RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 RNF222A6NCQ9 220 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 EPM2AB3EWF7 344 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 GAGE7O76087 117 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 GAGE12FP0CL80 117 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 GAGE12GP0CL81 117 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 GAGE12IP0CL82 117 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 ATP6V1FQ16864 119 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 ESRGQ1W209 222 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 VWC2Q2TAL6 325 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 PXDC1Q5TGL8 231 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 TEPPQ6URK8 271 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 LINC00612Q8N6U2 182 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 MGST2Q99735 147 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 ATP5SQ99766 215 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 ARL6Q9H0F7 186 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 WFDC1Q9HC57 220 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 WDR83OSQ9Y284 106 aa11.08□□□□□ -0.64
VCX3A-201ENST00000381089 EREGO14944 169 aa11.07□□□□□ -0.64
VCX3A-201ENST00000381089 ARV1Q9H2C2 271 aa11.07□□□□□ -0.64
VCX3A-201ENST00000381089 ZNF586Q9NXT0 402 aa11.07□□□□□ -0.64
VCX3A-201ENST00000381089 AGPAT2O15120 278 aa11.06□□□□□ -0.64
VCX3A-201ENST00000381089 CAMLGP49069 296 aa11.06□□□□□ -0.64
VCX3A-201ENST00000381089 BPIFA4PQ86YQ2 179 aa11.06□□□□□ -0.64
VCX3A-201ENST00000381089 ZNF331Q9NQX6 463 aaPredicted RBP11.06□□□□□ -0.64
VCX3A-201ENST00000381089 HERC1Q15751 4861 aa11.05□□□□□ -0.64
VCX3A-201ENST00000381089 IFNA5P01569 189 aa11.05□□□□□ -0.64
VCX3A-201ENST00000381089 HOXA5P20719 270 aa11.05□□□□□ -0.64
VCX3A-201ENST00000381089 RAB31Q13636 194 aa11.05□□□□□ -0.64
VCX3A-201ENST00000381089 GFI1BQ5VTD9 330 aa11.05□□□□□ -0.64
VCX3A-201ENST00000381089 MIC13Q5XKP0 118 aa11.05□□□□□ -0.64
VCX3A-201ENST00000381089 WDR61Q9GZS3 305 aaKnown RBP11.05□□□□□ -0.64
VCX3A-201ENST00000381089 PRB4P10163 310 aaPredicted RBP11.04□□□□□ -0.64
VCX3A-201ENST00000381089 LEPP41159 167 aa11.04□□□□□ -0.64
VCX3A-201ENST00000381089 LINC00305Q7Z4B0 112 aa11.04□□□□□ -0.64
VCX3A-201ENST00000381089 SCGB1C1Q8TD33 95 aa11.04□□□□□ -0.64
VCX3A-201ENST00000381089 PYGO2Q9BRQ0 406 aa11.04□□□□□ -0.64
VCX3A-201ENST00000381089 NPCDR1Q9BY65 106 aa11.04□□□□□ -0.64
VCX3A-201ENST00000381089 PGPEP1Q9NXJ5 209 aa11.04□□□□□ -0.64
VCX3A-201ENST00000381089 PXMP4Q9Y6I8 212 aa11.04□□□□□ -0.64
VCX3A-201ENST00000381089 TRGV2A0A075B6R0 118 aa11.03□□□□□ -0.64
VCX3A-201ENST00000381089 HMSDA8MTL9 139 aa11.03□□□□□ -0.64
VCX3A-201ENST00000381089 MRPS12O15235 138 aaKnown RBP11.03□□□□□ -0.64
VCX3A-201ENST00000381089 C1QBP02746 253 aa11.03□□□□□ -0.64
VCX3A-201ENST00000381089 LINC00315P59091 139 aa11.03□□□□□ -0.64
VCX3A-201ENST00000381089 DAZ2Q13117 558 aaKnown RBP11.03□□□□□ -0.64
VCX3A-201ENST00000381089 OPCMLQ14982 345 aa11.03□□□□□ -0.64
VCX3A-201ENST00000381089 ZFP69Q49AA0 526 aa11.03□□□□□ -0.64
VCX3A-201ENST00000381089 PATE2Q6UY27 113 aa11.03□□□□□ -0.64
VCX3A-201ENST00000381089 ODF3Q96PU9 254 aa11.03□□□□□ -0.64
VCX3A-201ENST00000381089 TMPRSS5Q9H3S3 457 aa11.03□□□□□ -0.64
VCX3A-201ENST00000381089 J3KRW8 73 aa11.02□□□□□ -0.65
VCX3A-201ENST00000381089 SIVA1O15304 175 aa11.02□□□□□ -0.65
VCX3A-201ENST00000381089 COX7A2P2O60397 106 aa11.02□□□□□ -0.65
VCX3A-201ENST00000381089 ERVFC1-1P60608 527 aa11.02□□□□□ -0.65
VCX3A-201ENST00000381089 KIR3DS1Q14943 382 aa11.02□□□□□ -0.65
VCX3A-201ENST00000381089 RPL7L1Q6DKI1 246 aaKnown RBP11.02□□□□□ -0.65
VCX3A-201ENST00000381089 CDPF1Q6NVV7 123 aa11.02□□□□□ -0.65
VCX3A-201ENST00000381089 KCNRGQ8N5I3 272 aa11.02□□□□□ -0.65
VCX3A-201ENST00000381089 HSD17B11Q8NBQ5 300 aa11.02□□□□□ -0.65
VCX3A-201ENST00000381089 ZNF680Q8NEM1 530 aa11.02□□□□□ -0.65
VCX3A-201ENST00000381089 PARD6GQ9BYG4 376 aaPredicted RBP11.02□□□□□ -0.65
VCX3A-201ENST00000381089 A0A096LPF7 62 aa11.01□□□□□ -0.65
VCX3A-201ENST00000381089 TRAV12-3A0A0B4J271 114 aa11.01□□□□□ -0.65
VCX3A-201ENST00000381089 PFDN1O60925 122 aa11.01□□□□□ -0.65
VCX3A-201ENST00000381089 MPDU1O75352 247 aa11.01□□□□□ -0.65
VCX3A-201ENST00000381089 INAFM2P0DMQ5 153 aa11.01□□□□□ -0.65
VCX3A-201ENST00000381089 ZNF266Q14584 549 aa11.01□□□□□ -0.65
VCX3A-201ENST00000381089 SLC39A9Q9NUM3 307 aa11.01□□□□□ -0.65
VCX3A-201ENST00000381089 DMBT1Q9UGM3 2413 aaPredicted RBP11□□□□□ -0.65
VCX3A-201ENST00000381089 BORCS7-ASMTA0A0B4J1R7 106 aa11□□□□□ -0.65
VCX3A-201ENST00000381089 SNRPCP09234 159 aaKnown RBP11□□□□□ -0.65
VCX3A-201ENST00000381089 RPL29P47914 159 aaKnown RBP11□□□□□ -0.65
VCX3A-201ENST00000381089 ZNF345Q14585 488 aa11□□□□□ -0.65
VCX3A-201ENST00000381089 GUK1Q16774 197 aa11□□□□□ -0.65
VCX3A-201ENST00000381089 C10orf113Q5VZT2 155 aa11□□□□□ -0.65
VCX3A-201ENST00000381089 Q6ZTI0 123 aa11□□□□□ -0.65
VCX3A-201ENST00000381089 ARPC5LQ9BPX5 153 aa11□□□□□ -0.65
VCX3A-201ENST00000381089 A0A0D9SG52 128 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 KANTRA0A1W2PQU2 76 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 PRAC2D3DTV9 90 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 C17orf112F2Z3M2 114 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 BCL2L11O43521 198 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 NKX2-5P52952 324 aaPredicted RBP10.99□□□□□ -0.65
VCX3A-201ENST00000381089 GCSAMLQ5JQS6 135 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 TMUB2Q71RG4 321 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 NFE4Q86UQ8 179 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 FRZBQ92765 325 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 HYLS1Q96M11 299 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 C18orf15Q96N68 181 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 KCNIP2Q9NS61 270 aa10.99□□□□□ -0.65
VCX3A-201ENST00000381089 TRGV1A0A0A0MS02 117 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 NPIPB6E9PJ23 425 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 H3BTX0 84 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 SLC17A3O00476 420 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 TAAR5O14804 337 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 SLC25A5P05141 298 aaKnown RBP10.98□□□□□ -0.65
VCX3A-201ENST00000381089 CT45A10P0DMU9 189 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 FFAR4Q5NUL3 377 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 Q6ZRG5 221 aa10.98□□□□□ -0.65
VCX3A-201ENST00000381089 Q6ZRN7 208 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms