RNA–Protein interactions for RNA: ENST00000410889.1

RNU4-27P-201, Transcript of RNA, U4 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU4-27P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-27P-201ENST00000410889 E7EQ34 232 aa0.85□□□□□ -2.27
RNU4-27P-201ENST00000410889 TPT1P13693 172 aaKnown RBP0.85□□□□□ -2.27
RNU4-27P-201ENST00000410889 S100A11P31949 105 aa0.85□□□□□ -2.27
RNU4-27P-201ENST00000410889 FOXA3P55318 350 aaPredicted RBP0.85□□□□□ -2.27
RNU4-27P-201ENST00000410889 CCL4L1Q8NHW4 92 aa0.85□□□□□ -2.27
RNU4-27P-201ENST00000410889 PRELID3AQ96N28 172 aa0.85□□□□□ -2.27
RNU4-27P-201ENST00000410889 C3orf85A0A1B0GTC6 90 aa0.84□□□□□ -2.27
RNU4-27P-201ENST00000410889 K7EIL1 84 aa0.84□□□□□ -2.27
RNU4-27P-201ENST00000410889 ZCCHC23Q6ZST2 131 aa0.84□□□□□ -2.27
RNU4-27P-201ENST00000410889 Q86TA4 180 aa0.84□□□□□ -2.27
RNU4-27P-201ENST00000410889 ATOH7Q8N100 152 aa0.84□□□□□ -2.27
RNU4-27P-201ENST00000410889 C5orf17Q8NAS9 161 aa0.84□□□□□ -2.27
RNU4-27P-201ENST00000410889 AP1S3Q96PC3 154 aa0.84□□□□□ -2.27
RNU4-27P-201ENST00000410889 LIMD2Q9BT23 127 aa0.84□□□□□ -2.27
RNU4-27P-201ENST00000410889 C10orf95Q9H7T3 257 aa0.84□□□□□ -2.27
RNU4-27P-201ENST00000410889 TAF9BQ9HBM6 251 aa0.84□□□□□ -2.27
RNU4-27P-201ENST00000410889 BCL9O00512 1426 aa0.83□□□□□ -2.28
RNU4-27P-201ENST00000410889 H7BYZ3 331 aa0.83□□□□□ -2.28
RNU4-27P-201ENST00000410889 FAM107AO95990 144 aa0.83□□□□□ -2.28
RNU4-27P-201ENST00000410889 S100A5P33763 92 aa0.83□□□□□ -2.28
RNU4-27P-201ENST00000410889 FXYD6P3P58550 94 aa0.83□□□□□ -2.28
RNU4-27P-201ENST00000410889 LINC00305Q7Z4B0 112 aa0.83□□□□□ -2.28
RNU4-27P-201ENST00000410889 ZCCHC11Q5TAX3 1644 aaKnown RBP0.82□□□□□ -2.28
RNU4-27P-201ENST00000410889 A0A1B0GV72 72 aa0.82□□□□□ -2.28
RNU4-27P-201ENST00000410889 A0A1W2PRE2 83 aa0.82□□□□□ -2.28
RNU4-27P-201ENST00000410889 PDE6GP18545 87 aa0.82□□□□□ -2.28
RNU4-27P-201ENST00000410889 Q6ZS92 163 aa0.82□□□□□ -2.28
RNU4-27P-201ENST00000410889 C10orf111Q8N326 155 aa0.82□□□□□ -2.28
RNU4-27P-201ENST00000410889 CLEC2BQ92478 149 aa0.82□□□□□ -2.28
RNU4-27P-201ENST00000410889 LXNQ9BS40 222 aa0.82□□□□□ -2.28
RNU4-27P-201ENST00000410889 KNTC1P50748 2209 aa0.82□□□□□ -2.28
RNU4-27P-201ENST00000410889 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
RNU4-27P-201ENST00000410889 SULT1C4O75897 302 aa0.81□□□□□ -2.28
RNU4-27P-201ENST00000410889 SAA1P0DJI8 122 aaPredicted RBP0.81□□□□□ -2.28
RNU4-27P-201ENST00000410889 SPINT3P49223 89 aa0.81□□□□□ -2.28
RNU4-27P-201ENST00000410889 MAXP61244 160 aa0.81□□□□□ -2.28
RNU4-27P-201ENST00000410889 RPL37AP61513 92 aaKnown RBP0.81□□□□□ -2.28
RNU4-27P-201ENST00000410889 RMND5BQ96G75 393 aaPredicted RBP0.81□□□□□ -2.28
RNU4-27P-201ENST00000410889 CIB3Q96Q77 187 aaPredicted RBP0.81□□□□□ -2.28
RNU4-27P-201ENST00000410889 CENPHQ9H3R5 247 aa0.81□□□□□ -2.28
RNU4-27P-201ENST00000410889 BBIP1A8MTZ0 92 aa0.8□□□□□ -2.28
RNU4-27P-201ENST00000410889 FABP1P07148 127 aa0.8□□□□□ -2.28
RNU4-27P-201ENST00000410889 KDELR1P24390 212 aa0.8□□□□□ -2.28
RNU4-27P-201ENST00000410889 CCL19Q99731 98 aa0.8□□□□□ -2.28
RNU4-27P-201ENST00000410889 TRAV13-1A0A0B4J241 112 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 TRBV27A0A0K0K1C4 114 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 ARL5CA6NH57 179 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 IGHV3-30P01768 117 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 IGHV3-30-5P0DP03 117 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 CCL4P13236 92 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 SRP9P49458 86 aaKnown RBP0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 ZNF137PP52743 207 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 TEX29Q8N6K0 151 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 TMEM229BQ8NBD8 167 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 JPT1Q9UK76 154 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 ANK1P16157 1881 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 DLC1Q96QB1 1528 aa0.79□□□□□ -2.28
RNU4-27P-201ENST00000410889 A0A0D9SG42 100 aa0.78□□□□□ -2.28
RNU4-27P-201ENST00000410889 LOC107984156A0A0G2JMH3 177 aa0.78□□□□□ -2.28
RNU4-27P-201ENST00000410889 LOC107986453A0A1B0GWG9 222 aa0.78□□□□□ -2.28
RNU4-27P-201ENST00000410889 H3BMG7 143 aa0.78□□□□□ -2.28
RNU4-27P-201ENST00000410889 C3orf62Q6ZUJ4 267 aa0.78□□□□□ -2.28
RNU4-27P-201ENST00000410889 ARL17AQ8IVW1 177 aa0.78□□□□□ -2.28
RNU4-27P-201ENST00000410889 THEM6Q8WUY1 208 aa0.78□□□□□ -2.28
RNU4-27P-201ENST00000410889 MED31Q9Y3C7 131 aa0.78□□□□□ -2.28
RNU4-27P-201ENST00000410889 KIAA1549LQ6ZVL6 1849 aa0.78□□□□□ -2.29
RNU4-27P-201ENST00000410889 ATG2AQ2TAZ0 1938 aa0.77□□□□□ -2.29
RNU4-27P-201ENST00000410889 APCP25054 2843 aa0.77□□□□□ -2.29
RNU4-27P-201ENST00000410889 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.77□□□□□ -2.29
RNU4-27P-201ENST00000410889 LSM3P62310 102 aaKnown RBP0.77□□□□□ -2.29
RNU4-27P-201ENST00000410889 C6orf52Q5T4I8 152 aa0.77□□□□□ -2.29
RNU4-27P-201ENST00000410889 HRCT1Q6UXD1 115 aa0.77□□□□□ -2.29
RNU4-27P-201ENST00000410889 IZUMO2Q6UXV1 221 aa0.77□□□□□ -2.29
RNU4-27P-201ENST00000410889 LPAR5Q9H1C0 372 aa0.77□□□□□ -2.29
RNU4-27P-201ENST00000410889 TRPM7Q96QT4 1865 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 A0A1W2PPB8 328 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 A0A1W2PRS3 328 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 A6NN06 94 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 KIR3DP1A8MWS1 328 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 IFNA21P01568 189 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 GYPBP06028 91 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 RPS3P23396 243 aaKnown RBP eCLIP0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 DNAJB13P59910 316 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 SNRPD3P62318 126 aaKnown RBP0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 TCTEX1D1Q8N7M0 179 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 PLAC4Q8WY50 150 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 NABP2Q9BQ15 211 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 FKBP11Q9NYL4 201 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 SMPXQ9UHP9 88 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 TRAPPC2LQ9UL33 140 aa0.76□□□□□ -2.29
RNU4-27P-201ENST00000410889 FER1L6Q2WGJ9 1857 aa0.75□□□□□ -2.29
RNU4-27P-201ENST00000410889 TCOF1Q13428 1488 aaKnown RBP0.75□□□□□ -2.29
RNU4-27P-201ENST00000410889 TRBV7-6A0A0J9YX20 115 aa0.75□□□□□ -2.29
RNU4-27P-201ENST00000410889 CAV3P56539 151 aa0.75□□□□□ -2.29
RNU4-27P-201ENST00000410889 TFAMQ00059 246 aaKnown RBP0.75□□□□□ -2.29
RNU4-27P-201ENST00000410889 CCSMST1Q4G0I0 132 aa0.75□□□□□ -2.29
RNU4-27P-201ENST00000410889 MORN4Q8NDC4 146 aa0.75□□□□□ -2.29
RNU4-27P-201ENST00000410889 OR9Q1Q8NGQ5 310 aa0.75□□□□□ -2.29
RNU4-27P-201ENST00000410889 MPC1Q9Y5U8 109 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms