RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 BAGE2Q86Y30 109 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 C15orf54Q8N8G6 183 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 LINC00477Q96M19 166 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 LINC00479Q96M42 142 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 CTDSP1Q9GZU7 261 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 SELENOKQ9Y6D0 94 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 CXorf65A6NEN9 183 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 COLCA2A8K830 154 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 K7EN84 100 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 ZNF688P0C7X2 276 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 HLA-DMBP28068 263 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 YPEL4Q96NS1 127 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 PSG8Q9UQ74 426 aa10.26□□□□□ -0.77
VAPB-202ENST00000395802 LTAP01374 205 aa10.25□□□□□ -0.77
VAPB-202ENST00000395802 IGLV2-8P01709 118 aa10.25□□□□□ -0.77
VAPB-202ENST00000395802 MT-ND4LP03901 98 aa10.25□□□□□ -0.77
VAPB-202ENST00000395802 C9orf47Q6ZRZ4 202 aa10.25□□□□□ -0.77
VAPB-202ENST00000395802 LURAP1LQ8IV03 231 aa10.25□□□□□ -0.77
VAPB-202ENST00000395802 C20orf173Q96LM9 149 aa10.25□□□□□ -0.77
VAPB-202ENST00000395802 PPP1R14DQ9NXH3 145 aa10.25□□□□□ -0.77
VAPB-202ENST00000395802 TMA7Q9Y2S6 64 aaKnown RBP10.25□□□□□ -0.77
VAPB-202ENST00000395802 LENEPQ9Y5L5 61 aa10.25□□□□□ -0.77
VAPB-202ENST00000395802 TRAV34A0A0B4J273 112 aa10.24□□□□□ -0.77
VAPB-202ENST00000395802 DUSP14O95147 198 aaKnown RBP10.24□□□□□ -0.77
VAPB-202ENST00000395802 RIPPLY3P57055 190 aa10.24□□□□□ -0.77
VAPB-202ENST00000395802 FOXI2Q6ZQN5 318 aa10.24□□□□□ -0.77
VAPB-202ENST00000395802 PRNTQ86SH4 94 aa10.24□□□□□ -0.77
VAPB-202ENST00000395802 Q86TA4 180 aa10.24□□□□□ -0.77
VAPB-202ENST00000395802 OR8A1Q8NGG7 326 aa10.24□□□□□ -0.77
VAPB-202ENST00000395802 ANAPC16Q96DE5 110 aa10.24□□□□□ -0.77
VAPB-202ENST00000395802 FAM110AQ9BQ89 295 aa10.24□□□□□ -0.77
VAPB-202ENST00000395802 ZMAT5Q9UDW3 170 aaKnown RBP10.24□□□□□ -0.77
VAPB-202ENST00000395802 ZNF256Q9Y2P7 627 aaPredicted RBP10.24□□□□□ -0.77
VAPB-202ENST00000395802 IGKV2-40A0A087WW87 121 aaPredicted RBP10.23□□□□□ -0.77
VAPB-202ENST00000395802 TRBV7-9A0A0J9YWB2 115 aa10.23□□□□□ -0.77
VAPB-202ENST00000395802 IGKV2D-40P01614 121 aaPredicted RBP10.23□□□□□ -0.77
VAPB-202ENST00000395802 IGLV2-11P01706 119 aa10.23□□□□□ -0.77
VAPB-202ENST00000395802 TMEM183AQ8IXX5 376 aa10.23□□□□□ -0.77
VAPB-202ENST00000395802 SFRP2Q96HF1 295 aa10.23□□□□□ -0.77
VAPB-202ENST00000395802 TRAV8-1A0A0A6YYK1 113 aa10.23□□□□□ -0.77
VAPB-202ENST00000395802 CT45A10P0DMU9 189 aa10.23□□□□□ -0.77
VAPB-202ENST00000395802 ZNF138P52744 262 aa10.23□□□□□ -0.77
VAPB-202ENST00000395802 ELOBQ15370 118 aa10.23□□□□□ -0.77
VAPB-202ENST00000395802 PRR31Q5SQ13 230 aa10.23□□□□□ -0.77
VAPB-202ENST00000395802 FAM24BQ8N5W8 94 aa10.23□□□□□ -0.77
VAPB-202ENST00000395802 STAB1Q9NY15 2570 aa10.22□□□□□ -0.77
VAPB-202ENST00000395802 OR11H12B2RN74 326 aa10.22□□□□□ -0.77
VAPB-202ENST00000395802 PRAC2D3DTV9 90 aa10.22□□□□□ -0.77
VAPB-202ENST00000395802 NPIPB6E9PJ23 425 aa10.22□□□□□ -0.77
VAPB-202ENST00000395802 H7BYZ3 331 aa10.22□□□□□ -0.77
VAPB-202ENST00000395802 MGST1P10620 155 aaKnown RBP10.22□□□□□ -0.77
VAPB-202ENST00000395802 HIST1H1AQ02539 215 aaPredicted RBP10.22□□□□□ -0.77
VAPB-202ENST00000395802 SGK494Q96LW2 274 aa10.22□□□□□ -0.77
VAPB-202ENST00000395802 VGLL1Q99990 258 aa10.22□□□□□ -0.77
VAPB-202ENST00000395802 SAV1Q9H4B6 383 aaPredicted RBP10.22□□□□□ -0.77
VAPB-202ENST00000395802 ZNF492Q9P255 531 aa10.22□□□□□ -0.77
VAPB-202ENST00000395802 URGCP-MRPS24S4R325 110 aa10.22□□□□□ -0.77
VAPB-202ENST00000395802 IZUMO1RA6ND01 250 aa10.21□□□□□ -0.77
VAPB-202ENST00000395802 WIPF1O43516 503 aa10.21□□□□□ -0.77
VAPB-202ENST00000395802 GCGP01275 180 aa10.21□□□□□ -0.77
VAPB-202ENST00000395802 DEFB131AP59861 70 aa10.21□□□□□ -0.77
VAPB-202ENST00000395802 GTSCR1Q86UQ5 136 aa10.21□□□□□ -0.77
VAPB-202ENST00000395802 PRR25Q96S07 402 aa10.21□□□□□ -0.77
VAPB-202ENST00000395802 AGPAT4-IT1Q9H0P7 198 aa10.21□□□□□ -0.77
VAPB-202ENST00000395802 MAP6D1Q9H9H5 199 aa10.21□□□□□ -0.77
VAPB-202ENST00000395802 A0A0J9YX75 114 aa10.21□□□□□ -0.78
VAPB-202ENST00000395802 PPP1R2P9O14990 202 aa10.21□□□□□ -0.78
VAPB-202ENST00000395802 OR5I1Q13606 314 aa10.21□□□□□ -0.78
VAPB-202ENST00000395802 BEAN1Q3B7T3 259 aa10.21□□□□□ -0.78
VAPB-202ENST00000395802 NHLRC2Q8NBF2 726 aa10.21□□□□□ -0.78
VAPB-202ENST00000395802 ODF3Q96PU9 254 aa10.21□□□□□ -0.78
VAPB-202ENST00000395802 MLST8Q9BVC4 326 aa10.21□□□□□ -0.78
VAPB-202ENST00000395802 SMUG1Q53HV7 270 aa10.2□□□□□ -0.78
VAPB-202ENST00000395802 COX8CQ7Z4L0 72 aa10.2□□□□□ -0.78
VAPB-202ENST00000395802 DAZAP1Q96EP5 407 aaKnown RBP10.2□□□□□ -0.78
VAPB-202ENST00000395802 PFN1P07737 140 aaKnown RBP10.19□□□□□ -0.78
VAPB-202ENST00000395802 TSPOP30536 169 aa10.19□□□□□ -0.78
VAPB-202ENST00000395802 ERVFC1-1P60608 527 aa10.19□□□□□ -0.78
VAPB-202ENST00000395802 ERCC8Q13216 396 aa10.19□□□□□ -0.78
VAPB-202ENST00000395802 OR10G8Q8NGN5 311 aa10.19□□□□□ -0.78
VAPB-202ENST00000395802 TRRAPQ9Y4A5 3859 aa10.19□□□□□ -0.78
VAPB-202ENST00000395802 CXCL1P09341 107 aa10.19□□□□□ -0.78
VAPB-202ENST00000395802 HLA-DRB4P13762 266 aa10.19□□□□□ -0.78
VAPB-202ENST00000395802 RAB5AP20339 215 aa10.19□□□□□ -0.78
VAPB-202ENST00000395802 HLA-DRB4X5D2U9 266 aa10.19□□□□□ -0.78
VAPB-202ENST00000395802 TRBV24-1A0A075B6N3 115 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 TGIF2-C20orf24A0A0A6YYL0 155 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 F6UB75 175 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 IGLL1P15814 213 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 LEPP41159 167 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 ODF3L2Q3SX64 289 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 ACTL10Q5JWF8 245 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 IBA57Q5T440 356 aaKnown RBP10.18□□□□□ -0.78
VAPB-202ENST00000395802 FAM231DQ6ZW35 169 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 OR4B1Q8NGF8 309 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 Q8TAT8 98 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 CLUHP3Q96NS8 147 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 ASCL2Q99929 193 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 OSTCQ9NRP0 149 aa10.18□□□□□ -0.78
VAPB-202ENST00000395802 V9GYV3 84 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms