1.35
NUP50-205ENST00000419387 TCTE3Q8IZS6 198 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 KCNRGQ8N5I3 272 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 LINC00477Q96M19 166 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 PYGO2Q9BRQ0 406 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 LINC00588Q9Y4M8 146 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 TIMM9Q9Y5J7 89 aa6.59□□□□□ -1.35
NUP50-205ENST00000419387 DNAH11Q96DT5 4516 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 DYNC1H1Q14204 4646 aaKnown RBP6.58□□□□□ -1.36
NUP50-205ENST00000419387 hCG_2014768A0A024R1R8 64 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 NBDYA0A0U1RRE5 68 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 GAGE12BA1L429 117 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 ARPC5O15511 151 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 GAGE7O76087 117 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 SLC25A5P05141 298 aaKnown RBP6.58□□□□□ -1.36
NUP50-205ENST00000419387 GAGE12FP0CL80 117 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 GAGE12GP0CL81 117 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 GAGE12IP0CL82 117 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 PYYP10082 97 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 ATP6V0CP27449 155 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 INO80EQ8NBZ0 244 aaPredicted RBP6.58□□□□□ -1.36
NUP50-205ENST00000419387 BLNKQ8WV28 456 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 GNPNAT1Q96EK6 184 aaPredicted RBP6.58□□□□□ -1.36
NUP50-205ENST00000419387 SH3BGRL3Q9H299 93 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 PKD1P98161 4303 aa6.58□□□□□ -1.36
NUP50-205ENST00000419387 PKHD1P08F94 4074 aa6.57□□□□□ -1.36
NUP50-205ENST00000419387 TRAV26-1A0A087WT03 109 aa6.57□□□□□ -1.36
NUP50-205ENST00000419387 C7orf71A4D174 169 aa6.57□□□□□ -1.36
NUP50-205ENST00000419387 EIF3GO75821 320 aaKnown RBP eCLIP6.57□□□□□ -1.36
NUP50-205ENST00000419387 IFNA5P01569 189 aa6.57□□□□□ -1.36
NUP50-205ENST00000419387 NBEAP1P0C6P0 100 aa6.57□□□□□ -1.36
NUP50-205ENST00000419387 M6PRP20645 277 aa6.57□□□□□ -1.36
NUP50-205ENST00000419387 DAZ2Q13117 558 aaKnown RBP6.57□□□□□ -1.36
NUP50-205ENST00000419387 ZNF345Q14585 488 aa6.57□□□□□ -1.36
NUP50-205ENST00000419387 MIR17HGQ75NE6 70 aa6.57□□□□□ -1.36
NUP50-205ENST00000419387 SSX7Q7RTT5 188 aa6.57□□□□□ -1.36
NUP50-205ENST00000419387 EXOC3-AS1Q8N2X6 119 aa6.57□□□□□ -1.36
NUP50-205ENST00000419387 RXFP4Q8TDU9 374 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms