RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ZNF138P52744 262 aa14.28□□□□□ -0.12
TSPAN4-204ENST00000397404 C9orf66Q5T8R8 295 aa14.28□□□□□ -0.12
TSPAN4-204ENST00000397404 ODF3Q96PU9 254 aa14.28□□□□□ -0.12
TSPAN4-204ENST00000397404 OSTCQ9NRP0 149 aa14.28□□□□□ -0.12
TSPAN4-204ENST00000397404 SMCO4Q9NRQ5 59 aa14.28□□□□□ -0.12
TSPAN4-204ENST00000397404 ZNF492Q9P255 531 aa14.28□□□□□ -0.12
TSPAN4-204ENST00000397404 IGKV3-7A0A075B6H7 116 aa14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 ZNF705FA8MVS1 300 aaPredicted RBP14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 NPIPB6E9PJ23 425 aa14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 DUSP14O95147 198 aaKnown RBP14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 IGLV2-8P01709 118 aa14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 EBLN2Q6P2I7 272 aa14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 FOXI2Q6ZQN5 318 aa14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 PRNTQ86SH4 94 aa14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 GBGT1Q8N5D6 347 aa14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 OR8A1Q8NGG7 326 aa14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 PRR25Q96S07 402 aa14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 IMMP2LQ96T52 175 aa14.27□□□□□ -0.12
TSPAN4-204ENST00000397404 IGKV2-40A0A087WW87 121 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-204ENST00000397404 IGKV2D-40P01614 121 aaPredicted RBP14.26□□□□□ -0.13
TSPAN4-204ENST00000397404 HLA-DMBP28068 263 aa14.26□□□□□ -0.13
TSPAN4-204ENST00000397404 WFDC9Q8NEX5 89 aa14.26□□□□□ -0.13
TSPAN4-204ENST00000397404 BTF3L4Q96K17 158 aa14.26□□□□□ -0.13
TSPAN4-204ENST00000397404 MGST1P10620 155 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 IGFL4Q6B9Z1 124 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 WFDC3Q8IUB2 231 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 C20orf173Q96LM9 149 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 WNK1Q9H4A3 2382 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 TRAV8-1A0A0A6YYK1 113 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 H7BYZ3 331 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 ERVFC1-1P60608 527 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 RNF212Q495C1 297 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 SMUG1Q53HV7 270 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 PSMG4Q5JS54 123 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 IBA57Q5T440 356 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 OR4B1Q8NGF8 309 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 OR10G8Q8NGN5 311 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 DAZAP1Q96EP5 407 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 VGLL1Q99990 258 aa14.25□□□□□ -0.13
TSPAN4-204ENST00000397404 K7EN84 100 aa14.24□□□□□ -0.13
TSPAN4-204ENST00000397404 ZNF688P0C7X2 276 aa14.24□□□□□ -0.13
TSPAN4-204ENST00000397404 CT83Q5H943 113 aa14.24□□□□□ -0.13
TSPAN4-204ENST00000397404 HIST2H2BDQ6DRA6 164 aa14.24□□□□□ -0.13
TSPAN4-204ENST00000397404 AGPAT4-IT1Q9H0P7 198 aa14.24□□□□□ -0.13
TSPAN4-204ENST00000397404 ZNF256Q9Y2P7 627 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-204ENST00000397404 PRAC2D3DTV9 90 aa14.23□□□□□ -0.13
TSPAN4-204ENST00000397404 TFPI2P48307 235 aa14.23□□□□□ -0.13
TSPAN4-204ENST00000397404 ATRAIDQ6UW56 229 aa14.23□□□□□ -0.13
TSPAN4-204ENST00000397404 CLUHP3Q96NS8 147 aa14.23□□□□□ -0.13
TSPAN4-204ENST00000397404 ASCL2Q99929 193 aa14.23□□□□□ -0.13
TSPAN4-204ENST00000397404 SAV1Q9H4B6 383 aaPredicted RBP14.23□□□□□ -0.13
TSPAN4-204ENST00000397404 A0A0J9YX75 114 aa14.22□□□□□ -0.13
TSPAN4-204ENST00000397404 PGPEP1LA6NFU8 196 aa14.22□□□□□ -0.13
TSPAN4-204ENST00000397404 CD33P20138 364 aa14.22□□□□□ -0.13
TSPAN4-204ENST00000397404 S100PP25815 95 aa14.22□□□□□ -0.13
TSPAN4-204ENST00000397404 RPL19P84098 196 aaKnown RBP14.22□□□□□ -0.13
TSPAN4-204ENST00000397404 KCNIP4Q6PIL6 250 aa14.22□□□□□ -0.13
TSPAN4-204ENST00000397404 TENM1Q9UKZ4 2725 aa14.22□□□□□ -0.13
TSPAN4-204ENST00000397404 TRAV9-1A0A075B6T8 112 aa14.21□□□□□ -0.13
TSPAN4-204ENST00000397404 WIPF1O43516 503 aa14.21□□□□□ -0.13
TSPAN4-204ENST00000397404 CRISP2P16562 243 aa14.21□□□□□ -0.13
TSPAN4-204ENST00000397404 TSPOP30536 169 aa14.21□□□□□ -0.13
TSPAN4-204ENST00000397404 FAM162BQ5T6X4 162 aa14.21□□□□□ -0.13
TSPAN4-204ENST00000397404 ZMAT5Q9UDW3 170 aaKnown RBP14.21□□□□□ -0.13
TSPAN4-204ENST00000397404 XKRY2A2RUG3 117 aa14.2□□□□□ -0.14
TSPAN4-204ENST00000397404 FAM231BA6NCW3 169 aa14.2□□□□□ -0.14
TSPAN4-204ENST00000397404 P01737 135 aa14.2□□□□□ -0.14
TSPAN4-204ENST00000397404 HIST1H1AQ02539 215 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-204ENST00000397404 SGK494Q96LW2 274 aa14.2□□□□□ -0.14
TSPAN4-204ENST00000397404 C19orf71A6NCJ1 209 aa14.19□□□□□ -0.14
TSPAN4-204ENST00000397404 OR11H12B2RN74 326 aa14.19□□□□□ -0.14
TSPAN4-204ENST00000397404 HLA-DRB4P13762 266 aa14.19□□□□□ -0.14
TSPAN4-204ENST00000397404 LEPP41159 167 aa14.19□□□□□ -0.14
TSPAN4-204ENST00000397404 BEAN1Q3B7T3 259 aa14.19□□□□□ -0.14
TSPAN4-204ENST00000397404 APRG1Q8IVJ8 170 aa14.19□□□□□ -0.14
TSPAN4-204ENST00000397404 FAM19A4Q96LR4 140 aa14.19□□□□□ -0.14
TSPAN4-204ENST00000397404 HLA-DRB4X5D2U9 266 aa14.19□□□□□ -0.14
TSPAN4-204ENST00000397404 A8MTW9 85 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 FABP5P3A8MUU1 101 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 GATCO43716 136 aaKnown RBP14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 OR5I1Q13606 314 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 MAP6D1Q9H9H5 199 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 AURKAIP1Q9NWT8 199 aaPredicted RBP14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 ZNF705GA8MUZ8 300 aaPredicted RBP14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 PFN1P07737 140 aaKnown RBP14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 DEFB131AP59861 70 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 RPS20P60866 119 aaKnown RBP14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 ERCC8Q13216 396 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 PRR27Q6MZM9 219 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 FAM24BQ8N5W8 94 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 NHLRC2Q8NBF2 726 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 NUDT10Q8NFP7 164 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 NUDT11Q96G61 164 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 ZC2HC1AQ96GY0 325 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 GFRA4Q9GZZ7 299 aa14.18□□□□□ -0.14
TSPAN4-204ENST00000397404 A8MWL6 223 aa14.17□□□□□ -0.14
TSPAN4-204ENST00000397404 BTN1A1Q13410 526 aa14.17□□□□□ -0.14
TSPAN4-204ENST00000397404 RPP21Q9H633 154 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-204ENST00000397404 IL36BQ9NZH7 164 aa14.17□□□□□ -0.14
TSPAN4-204ENST00000397404 V9GYV3 84 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms