RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 PRR30Q53SZ7 412 aaPredicted RBP9.2□□□□□ -0.94
VCL-202ENST00000372755 PRSS57Q6UWY2 283 aa9.2□□□□□ -0.94
VCL-202ENST00000372755 SMIM2Q9BVW6 85 aa9.2□□□□□ -0.94
VCL-202ENST00000372755 PRO1854Q9UHT4 67 aa9.2□□□□□ -0.94
VCL-202ENST00000372755 MAPK1IP1LQ8NDC0 245 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 ZMAT4Q9H898 229 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 TAF1LQ8IZX4 1826 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 ANGP03950 147 aaKnown RBP9.19□□□□□ -0.94
VCL-202ENST00000372755 RSPO3Q9BXY4 272 aaPredicted RBP9.19□□□□□ -0.94
VCL-202ENST00000372755 IGHG4P01861 327 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 CYYR1Q96J86 154 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 ATP6V0BQ99437 205 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 V9GYV3 84 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 A0A0G2JMZ2 1700 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 LRRC37A2A6NM11 1700 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 COX8AP10176 69 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 RHOHQ15669 191 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 IGF2BP2-AS1Q96M15 143 aa9.19□□□□□ -0.94
VCL-202ENST00000372755 BOD1L2Q8IYS8 172 aa9.18□□□□□ -0.94
VCL-202ENST00000372755 AHCTF1Q8WYP5 2266 aa9.18□□□□□ -0.94
VCL-202ENST00000372755 K7EM74 188 aa9.18□□□□□ -0.94
VCL-202ENST00000372755 SBF2Q86WG5 1849 aa9.18□□□□□ -0.94
VCL-202ENST00000372755 CHD5Q8TDI0 1954 aa9.18□□□□□ -0.94
VCL-202ENST00000372755 ETV2O00321 342 aaPredicted RBP9.18□□□□□ -0.94
VCL-202ENST00000372755 Q6ZR03 302 aa9.18□□□□□ -0.94
VCL-202ENST00000372755 ZNF318Q5VUA4 2279 aa9.18□□□□□ -0.94
VCL-202ENST00000372755 F8VRH5 84 aa9.18□□□□□ -0.94
VCL-202ENST00000372755 CARD19Q96LW7 228 aa9.18□□□□□ -0.94
VCL-202ENST00000372755 SIGLEC8Q9NYZ4 499 aa9.18□□□□□ -0.94
VCL-202ENST00000372755 NYNRINQ9P2P1 1898 aaKnown RBP9.18□□□□□ -0.94
VCL-202ENST00000372755 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.18□□□□□ -0.94
VCL-202ENST00000372755 CEND1Q8N111 149 aa9.18□□□□□ -0.94
VCL-202ENST00000372755 K7EP34 96 aa9.17□□□□□ -0.94
VCL-202ENST00000372755 TRACP01848 142 aa9.17□□□□□ -0.94
VCL-202ENST00000372755 FOXI2Q6ZQN5 318 aa9.17□□□□□ -0.94
VCL-202ENST00000372755 VOPP1Q96AW1 172 aa9.17□□□□□ -0.94
VCL-202ENST00000372755 MRPL53Q96EL3 112 aaKnown RBP9.17□□□□□ -0.94
VCL-202ENST00000372755 GREB1LQ9C091 1923 aaPredicted RBP9.17□□□□□ -0.94
VCL-202ENST00000372755 J3QQQ9 107 aa9.17□□□□□ -0.94
VCL-202ENST00000372755 UBE2BP63146 152 aa9.17□□□□□ -0.94
VCL-202ENST00000372755 MRPL35Q9NZE8 188 aaKnown RBP9.17□□□□□ -0.94
VCL-202ENST00000372755 J3QKU1 62 aa9.17□□□□□ -0.94
VCL-202ENST00000372755 FHL1Q13642 323 aa9.17□□□□□ -0.94
VCL-202ENST00000372755 IFITM1P13164 125 aa9.16□□□□□ -0.94
VCL-202ENST00000372755 HLA-DMBP28068 263 aa9.16□□□□□ -0.94
VCL-202ENST00000372755 hADV29S1A0JD25 119 aa9.16□□□□□ -0.94
VCL-202ENST00000372755 NPYP01303 97 aa9.16□□□□□ -0.94
VCL-202ENST00000372755 WT1-ASQ06250 92 aa9.16□□□□□ -0.94
VCL-202ENST00000372755 ZC2HC1AQ96GY0 325 aa9.16□□□□□ -0.94
VCL-202ENST00000372755 IGKV1-39P01597 117 aa9.16□□□□□ -0.94
VCL-202ENST00000372755 IGKV1D-39P04432 117 aa9.16□□□□□ -0.94
VCL-202ENST00000372755 IGLC2P0DOY2 106 aa9.16□□□□□ -0.94
VCL-202ENST00000372755 IGLC3P0DOY3 106 aa9.16□□□□□ -0.94
VCL-202ENST00000372755 TSSC4Q9Y5U2 329 aaPredicted RBP9.15□□□□□ -0.94
VCL-202ENST00000372755 PDCD11Q14690 1871 aaKnown RBP9.15□□□□□ -0.94
VCL-202ENST00000372755 GBF1Q92538 1859 aa9.15□□□□□ -0.94
VCL-202ENST00000372755 IGLV3-9A0A075B6K5 115 aa9.15□□□□□ -0.94
VCL-202ENST00000372755 CACNA1IQ9P0X4 2223 aa9.15□□□□□ -0.94
VCL-202ENST00000372755 SIVA1O15304 175 aa9.15□□□□□ -0.94
VCL-202ENST00000372755 CFHR4Q92496 578 aa9.15□□□□□ -0.94
VCL-202ENST00000372755 A0A096LPF7 62 aa9.15□□□□□ -0.94
VCL-202ENST00000372755 ZNF726P1Q15940 193 aa9.15□□□□□ -0.94
VCL-202ENST00000372755 ESPL1Q14674 2120 aa9.15□□□□□ -0.94
VCL-202ENST00000372755 A0A1B0GUS0 222 aa9.15□□□□□ -0.95
VCL-202ENST00000372755 C15orf65H3BRN8 121 aa9.15□□□□□ -0.95
VCL-202ENST00000372755 NDUFS5O43920 106 aa9.15□□□□□ -0.95
VCL-202ENST00000372755 IGLC1P0CG04 106 aa9.15□□□□□ -0.95
VCL-202ENST00000372755 IGKV2D-24A0A075B6R9 120 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 WDR86Q86TI4 376 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 K7EMI3 77 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 DUX4L9Q6RFH8 374 aaPredicted RBP9.14□□□□□ -0.95
VCL-202ENST00000372755 FXYD5Q96DB9 178 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 C9JQL5 133 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 IGLV1-44P01699 117 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 CRYGCP07315 174 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 ZNF493Q6ZR52 646 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 MRAPQ8TCY5 172 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 TPSG1Q9NRR2 321 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 ABCA7Q8IZY2 2146 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 TRAV12-1A0A0B4J245 112 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 A0A1W2PPM0 123 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 BVES-AS1Q5T3Y7 98 aa9.14□□□□□ -0.95
VCL-202ENST00000372755 IGKV1OR2-108A0A075B7D4 117 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 Q6ZWC4 215 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 C11orf52Q96A22 123 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 FAM120AOSQ5T036 256 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 SPANXCQ9NY87 97 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 FAM186AA6NE01 2351 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 NDUFS6O75380 124 aaKnown RBP9.13□□□□□ -0.95
VCL-202ENST00000372755 TINCRA0A1B0GVN0 87 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 RBAKDNA6NC62 111 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 LTAP01374 205 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 ETDBQ3ZM63 59 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 ANKRD29Q8N6D5 301 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 C8orf31Q8N9H6 132 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 KAAG1Q9UBP8 84 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 TEX48A0A1B0GUV7 120 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 HERV-K104P63124 156 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 CLPSL2Q6UWE3 100 aa9.13□□□□□ -0.95
VCL-202ENST00000372755 ORMDL1Q9P0S3 153 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms