RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 BCL2L10Q9HD36 194 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 OSTCQ9NRP0 149 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 SMCO4Q9NRQ5 59 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 SLC39A9Q9NUM3 307 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 TMEM106BQ9NUM4 274 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 EPDR1Q9UM22 224 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 NOP16Q9Y3C1 178 aaKnown RBP1.11□□□□□ -2.23
TRAV40-201ENST00000390467 BAZ1AQ9NRL2 1556 aaPredicted RBP1.11□□□□□ -2.23
TRAV40-201ENST00000390467 CCDC88CQ9P219 2028 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 POLA1P09884 1462 aaPredicted RBP1.11□□□□□ -2.23
TRAV40-201ENST00000390467 GAPVD1Q14C86 1478 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 CEP164Q9UPV0 1460 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 SMARCA4P51532 1647 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 MAST2Q6P0Q8 1798 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 MYLKQ15746 1914 aa1.11□□□□□ -2.23
TRAV40-201ENST00000390467 ABCA10Q8WWZ4 1543 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 ADGRB1O14514 1584 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 GLI3P10071 1580 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 CEP170Q5SW79 1584 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 NRKQ7Z2Y5 1582 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 EEA1Q15075 1411 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 UACAQ9BZF9 1416 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 IGHV3-49A0A0A0MS15 119 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 IGHV3-21A0A0B4J1V1 117 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 A8MWL6 223 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 K7EP34 96 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 CD3DP04234 171 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 GYPBP06028 91 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 IGHV3-30-3P0DP02 117 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 CCL4P13236 92 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 CCL5P13501 91 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 NPPCP23582 126 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 HIST1H4AP62805 103 aaKnown RBP1.1□□□□□ -2.23
TRAV40-201ENST00000390467 DEFA5Q01523 94 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 MRPL51Q4U2R6 128 aaKnown RBP1.1□□□□□ -2.23
TRAV40-201ENST00000390467 SPRNQ5BIV9 151 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 FP248Q71RG6 208 aaPredicted RBP1.1□□□□□ -2.23
TRAV40-201ENST00000390467 ADM2Q7Z4H4 148 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 SPANXA2-OT1Q8N9U9 137 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 ATP6V0E2Q8NHE4 81 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 S100ZQ8WXG8 99 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 FGF13Q92913 245 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 TSLPQ969D9 159 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 RAB37Q96AX2 223 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 HYLS1Q96M11 299 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 CHCHD7Q9BUK0 85 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 C11orf1Q9H5F2 150 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 XAGE1AQ9HD64 81 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 AP4S1Q9Y587 144 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 PHLDA3Q9Y5J5 127 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 RBBP6Q7Z6E9 1792 aaKnown RBP1.1□□□□□ -2.23
TRAV40-201ENST00000390467 N4BP2Q86UW6 1770 aaPredicted RBP1.1□□□□□ -2.23
TRAV40-201ENST00000390467 NUMA1Q14980 2115 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 CFTRP13569 1480 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 ERVK-7P63135 1459 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 PARP14Q460N5 1801 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 ATAD5Q96QE3 1844 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 MUC4Q99102 2169 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 MICAL3Q7RTP6 2002 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 SCN3AQ9NY46 2000 aa1.1□□□□□ -2.23
TRAV40-201ENST00000390467 NINQ8N4C6 2090 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 ADAMTS12P58397 1594 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 COL18A1P39060 1754 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 RTEL1-TNFRSF6BF6WH68 1400 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.09□□□□□ -2.23
TRAV40-201ENST00000390467 IGLC7A0M8Q6 106 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 GRIFINA4D1Z8 144 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 RBAKDNA6NC62 111 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 A6NN06 94 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 F8W1H4 67 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 C3orf84H3BNL1 204 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 ZNF737O75373 536 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 SFT2D2O95562 160 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 TCL1BO95988 128 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 IGHV3-7P01780 117 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 ZNF688P0C7X2 276 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 CD28P10747 220 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 SLC25A4P12235 298 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 SLC25A6P12236 298 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 TPT1P13693 172 aaKnown RBP1.09□□□□□ -2.23
TRAV40-201ENST00000390467 COX7CP15954 63 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 SNCAP37840 140 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 RPL27AP46776 148 aaKnown RBP1.09□□□□□ -2.23
TRAV40-201ENST00000390467 FXYD7P58549 80 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 BLCAPP62952 87 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 GNGT1P63211 74 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 MRPS36P82909 103 aaKnown RBP1.09□□□□□ -2.23
TRAV40-201ENST00000390467 SS18Q15532 418 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 LUZP6Q538Z0 58 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 MIC13Q5XKP0 118 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 ZNF660Q6AZW8 331 aaPredicted RBP1.09□□□□□ -2.23
TRAV40-201ENST00000390467 NOXRED1Q6NXP6 359 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 SOSTDC1Q6X4U4 206 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 C16orf47Q6ZP98 133 aaPredicted RBP1.09□□□□□ -2.23
TRAV40-201ENST00000390467 TMEM136Q6ZRR5 245 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 MIR17HGQ75NE6 70 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 AMN1Q8IY45 258 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 TMEM256Q8N2U0 113 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 FAM216BQ8N7L0 139 aa1.09□□□□□ -2.23
TRAV40-201ENST00000390467 PFN4Q8NHR9 129 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms