RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 U3KQK5 164 aa10.84□□□□□ -0.67
HMGCL-203ENST00000374490 MTORP42345 2549 aa10.83□□□□□ -0.68
HMGCL-203ENST00000374490 RBAKDNA6NC62 111 aa10.83□□□□□ -0.68
HMGCL-203ENST00000374490 IGHV3-23P01764 117 aa10.83□□□□□ -0.68
HMGCL-203ENST00000374490 IGHV4-39P01824 125 aa10.83□□□□□ -0.68
HMGCL-203ENST00000374490 LYZL1Q6UWQ5 148 aa10.83□□□□□ -0.68
HMGCL-203ENST00000374490 Q71RC1 249 aaPredicted RBP10.83□□□□□ -0.68
HMGCL-203ENST00000374490 OR10AG1Q8NH19 301 aa10.83□□□□□ -0.68
HMGCL-203ENST00000374490 PRSS3P2Q8NHM4 247 aa10.83□□□□□ -0.68
HMGCL-203ENST00000374490 TMEM208Q9BTX3 173 aa10.83□□□□□ -0.68
HMGCL-203ENST00000374490 MS4A6AQ9H2W1 248 aa10.83□□□□□ -0.68
HMGCL-203ENST00000374490 IGKV2-40A0A087WW87 121 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-203ENST00000374490 IGKV2D-40P01614 121 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-203ENST00000374490 G0S2P27469 103 aa10.82□□□□□ -0.68
HMGCL-203ENST00000374490 C15orf32Q32M92 178 aa10.82□□□□□ -0.68
HMGCL-203ENST00000374490 FAM104BQ5XKR9 115 aa10.82□□□□□ -0.68
HMGCL-203ENST00000374490 SPATA12Q7Z6I5 190 aa10.82□□□□□ -0.68
HMGCL-203ENST00000374490 EEF1AKMT3Q96AZ1 226 aa10.82□□□□□ -0.68
HMGCL-203ENST00000374490 SMAD5-AS1Q9Y6J3 95 aa10.82□□□□□ -0.68
HMGCL-203ENST00000374490 HRNRQ86YZ3 2850 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-203ENST00000374490 TACC2O95359 2948 aa10.82□□□□□ -0.68
HMGCL-203ENST00000374490 SETD2Q9BYW2 2564 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-203ENST00000374490 MED13LQ71F56 2210 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 TRBV7-1A0A0A6YYK4 115 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 NPFFO15130 113 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 ATP6V0E1O15342 81 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 RHOGP84095 191 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 ECSCRQ19T08 205 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 ORMDL3Q8N138 153 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 FER1L6-AS1Q8NA97 138 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 MRPL53Q96EL3 112 aaKnown RBP10.81□□□□□ -0.68
HMGCL-203ENST00000374490 AJUBAQ96IF1 538 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 TPPP3Q9BW30 176 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 BPESC1Q9GZL8 116 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 ZFAND3Q9H8U3 227 aa10.81□□□□□ -0.68
HMGCL-203ENST00000374490 GPR183P32249 361 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 SAA4P35542 130 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 LMO4P61968 165 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 ZNF124Q15973 351 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 MAJINQ3KP22 176 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 PRR31Q5SQ13 230 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 LINC01545Q5VT33 79 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 PIMREGQ9BSJ6 248 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 GOLT1BQ9Y3E0 138 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 CSN3P07498 182 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 IGLC6P0CF74 106 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 ATP5J2P56134 94 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 PRELID3AQ96N28 172 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 ASCL2Q99929 193 aa10.8□□□□□ -0.68
HMGCL-203ENST00000374490 SPG11Q96JI7 2443 aa10.79□□□□□ -0.68
HMGCL-203ENST00000374490 FABP5P3A8MUU1 101 aa10.79□□□□□ -0.68
HMGCL-203ENST00000374490 BUB3O43684 328 aa10.79□□□□□ -0.68
HMGCL-203ENST00000374490 FOSL1P15407 271 aa10.79□□□□□ -0.68
HMGCL-203ENST00000374490 CLEC2AQ6UVW9 174 aa10.79□□□□□ -0.68
HMGCL-203ENST00000374490 LINC00173Q6ZV60 143 aa10.79□□□□□ -0.68
HMGCL-203ENST00000374490 PMCHL2Q9BQD1 86 aa10.79□□□□□ -0.68
HMGCL-203ENST00000374490 HIF1ANQ9NWT6 349 aa10.79□□□□□ -0.68
HMGCL-203ENST00000374490 TMSB15BA0A087X1C1 80 aa10.78□□□□□ -0.68
HMGCL-203ENST00000374490 D6R8Y8 96 aa10.78□□□□□ -0.68
HMGCL-203ENST00000374490 CLEC3BP05452 202 aa10.78□□□□□ -0.68
HMGCL-203ENST00000374490 ZNF138P52744 262 aa10.78□□□□□ -0.68
HMGCL-203ENST00000374490 CRIP2P52943 208 aaPredicted RBP10.78□□□□□ -0.68
HMGCL-203ENST00000374490 SLC25A34Q6PIV7 304 aa10.78□□□□□ -0.68
HMGCL-203ENST00000374490 METTL26Q96S19 204 aa10.78□□□□□ -0.68
HMGCL-203ENST00000374490 VGLL1Q99990 258 aa10.78□□□□□ -0.68
HMGCL-203ENST00000374490 ZNF747Q9BV97 191 aa10.78□□□□□ -0.68
HMGCL-203ENST00000374490 MOB4Q9Y3A3 225 aa10.78□□□□□ -0.68
HMGCL-203ENST00000374490 NF1P21359 2839 aa10.78□□□□□ -0.68
HMGCL-203ENST00000374490 NDUFS8O00217 210 aa10.77□□□□□ -0.68
HMGCL-203ENST00000374490 IGHG4P01861 327 aa10.77□□□□□ -0.68
HMGCL-203ENST00000374490 PPBPP02775 128 aa10.77□□□□□ -0.68
HMGCL-203ENST00000374490 LINC01559Q495D7 138 aa10.77□□□□□ -0.68
HMGCL-203ENST00000374490 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.77□□□□□ -0.68
HMGCL-203ENST00000374490 STPG4Q8N801 248 aa10.77□□□□□ -0.68
HMGCL-203ENST00000374490 C5orf56Q8N8D9 126 aa10.77□□□□□ -0.68
HMGCL-203ENST00000374490 ORAOV1Q8WV07 137 aa10.77□□□□□ -0.68
HMGCL-203ENST00000374490 CNFNQ9BYD5 112 aa10.77□□□□□ -0.68
HMGCL-203ENST00000374490 AKAP6Q13023 2319 aa10.77□□□□□ -0.69
HMGCL-203ENST00000374490 TMEM213A2RRL7 107 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 FAM223BA6NKX1 122 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 HIST1H1AQ02539 215 aaPredicted RBP10.76□□□□□ -0.69
HMGCL-203ENST00000374490 ATP5G2Q06055 141 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 MRPL51Q4U2R6 128 aaKnown RBP10.76□□□□□ -0.69
HMGCL-203ENST00000374490 FAM223AQ8IWN6 122 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 AMN1Q8IY45 258 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 Q8TAT8 98 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 DPF1Q92782 380 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 CCDC140Q96MF4 163 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 NPFFR1Q9GZQ6 430 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 SIGLEC8Q9NYZ4 499 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 HINT1P49773 126 aaPredicted RBP10.76□□□□□ -0.69
HMGCL-203ENST00000374490 DEFB113Q30KQ7 82 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 CLEC19AQ6UXS0 136 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 SCRT2Q9NQ03 307 aa10.76□□□□□ -0.69
HMGCL-203ENST00000374490 hDV102S1A0JD36 115 aa10.75□□□□□ -0.69
HMGCL-203ENST00000374490 HBDP02042 147 aa10.75□□□□□ -0.69
HMGCL-203ENST00000374490 CKS2P33552 79 aa10.75□□□□□ -0.69
HMGCL-203ENST00000374490 IFI27P40305 119 aaPredicted RBP10.75□□□□□ -0.69
HMGCL-203ENST00000374490 TFPI2P48307 235 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms