RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 A0A087WWL8 130 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 C5orf63A6NC05 138 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 HOXD3P31249 432 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-204ENST00000395898 Q5PR19 223 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 KAAG1Q9UBP8 84 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 RNF223E7ERA6 249 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 NDUFS6O75380 124 aaKnown RBP4.38□□□□□ -1.71
VPS13C-204ENST00000395898 LY6HO94772 140 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 AZU1P20160 251 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 PMVKQ15126 192 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 HS3ST6Q96QI5 342 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 MED13LQ71F56 2210 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 A8MWP6 167 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 DEFB130BP0DP73 79 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 DEFB130AP0DP74 79 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 C8orf86Q6ZUL3 223 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 DMRTC2Q8IXT2 367 aaPredicted RBP4.38□□□□□ -1.71
VPS13C-204ENST00000395898 Q96MF0 132 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 KLHDC3Q9BQ90 382 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 DAD1P61803 113 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 TCTEX1D4Q5JR98 221 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 TRBV19A0A075B6N1 114 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 C17orf58Q2M2W7 97 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 E9PQ18 207 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 KIR3DS1Q14943 382 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 SPINK13Q1W4C9 94 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 LTBP2Q14767 1821 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 UBE2V1Q13404 147 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 FAM104BQ5XKR9 115 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 NUP210LQ5VU65 1888 aa4.38□□□□□ -1.71
VPS13C-204ENST00000395898 H3BUA1 57 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 CD5LO43866 347 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 INAFM2P0DMQ5 153 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 PLA2G2CQ5R387 149 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 ATP6V0BQ99437 205 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 SSBP2P81877 361 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-204ENST00000395898 FHL1Q13642 323 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 LINC00479Q96M42 142 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 ANAPC10Q9UM13 185 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 DKK1O94907 266 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 MLANAQ16655 118 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 C1orf122Q6ZSJ8 110 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 TP53TG1Q9Y2A0 90 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 SMIM27A0A1W2PRY6 76 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 ZMAT4Q9H898 229 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 RPL32P62910 135 aaKnown RBP4.37□□□□□ -1.71
VPS13C-204ENST00000395898 PRR25Q96S07 402 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 WNK1Q9H4A3 2382 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 IGLV3-9A0A075B6K5 115 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 FAM231DQ6ZW35 169 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 RNF144BQ7Z419 303 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 C8orf31Q8N9H6 132 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 RIPPLY3P57055 190 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 MPV17L2Q567V2 206 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 RMI2Q96E14 147 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 GOLGB1Q14789 3259 aaKnown RBP4.37□□□□□ -1.71
VPS13C-204ENST00000395898 TRAV8-3A0A0A6YYJ7 113 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 MST1LQ2TV78 715 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 OCIAD2Q56VL3 154 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 IGHV1OR15-1A0A075B7D0 117 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 BOD1L2Q8IYS8 172 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 Q8N8P6 123 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 THAP8Q8NA92 274 aa4.37□□□□□ -1.71
VPS13C-204ENST00000395898 IGKV1-6A0A0C4DH72 117 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 SMKR1H3BMG3 65 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 DLEU1O43261 78 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 ZNF124Q15973 351 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 PAX9P55771 341 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 RUSC1-AS1Q66K80 236 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 F5H768 121 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 EREGO14944 169 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 PYY3Q5JQD4 70 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 PROK2Q9HC23 129 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 ZNF581Q9P0T4 197 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 XCL2Q9UBD3 114 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 ZNF134P52741 427 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 C2orf66Q6UXQ4 117 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 EDA2RQ9HAV5 297 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 H3BRN7 92 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 TMEM243Q9BU79 118 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 SNHG12Q9BXW3 62 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 PKIGQ9Y2B9 76 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 LENEPQ9Y5L5 61 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 EP400Q96L91 3159 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 RBMY1FQ15415 496 aaKnown RBP4.36□□□□□ -1.71
VPS13C-204ENST00000395898 TSSC4Q9Y5U2 329 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-204ENST00000395898 C9JAW5 83 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 K7EM74 188 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 SOCS3O14543 225 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 NKAPP1Q8N9T2 125 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 C8orf49Q96NF6 230 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 COX11Q9Y6N1 276 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 OR11H6Q8NGC7 330 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 C18orf32Q8TCD1 76 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 DSCR8Q96T75 97 aa4.36□□□□□ -1.71
VPS13C-204ENST00000395898 SDHAF1A6NFY7 115 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 HERVK_113P63121 156 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 LGALS9BQ3B8N2 356 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 IGFL4Q6B9Z1 124 aa4.35□□□□□ -1.71
VPS13C-204ENST00000395898 LGALS9CQ6DKI2 356 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms