RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 TRGV9Q99603 122 aa12.32□□□□□ -0.44
SRPK1-204ENST00000373825 TMEM126AQ9H061 195 aa12.32□□□□□ -0.44
SRPK1-204ENST00000373825 HIGD1BQ9P298 99 aa12.31□□□□□ -0.44
SRPK1-204ENST00000373825 C17orf77Q96MU5 243 aa12.31□□□□□ -0.44
SRPK1-204ENST00000373825 DUX3Q96PT4 197 aa12.31□□□□□ -0.44
SRPK1-204ENST00000373825 SPXQ9BT56 116 aa12.31□□□□□ -0.44
SRPK1-204ENST00000373825 TRAV13-1A0A0B4J241 112 aa12.31□□□□□ -0.44
SRPK1-204ENST00000373825 ERCC8Q13216 396 aa12.31□□□□□ -0.44
SRPK1-204ENST00000373825 Q8N8P6 123 aa12.31□□□□□ -0.44
SRPK1-204ENST00000373825 SLC25A15Q9Y619 301 aa12.31□□□□□ -0.44
SRPK1-204ENST00000373825 IGKV1OR2-108A0A075B7D4 117 aa12.3□□□□□ -0.44
SRPK1-204ENST00000373825 LINC00322Q6ZN03 302 aaPredicted RBP12.3□□□□□ -0.44
SRPK1-204ENST00000373825 COLCA1Q6ZS62 124 aa12.3□□□□□ -0.44
SRPK1-204ENST00000373825 WDR86Q86TI4 376 aa12.3□□□□□ -0.44
SRPK1-204ENST00000373825 CITED2Q99967 270 aaPredicted RBP12.3□□□□□ -0.44
SRPK1-204ENST00000373825 HLA-DMBP28068 263 aa12.3□□□□□ -0.44
SRPK1-204ENST00000373825 TRPT1Q86TN4 253 aaKnown RBP12.3□□□□□ -0.44
SRPK1-204ENST00000373825 ACACAQ13085 2346 aa12.3□□□□□ -0.44
SRPK1-204ENST00000373825 PINLYPA6NC86 204 aa12.3□□□□□ -0.44
SRPK1-204ENST00000373825 IGLV2-14P01704 120 aa12.3□□□□□ -0.44
SRPK1-204ENST00000373825 IGHV1-2P23083 117 aa12.3□□□□□ -0.44
SRPK1-204ENST00000373825 RNASE4P34096 147 aaKnown RBP12.3□□□□□ -0.44
SRPK1-204ENST00000373825 DUX4L9Q6RFH8 374 aaPredicted RBP12.3□□□□□ -0.44
SRPK1-204ENST00000373825 C5orf47Q569G3 176 aa12.29□□□□□ -0.44
SRPK1-204ENST00000373825 CRIP3Q6Q6R5 217 aa12.29□□□□□ -0.44
SRPK1-204ENST00000373825 DTX2Q86UW9 622 aa12.29□□□□□ -0.44
SRPK1-204ENST00000373825 A0A087WX48 190 aa12.29□□□□□ -0.44
SRPK1-204ENST00000373825 ADARB2-AS1A8MUL3 147 aa12.29□□□□□ -0.44
SRPK1-204ENST00000373825 ATP5J2P56134 94 aa12.29□□□□□ -0.44
SRPK1-204ENST00000373825 C1orf210Q8IVY1 113 aa12.29□□□□□ -0.44
SRPK1-204ENST00000373825 TRAV21A0A0B4J279 112 aa12.29□□□□□ -0.44
SRPK1-204ENST00000373825 A0A1W2PPI3 338 aa12.29□□□□□ -0.44
SRPK1-204ENST00000373825 CFC1BP0CG36 223 aa12.29□□□□□ -0.44
SRPK1-204ENST00000373825 CFC1P0CG37 223 aa12.29□□□□□ -0.44
SRPK1-204ENST00000373825 WT1-ASQ06250 92 aa12.28□□□□□ -0.44
SRPK1-204ENST00000373825 RIF1Q5UIP0 2472 aaKnown RBP12.28□□□□□ -0.44
SRPK1-204ENST00000373825 IGLV3-12A0A075B6K2 115 aa12.28□□□□□ -0.44
SRPK1-204ENST00000373825 IGKV1D-17A0A075B6S4 117 aa12.28□□□□□ -0.44
SRPK1-204ENST00000373825 ZNF503-AS2A6NEH8 195 aa12.28□□□□□ -0.44
SRPK1-204ENST00000373825 SRRM4A7MD48 611 aaKnown RBP12.28□□□□□ -0.44
SRPK1-204ENST00000373825 CR1LQ2VPA4 569 aa12.28□□□□□ -0.44
SRPK1-204ENST00000373825 C19orf54Q5BKX5 351 aa12.28□□□□□ -0.44
SRPK1-204ENST00000373825 PRRG2O14669 202 aa12.27□□□□□ -0.44
SRPK1-204ENST00000373825 ODF1Q14990 250 aa12.27□□□□□ -0.44
SRPK1-204ENST00000373825 ZNF503Q96F45 646 aa12.27□□□□□ -0.44
SRPK1-204ENST00000373825 TOMM7Q9P0U1 55 aa12.27□□□□□ -0.44
SRPK1-204ENST00000373825 DUX5Q96PT3 197 aa12.27□□□□□ -0.45
SRPK1-204ENST00000373825 ZNF106Q9H2Y7 1883 aaKnown RBP12.27□□□□□ -0.45
SRPK1-204ENST00000373825 A0A1B0GXF2 115 aa12.27□□□□□ -0.45
SRPK1-204ENST00000373825 SRRM5B3KS81 715 aa12.27□□□□□ -0.45
SRPK1-204ENST00000373825 PVRIGQ6DKI7 326 aa12.27□□□□□ -0.45
SRPK1-204ENST00000373825 FAM167A-AS1Q96KT0 104 aa12.27□□□□□ -0.45
SRPK1-204ENST00000373825 TRAV4A0A0B4J268 109 aa12.27□□□□□ -0.45
SRPK1-204ENST00000373825 TCL1BO95988 128 aa12.27□□□□□ -0.45
SRPK1-204ENST00000373825 DEFB109BQ30KR1 87 aa12.27□□□□□ -0.45
SRPK1-204ENST00000373825 TDHQ8IZJ6 230 aa12.27□□□□□ -0.45
SRPK1-204ENST00000373825 SMRP1Q8NCR6 262 aa12.27□□□□□ -0.45
SRPK1-204ENST00000373825 SPRY2O43597 315 aa12.26□□□□□ -0.45
SRPK1-204ENST00000373825 PATE3B3GLJ2 98 aa12.26□□□□□ -0.45
SRPK1-204ENST00000373825 CD7P09564 240 aa12.26□□□□□ -0.45
SRPK1-204ENST00000373825 TMEM167AQ8TBQ9 72 aa12.26□□□□□ -0.45
SRPK1-204ENST00000373825 MBD6Q96DN6 1003 aa12.26□□□□□ -0.45
SRPK1-204ENST00000373825 TP53TG1Q9Y2A0 90 aa12.26□□□□□ -0.45
SRPK1-204ENST00000373825 PATE2Q6UY27 113 aa12.26□□□□□ -0.45
SRPK1-204ENST00000373825 Q6ZT83 130 aa12.26□□□□□ -0.45
SRPK1-204ENST00000373825 UTRNP46939 3433 aa12.26□□□□□ -0.45
SRPK1-204ENST00000373825 TRBV19A0A075B6N1 114 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 CEACAM4O75871 244 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 HCFC1P51610 2035 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 CDX4O14627 284 aaPredicted RBP12.25□□□□□ -0.45
SRPK1-204ENST00000373825 FAM90A1Q86YD7 464 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 ATP6V0E2Q8NHE4 81 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 LINC00312Q9Y6C7 94 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 CEP350Q5VT06 3117 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 TRAV17A0A0B4J275 112 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 CD3EP07766 207 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 CD28P10747 220 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 DNAH12Q6ZR08 3092 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 TRAV41A0A0B4J266 112 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 PRR7Q8TB68 274 aa12.25□□□□□ -0.45
SRPK1-204ENST00000373825 A4D1N5 150 aa12.24□□□□□ -0.45
SRPK1-204ENST00000373825 TM4SF5O14894 197 aa12.24□□□□□ -0.45
SRPK1-204ENST00000373825 SRD5A1P18405 259 aa12.24□□□□□ -0.45
SRPK1-204ENST00000373825 LINC01620Q4KN68 170 aa12.24□□□□□ -0.45
SRPK1-204ENST00000373825 MRAPQ8TCY5 172 aa12.24□□□□□ -0.45
SRPK1-204ENST00000373825 NDUFA4L2Q9NRX3 87 aa12.24□□□□□ -0.45
SRPK1-204ENST00000373825 AGRNO00468 2067 aa12.24□□□□□ -0.45
SRPK1-204ENST00000373825 NPFFO15130 113 aa12.23□□□□□ -0.45
SRPK1-204ENST00000373825 TRGV11A0A075B6L2 103 aa12.23□□□□□ -0.45
SRPK1-204ENST00000373825 MRPL14Q6P1L8 145 aaKnown RBP12.23□□□□□ -0.45
SRPK1-204ENST00000373825 PRR25Q96S07 402 aa12.23□□□□□ -0.45
SRPK1-204ENST00000373825 EGR2P11161 476 aaPredicted RBP12.23□□□□□ -0.45
SRPK1-204ENST00000373825 ASCL5Q7RTU5 278 aa12.23□□□□□ -0.45
SRPK1-204ENST00000373825 PLXNA2O75051 1894 aa12.23□□□□□ -0.45
SRPK1-204ENST00000373825 TEX49A0A1B0GTD5 131 aa12.23□□□□□ -0.45
SRPK1-204ENST00000373825 SS18L1O75177 396 aaPredicted RBP12.23□□□□□ -0.45
SRPK1-204ENST00000373825 CLEC19AQ6UXS0 136 aa12.23□□□□□ -0.45
SRPK1-204ENST00000373825 J3QQQ9 107 aa12.22□□□□□ -0.45
SRPK1-204ENST00000373825 ZNF493Q6ZR52 646 aa12.22□□□□□ -0.45
SRPK1-204ENST00000373825 MAPKAPK5-AS1Q8N8E1 139 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms