RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 NDUFA6P56556 154 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 TFAMQ00059 246 aaKnown RBP0.63□□□□□ -2.31
CD47-203ENST00000398258 CIRBPQ14011 172 aaKnown RBP0.63□□□□□ -2.31
CD47-203ENST00000398258 VMA21Q3ZAQ7 101 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 SAMD13Q5VXD3 122 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 LINC00305Q7Z4B0 112 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.63□□□□□ -2.31
CD47-203ENST00000398258 OR5H6Q8NGV6 325 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 ZNF431Q8TF32 576 aaPredicted RBP0.63□□□□□ -2.31
CD47-203ENST00000398258 DDA1Q9BW61 102 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 TCEAL2Q9H3H9 227 aaPredicted RBP0.63□□□□□ -2.31
CD47-203ENST00000398258 TMEM138Q9NPI0 162 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 KIF21BO75037 1637 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 NEXMIFQ5QGS0 1516 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 DISP2A7MBM2 1401 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 C10orf71Q711Q0 1435 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 UACAQ9BZF9 1416 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 NCOA3Q9Y6Q9 1424 aa0.63□□□□□ -2.31
CD47-203ENST00000398258 KIF21AQ7Z4S6 1674 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 RIMS1Q86UR5 1692 aaKnown RBP0.62□□□□□ -2.31
CD47-203ENST00000398258 CEP192Q8TEP8 1941 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 UHRF1BP1LA0JNW5 1464 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 ATP10BO94823 1461 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 ERVK-7P63135 1459 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 ZNF518AQ6AHZ1 1483 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 NLRP1Q9C000 1473 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 CHD1O14646 1710 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 BCORL1Q5H9F3 1711 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 NCOA6Q14686 2063 aaPredicted RBP0.62□□□□□ -2.31
CD47-203ENST00000398258 C5orf58C9J3I9 102 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 H3BMG7 143 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 COX7CP15954 63 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 POLR2HP52434 150 aaKnown RBP0.62□□□□□ -2.31
CD47-203ENST00000398258 MRPS36P82909 103 aaKnown RBP0.62□□□□□ -2.31
CD47-203ENST00000398258 PSG9Q00887 426 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 DR1Q01658 176 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 MIR22HGQ0VDD5 57 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 DIAPH2-AS1Q14236 149 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 LINC00322Q6ZN03 302 aaPredicted RBP0.62□□□□□ -2.31
CD47-203ENST00000398258 TAC4Q86UU9 113 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 OR5AS1Q8N127 324 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 DEFB123Q8N688 67 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 TMEM35BQ8NCS4 154 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 OR4B1Q8NGF8 309 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 OR9Q1Q8NGQ5 310 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 PRELID3AQ96N28 172 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 CCDC115Q96NT0 180 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 OR4C12Q96R67 309 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 WFDC10AQ9H1F0 79 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 FKBP11Q9NYL4 201 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 TPRKBQ9Y3C4 175 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 MED31Q9Y3C7 131 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 KIAA1549Q9HCM3 1950 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 AGLP35573 1532 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 ATP7AQ04656 1500 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 LAMB4A4D0S4 1761 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 TECPR2O15040 1411 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 PPIP5K1Q6PFW1 1433 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 KIAA1107Q9UPP5 1409 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 TET3O43151 1660 aa0.62□□□□□ -2.31
CD47-203ENST00000398258 CEP170BQ9Y4F5 1589 aaPredicted RBP0.62□□□□□ -2.31
CD47-203ENST00000398258 NUP98P52948 1817 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 PZPP20742 1482 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 PLEKHH2Q8IVE3 1493 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 TNRC6AQ8NDV7 1962 aaKnown RBP0.61□□□□□ -2.31
CD47-203ENST00000398258 SCN8AQ9UQD0 1980 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 UNC13CQ8NB66 2214 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 ARHGEF10O15013 1369 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 ZCCHC11Q5TAX3 1644 aaKnown RBP0.61□□□□□ -2.31
CD47-203ENST00000398258 MAP3K4Q9Y6R4 1608 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 URB2Q14146 1524 aaKnown RBP0.61□□□□□ -2.31
CD47-203ENST00000398258 EHBP1L1Q8N3D4 1523 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 ARHGEF12Q9NZN5 1544 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 TRAV23DV6A0A075B6W5 121 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 A0A096LPI6 279 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 TRAV13-1A0A0B4J241 112 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 LOC107984156A0A0G2JMH3 177 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 TSTD3H0UI37 97 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 M0QZK8 103 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 TPT1P13693 172 aaKnown RBP0.61□□□□□ -2.31
CD47-203ENST00000398258 FABP4P15090 132 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 RPS3P23396 243 aaKnown RBP eCLIP0.61□□□□□ -2.31
CD47-203ENST00000398258 FOXA3P55318 350 aaPredicted RBP0.61□□□□□ -2.31
CD47-203ENST00000398258 DEFB132Q7Z7B7 95 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 ARL17AQ8IVW1 177 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 DIRC1Q969H9 104 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 LXNQ9BS40 222 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 TNFSF18Q9UNG2 199 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 OVOS2A0A0G2JMS6 1433 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 OVOS2A0A0J9YW53 1432 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 OVOS2Q6IE36 1432 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 MROH2BQ7Z745 1585 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 PEG3Q9GZU2 1588 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 UGGT1Q9NYU2 1555 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 DIP2CQ9Y2E4 1556 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 DOCK4Q8N1I0 1966 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 SPHKAPQ2M3C7 1700 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 CCDC141Q6ZP82 1450 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 BCL9LQ86UU0 1499 aa0.61□□□□□ -2.31
CD47-203ENST00000398258 MYO3AQ8NEV4 1616 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms