RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 H3BRN7 92 aa13.85□□□□□ -0.19
NRXN1-209ENST00000405581 MPV17L2Q567V2 206 aa13.85□□□□□ -0.19
NRXN1-209ENST00000405581 FANCMQ8IYD8 2048 aa13.85□□□□□ -0.19
NRXN1-209ENST00000405581 A0A087X0K7 114 aa13.85□□□□□ -0.19
NRXN1-209ENST00000405581 TRAV8-3A0A0A6YYJ7 113 aa13.85□□□□□ -0.19
NRXN1-209ENST00000405581 CD5LO43866 347 aa13.85□□□□□ -0.19
NRXN1-209ENST00000405581 PRR25Q96S07 402 aa13.85□□□□□ -0.19
NRXN1-209ENST00000405581 ZNRD1Q9P1U0 126 aa13.85□□□□□ -0.19
NRXN1-209ENST00000405581 H3BMM0 161 aa13.85□□□□□ -0.19
NRXN1-209ENST00000405581 RPL32P62910 135 aaKnown RBP13.85□□□□□ -0.19
NRXN1-209ENST00000405581 KIR3DS1Q14943 382 aa13.85□□□□□ -0.19
NRXN1-209ENST00000405581 NKAPP1Q8N9T2 125 aa13.85□□□□□ -0.19
NRXN1-209ENST00000405581 SDHAF1A6NFY7 115 aa13.84□□□□□ -0.19
NRXN1-209ENST00000405581 PAX9P55771 341 aa13.84□□□□□ -0.19
NRXN1-209ENST00000405581 SNHG12Q9BXW3 62 aa13.84□□□□□ -0.19
NRXN1-209ENST00000405581 INAFM2P0DMQ5 153 aa13.84□□□□□ -0.19
NRXN1-209ENST00000405581 TMEM213A2RRL7 107 aa13.83□□□□□ -0.2
NRXN1-209ENST00000405581 OCIAD2Q56VL3 154 aa13.83□□□□□ -0.2
NRXN1-209ENST00000405581 MAPK1IP1LQ8NDC0 245 aa13.83□□□□□ -0.2
NRXN1-209ENST00000405581 ATP6V0BQ99437 205 aa13.83□□□□□ -0.2
NRXN1-209ENST00000405581 TMEM126AQ9H061 195 aa13.83□□□□□ -0.2
NRXN1-209ENST00000405581 C1orf147Q96MC9 270 aaPredicted RBP13.83□□□□□ -0.2
NRXN1-209ENST00000405581 GAGE12BA1L429 117 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 GAGE7O76087 117 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 GAGE12FP0CL80 117 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 GAGE12GP0CL81 117 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 GAGE12IP0CL82 117 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 PRR31Q5SQ13 230 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 KLK9Q9UKQ9 250 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 FAM215AQ9Y5M1 114 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 WDR81Q562E7 1941 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 POU2AF1Q16633 256 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 C8orf31Q8N9H6 132 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 IGHV7-4-1A0A0J9YVY3 117 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 ZNRF2Q8NHG8 242 aa13.82□□□□□ -0.2
NRXN1-209ENST00000405581 C15orf65H3BRN8 121 aa13.81□□□□□ -0.2
NRXN1-209ENST00000405581 WDR86Q86TI4 376 aa13.81□□□□□ -0.2
NRXN1-209ENST00000405581 NAA38Q9BRA0 125 aaKnown RBP13.81□□□□□ -0.2
NRXN1-209ENST00000405581 PIP4P1Q86T03 277 aa13.81□□□□□ -0.2
NRXN1-209ENST00000405581 C18orf32Q8TCD1 76 aa13.81□□□□□ -0.2
NRXN1-209ENST00000405581 K7EM74 188 aa13.81□□□□□ -0.2
NRXN1-209ENST00000405581 ANXA2RQ3ZCQ2 193 aa13.81□□□□□ -0.2
NRXN1-209ENST00000405581 WT1-ASQ06250 92 aa13.8□□□□□ -0.2
NRXN1-209ENST00000405581 C8orf49Q96NF6 230 aa13.8□□□□□ -0.2
NRXN1-209ENST00000405581 SOCS3O14543 225 aa13.8□□□□□ -0.2
NRXN1-209ENST00000405581 VWC2Q2TAL6 325 aa13.8□□□□□ -0.2
NRXN1-209ENST00000405581 ZNF48Q96MX3 618 aaPredicted RBP13.8□□□□□ -0.2
NRXN1-209ENST00000405581 THAP8Q8NA92 274 aa13.8□□□□□ -0.2
NRXN1-209ENST00000405581 TSC2P49815 1807 aa13.8□□□□□ -0.2
NRXN1-209ENST00000405581 PHF3Q92576 2039 aaKnown RBP13.79□□□□□ -0.2
NRXN1-209ENST00000405581 TRBV20-1A0A075B6N2 111 aa13.79□□□□□ -0.2
NRXN1-209ENST00000405581 DLEU1O43261 78 aa13.79□□□□□ -0.2
NRXN1-209ENST00000405581 CFHR3Q02985 330 aa13.79□□□□□ -0.2
NRXN1-209ENST00000405581 ZNF114Q8NC26 417 aa13.79□□□□□ -0.2
NRXN1-209ENST00000405581 IGHV3-16A0A0C4DH30 117 aa13.79□□□□□ -0.2
NRXN1-209ENST00000405581 A8MWP6 167 aa13.79□□□□□ -0.2
NRXN1-209ENST00000405581 ZNF625Q96I27 306 aaPredicted RBP13.79□□□□□ -0.2
NRXN1-209ENST00000405581 PYY3Q5JQD4 70 aa13.79□□□□□ -0.2
NRXN1-209ENST00000405581 C9JAW5 83 aa13.79□□□□□ -0.2
NRXN1-209ENST00000405581 IGLC1P0CG04 106 aa13.79□□□□□ -0.2
NRXN1-209ENST00000405581 ZNF407Q9C0G0 2248 aa13.78□□□□□ -0.2
NRXN1-209ENST00000405581 GAGE2AQ6NT46 116 aa13.78□□□□□ -0.2
NRXN1-209ENST00000405581 ZMAT4Q9H898 229 aa13.78□□□□□ -0.2
NRXN1-209ENST00000405581 DOCK8Q8NF50 2099 aa13.78□□□□□ -0.2
NRXN1-209ENST00000405581 HLA-DRB4P13762 266 aa13.77□□□□□ -0.2
NRXN1-209ENST00000405581 KLF5Q13887 457 aaPredicted RBP13.77□□□□□ -0.2
NRXN1-209ENST00000405581 PYGO2Q9BRQ0 406 aa13.77□□□□□ -0.2
NRXN1-209ENST00000405581 HLA-DRB4X5D2U9 266 aa13.77□□□□□ -0.2
NRXN1-209ENST00000405581 TP53BP1Q12888 1972 aaPredicted RBP13.77□□□□□ -0.2
NRXN1-209ENST00000405581 RBMY1FQ15415 496 aaKnown RBP13.77□□□□□ -0.21
NRXN1-209ENST00000405581 MRPL51Q4U2R6 128 aaKnown RBP13.77□□□□□ -0.21
NRXN1-209ENST00000405581 VPREB3Q9UKI3 123 aa13.77□□□□□ -0.21
NRXN1-209ENST00000405581 FOXI2Q6ZQN5 318 aa13.77□□□□□ -0.21
NRXN1-209ENST00000405581 SPANXA1Q9NS26 97 aa13.77□□□□□ -0.21
NRXN1-209ENST00000405581 IGKV1-39P01597 117 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 IGKV1D-39P04432 117 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 UBE2V1Q13404 147 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 DUX4L9Q6RFH8 374 aaPredicted RBP13.76□□□□□ -0.21
NRXN1-209ENST00000405581 C20orf78Q9BR46 151 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 SMIM2Q9BVW6 85 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 LENEPQ9Y5L5 61 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 PFN2P35080 140 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 STPG4Q8N801 248 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 OR11H6Q8NGC7 330 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 PTPRDP23468 1912 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 NLRC5Q86WI3 1866 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 HOXD3P31249 432 aaPredicted RBP13.76□□□□□ -0.21
NRXN1-209ENST00000405581 ZNF134P52741 427 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 GAGE6Q13070 117 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 TSSC4Q9Y5U2 329 aaPredicted RBP13.76□□□□□ -0.21
NRXN1-209ENST00000405581 TICRRQ7Z2Z1 1910 aa13.76□□□□□ -0.21
NRXN1-209ENST00000405581 HERVK_113P63121 156 aa13.75□□□□□ -0.21
NRXN1-209ENST00000405581 RHOHQ15669 191 aa13.75□□□□□ -0.21
NRXN1-209ENST00000405581 MRPL53Q96EL3 112 aaKnown RBP13.75□□□□□ -0.21
NRXN1-209ENST00000405581 C20orf144Q9BQM9 153 aa13.75□□□□□ -0.21
NRXN1-209ENST00000405581 PKIGQ9Y2B9 76 aa13.75□□□□□ -0.21
NRXN1-209ENST00000405581 IGHV2-5P01817 119 aa13.75□□□□□ -0.21
NRXN1-209ENST00000405581 C11orf52Q96A22 123 aa13.75□□□□□ -0.21
NRXN1-209ENST00000405581 NDUFA12Q9UI09 145 aa13.75□□□□□ -0.21
NRXN1-209ENST00000405581 TANC1Q9C0D5 1861 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms