RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SNRPD3P62318 126 aaKnown RBP3.18□□□□□ -1.9
GABPB1-204ENST00000396464 DYNLT1P63172 113 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 SUPT4H1P63272 117 aaKnown RBP3.18□□□□□ -1.9
GABPB1-204ENST00000396464 BTG2P78543 158 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 HSD52Q0P140 79 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 TMEM155Q4W5P6 130 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 PATE2Q6UY27 113 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 KRTAP7-1Q8IUC3 87 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 C1orf64Q8NEQ6 169 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 DIRC1Q969H9 104 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 RERGLQ9H628 205 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 DNAJC15Q9Y5T4 150 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 MPC1Q9Y5U8 109 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 OBSL1O75147 1896 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 CCDC88AQ3V6T2 1871 aa3.18□□□□□ -1.9
GABPB1-204ENST00000396464 LRRC37AA6NMS7 1700 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 RIC1Q4ADV7 1423 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 C7orf71A4D174 169 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 FNDC10F2Z333 226 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 H3BQ85 93 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 HBDP02042 147 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 TRGC1P0CF51 173 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 HIST1H1BP16401 226 aaKnown RBP3.17□□□□□ -1.9
GABPB1-204ENST00000396464 RPL28P46779 137 aaKnown RBP3.17□□□□□ -1.9
GABPB1-204ENST00000396464 TPPP2P59282 170 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 FOXF1Q12946 379 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 GTSCR1Q86UQ5 136 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 GKN2Q86XP6 184 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 ABCA7Q8IZY2 2146 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 OR10P1Q8NGE3 313 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 MIEN1Q9BRT3 115 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 SNRNP25Q9BV90 132 aaKnown RBP3.17□□□□□ -1.9
GABPB1-204ENST00000396464 DUOX1Q9NRD9 1551 aa3.17□□□□□ -1.9
GABPB1-204ENST00000396464 ARFGEF1Q9Y6D6 1849 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 K7EM74 188 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 PHOX2AO14813 284 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 CREBL2O60519 120 aaPredicted RBP3.16□□□□□ -1.9
GABPB1-204ENST00000396464 TCL1BO95988 128 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.16□□□□□ -1.9
GABPB1-204ENST00000396464 Q6ZQT7 251 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 AAED1Q7RTV5 226 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 Q8NDZ9 215 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 PKMYT1Q99640 499 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 GFRA4Q9GZZ7 299 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 DUSP21Q9H596 190 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 ZNF443Q9Y2A4 671 aaPredicted RBP3.16□□□□□ -1.9
GABPB1-204ENST00000396464 IER3IP1Q9Y5U9 82 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 SLX4Q8IY92 1834 aa3.16□□□□□ -1.9
GABPB1-204ENST00000396464 ARHGAP21Q5T5U3 1957 aa3.15□□□□□ -1.9
GABPB1-204ENST00000396464 CABIN1Q9Y6J0 2220 aa3.15□□□□□ -1.9
GABPB1-204ENST00000396464 SYNGR2O43760 224 aa3.15□□□□□ -1.91
GABPB1-204ENST00000396464 HIST1H1DP16402 221 aaKnown RBP3.15□□□□□ -1.91
GABPB1-204ENST00000396464 CD24P25063 80 aa3.15□□□□□ -1.91
GABPB1-204ENST00000396464 CATR1Q13166 79 aa3.15□□□□□ -1.91
GABPB1-204ENST00000396464 CDK5R1Q15078 307 aa3.15□□□□□ -1.91
GABPB1-204ENST00000396464 KHDC3LQ587J8 217 aa3.15□□□□□ -1.91
GABPB1-204ENST00000396464 COL5A1-AS1Q5SY13 56 aa3.15□□□□□ -1.91
GABPB1-204ENST00000396464 RPRMLQ8N4K4 120 aa3.15□□□□□ -1.91
GABPB1-204ENST00000396464 OR4B1Q8NGF8 309 aa3.15□□□□□ -1.91
GABPB1-204ENST00000396464 MCEEQ96PE7 176 aa3.15□□□□□ -1.91
GABPB1-204ENST00000396464 LSM2Q9Y333 95 aaKnown RBP3.15□□□□□ -1.91
GABPB1-204ENST00000396464 KIAA1551Q9HCM1 1747 aa3.15□□□□□ -1.91
GABPB1-204ENST00000396464 COL2A1P02458 1487 aaPredicted RBP3.15□□□□□ -1.91
GABPB1-204ENST00000396464 NCKAP5O14513 1909 aa3.15□□□□□ -1.91
GABPB1-204ENST00000396464 SCN1AP35498 2009 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 LAMB1P07942 1786 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 MYH8P13535 1937 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.14□□□□□ -1.91
GABPB1-204ENST00000396464 MPC2O95563 127 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 IGHV3-53P01767 116 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 IGLV7-43P04211 117 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 CD2P06729 351 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 MSMBP08118 114 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 GZMBP10144 247 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 ZNF19P17023 458 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 S100A10P60903 97 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 TMEM258P61165 79 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 ZNF117Q03924 483 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 EBI3Q14213 229 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 CLLU1Q5K131 121 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 IGFL3Q6UXB1 125 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 DPPA3Q6W0C5 159 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 C4orf33Q8N1A6 199 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 KCNRGQ8N5I3 272 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 AQP3Q92482 292 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 FGF13Q92913 245 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 ASF1BQ9NVP2 202 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 FKBP11Q9NYL4 201 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 SMAD5-AS1Q9Y6J3 95 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 COL4A1P02462 1669 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 SBF1O95248 1867 aa3.14□□□□□ -1.91
GABPB1-204ENST00000396464 GOLGB1Q14789 3259 aaKnown RBP3.13□□□□□ -1.91
GABPB1-204ENST00000396464 ATG2AQ2TAZ0 1938 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 DOCK2Q92608 1830 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 TRAV12-2A0A075B6T6 113 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 A0A0D9SG52 128 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 A0A1B0GVY2 172 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 PANO1I0J062 215 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 OR1I1O60431 355 aa3.13□□□□□ -1.91
GABPB1-204ENST00000396464 KLF7O75840 302 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms