RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 PRAC2D3DTV9 90 aa15.55■□□□□ 0.08
VSX1-202ENST00000376709 ERCC8Q13216 396 aa15.55■□□□□ 0.08
VSX1-202ENST00000376709 LYZL1Q6UWQ5 148 aa15.55■□□□□ 0.08
VSX1-202ENST00000376709 ZANQ9Y493 2812 aa15.55■□□□□ 0.08
VSX1-202ENST00000376709 USP9YO00507 2555 aaPredicted RBP15.55■□□□□ 0.08
VSX1-202ENST00000376709 PPIFP30405 207 aaKnown RBP15.55■□□□□ 0.08
VSX1-202ENST00000376709 ZNF80P51504 273 aaPredicted RBP15.55■□□□□ 0.08
VSX1-202ENST00000376709 SSTP61278 116 aa15.55■□□□□ 0.08
VSX1-202ENST00000376709 PTPN13Q12923 2485 aa15.54■□□□□ 0.08
VSX1-202ENST00000376709 FAM181BA6NEQ2 426 aa15.54■□□□□ 0.08
VSX1-202ENST00000376709 C8orf86Q6ZUL3 223 aa15.54■□□□□ 0.08
VSX1-202ENST00000376709 C2orf88Q9BSF0 95 aa15.54■□□□□ 0.08
VSX1-202ENST00000376709 U3KQE9 123 aa15.54■□□□□ 0.08
VSX1-202ENST00000376709 ABCA12Q86UK0 2595 aa15.54■□□□□ 0.08
VSX1-202ENST00000376709 H3BUA1 57 aa15.53■□□□□ 0.08
VSX1-202ENST00000376709 TRBV12-3P01733 135 aa15.53■□□□□ 0.08
VSX1-202ENST00000376709 PF4V1P10720 104 aa15.53■□□□□ 0.08
VSX1-202ENST00000376709 MAPK1IP1LQ8NDC0 245 aa15.53■□□□□ 0.08
VSX1-202ENST00000376709 USMG5Q96IX5 58 aa15.53■□□□□ 0.08
VSX1-202ENST00000376709 A0A096LNT2 108 aa15.53■□□□□ 0.08
VSX1-202ENST00000376709 RBAKDNA6NC62 111 aa15.53■□□□□ 0.08
VSX1-202ENST00000376709 CHCHD1Q96BP2 118 aaKnown RBP15.53■□□□□ 0.08
VSX1-202ENST00000376709 IGHV3-11P01762 117 aa15.52■□□□□ 0.08
VSX1-202ENST00000376709 RPS20P60866 119 aaKnown RBP15.52■□□□□ 0.08
VSX1-202ENST00000376709 LBHQ53QV2 105 aaPredicted RBP15.52■□□□□ 0.08
VSX1-202ENST00000376709 ZNF705AQ6ZN79 300 aaPredicted RBP15.52■□□□□ 0.08
VSX1-202ENST00000376709 Q6ZS46 218 aa15.52■□□□□ 0.08
VSX1-202ENST00000376709 LINC01356Q8N9X3 169 aa15.52■□□□□ 0.08
VSX1-202ENST00000376709 GATD1Q8NB37 220 aa15.52■□□□□ 0.08
VSX1-202ENST00000376709 SNHG12Q9BXW3 62 aa15.52■□□□□ 0.08
VSX1-202ENST00000376709 ZMAT5Q9UDW3 170 aaKnown RBP15.52■□□□□ 0.08
VSX1-202ENST00000376709 CSPG4Q6UVK1 2322 aa15.52■□□□□ 0.07
VSX1-202ENST00000376709 PMCHL1Q16048 86 aa15.52■□□□□ 0.07
VSX1-202ENST00000376709 TENM4Q6N022 2769 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 TRAV8-2A0A0B4J237 113 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 ORM1P02763 201 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 LINC00614P0C842 121 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 UNQ9165/PRO28630Q6UXU0 137 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 LINC00469Q8N7U9 141 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 KLK15Q9H2R5 256 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 FABP5P3A8MUU1 101 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 NDUFA4O00483 81 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 BRI3O95415 125 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 EBLN2Q6P2I7 272 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 IL17RELQ6ZVW7 336 aa15.51■□□□□ 0.07
VSX1-202ENST00000376709 CHD6Q8TD26 2715 aa15.5■□□□□ 0.07
VSX1-202ENST00000376709 ZNF493Q6ZR52 646 aa15.5■□□□□ 0.07
VSX1-202ENST00000376709 FER1L6-AS1Q8NA97 138 aa15.5■□□□□ 0.07
VSX1-202ENST00000376709 MIEN1Q9BRT3 115 aa15.5■□□□□ 0.07
VSX1-202ENST00000376709 MUC21A0A0G2JKD1 596 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 MUC21A0A140T8X8 626 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 TMEM213A2RRL7 107 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 BTF3P20290 206 aaKnown RBP15.49■□□□□ 0.07
VSX1-202ENST00000376709 MUC21Q5SSG8 566 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 TMEM78Q5T7P6 136 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 GLMPQ8WWB7 406 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 MRPL53Q96EL3 112 aaKnown RBP15.49■□□□□ 0.07
VSX1-202ENST00000376709 C16orf92Q96LL3 132 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 CLEC5AQ9NY25 188 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 IGHV1-24A0A0C4DH33 117 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 CSN3P07498 182 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 CTRLP40313 264 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 SPATA45Q537H7 98 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 ATOH7Q8N100 152 aa15.49■□□□□ 0.07
VSX1-202ENST00000376709 ZNF138P52744 262 aa15.48■□□□□ 0.07
VSX1-202ENST00000376709 LCNL1Q6ZST4 164 aa15.48■□□□□ 0.07
VSX1-202ENST00000376709 OR4X2Q8NGF9 303 aa15.48■□□□□ 0.07
VSX1-202ENST00000376709 AGPAT4-IT1Q9H0P7 198 aa15.48■□□□□ 0.07
VSX1-202ENST00000376709 A0A0G2JLM5 398 aa15.48■□□□□ 0.07
VSX1-202ENST00000376709 TGFAP01135 160 aa15.48■□□□□ 0.07
VSX1-202ENST00000376709 SRSF2Q01130 221 aaKnown RBP15.48■□□□□ 0.07
VSX1-202ENST00000376709 NAV2Q8IVL1 2488 aa15.47■□□□□ 0.07
VSX1-202ENST00000376709 C2orf70A6NJV1 201 aa15.47■□□□□ 0.07
VSX1-202ENST00000376709 RNF223E7ERA6 249 aa15.47■□□□□ 0.07
VSX1-202ENST00000376709 RAB4AP20338 218 aa15.47■□□□□ 0.07
VSX1-202ENST00000376709 M0R143 59 aa15.46■□□□□ 0.07
VSX1-202ENST00000376709 SMAD7O15105 426 aaKnown RBP15.46■□□□□ 0.07
VSX1-202ENST00000376709 IGLV1-40P01703 118 aa15.46■□□□□ 0.07
VSX1-202ENST00000376709 IGHV4-59P01825 116 aa15.46■□□□□ 0.07
VSX1-202ENST00000376709 TWIST1Q15672 202 aa15.46■□□□□ 0.07
VSX1-202ENST00000376709 DEFB112Q30KQ8 113 aa15.46■□□□□ 0.07
VSX1-202ENST00000376709 IGLC6P0CF74 106 aa15.46■□□□□ 0.07
VSX1-202ENST00000376709 C9orf139Q6ZV77 190 aa15.46■□□□□ 0.07
VSX1-202ENST00000376709 NPFFR1Q9GZQ6 430 aa15.46■□□□□ 0.07
VSX1-202ENST00000376709 APCP25054 2843 aa15.46■□□□□ 0.06
VSX1-202ENST00000376709 LEPROTL1O95214 131 aa15.45■□□□□ 0.06
VSX1-202ENST00000376709 AMN1Q8IY45 258 aa15.45■□□□□ 0.06
VSX1-202ENST00000376709 D6R8Y8 96 aa15.45■□□□□ 0.06
VSX1-202ENST00000376709 J3QLI3 93 aa15.45■□□□□ 0.06
VSX1-202ENST00000376709 MAJINQ3KP22 176 aa15.45■□□□□ 0.06
VSX1-202ENST00000376709 DMRTA1Q5VZB9 504 aa15.45■□□□□ 0.06
VSX1-202ENST00000376709 FAM104BQ5XKR9 115 aa15.45■□□□□ 0.06
VSX1-202ENST00000376709 SPATA12Q7Z6I5 190 aa15.45■□□□□ 0.06
VSX1-202ENST00000376709 TMEM70Q9BUB7 260 aa15.45■□□□□ 0.06
VSX1-202ENST00000376709 TMEM95Q3KNT9 176 aa15.44■□□□□ 0.06
VSX1-202ENST00000376709 LINC01559Q495D7 138 aa15.44■□□□□ 0.06
VSX1-202ENST00000376709 C9orf47Q6ZRZ4 202 aa15.44■□□□□ 0.06
VSX1-202ENST00000376709 ZNF738Q8NE65 137 aa15.44■□□□□ 0.06
VSX1-202ENST00000376709 DEFB113Q30KQ7 82 aa15.43■□□□□ 0.06
VSX1-202ENST00000376709 LINC00173Q6ZV60 143 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms