RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 DIAPH2-AS1Q14236 149 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 CABIN1Q9Y6J0 2220 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 ATP5J2P56134 94 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 C9orf153Q5TBE3 101 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 PRO1854Q9UHT4 67 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 FAM223BA6NKX1 122 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 SLC25A20O43772 301 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 FAM223AQ8IWN6 122 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 GTSF1Q8WW33 167 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 IGLV1-44P01699 117 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 FGF6P10767 208 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 FOXI2Q6ZQN5 318 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 SH2D6Q7Z4S9 175 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 MED12Q93074 2177 aa11.09□□□□□ -0.63
SMC5-201ENST00000361138 DTX1Q86Y01 620 aa11.08□□□□□ -0.64
SMC5-201ENST00000361138 OBSL1O75147 1896 aa11.08□□□□□ -0.64
SMC5-201ENST00000361138 SNRNP200O75643 2136 aaKnown RBP11.08□□□□□ -0.64
SMC5-201ENST00000361138 A0A0G2JNJ9 132 aa11.08□□□□□ -0.64
SMC5-201ENST00000361138 SMIM2Q9BVW6 85 aa11.08□□□□□ -0.64
SMC5-201ENST00000361138 Q9UFV3 132 aa11.08□□□□□ -0.64
SMC5-201ENST00000361138 CRPP02741 224 aa11.08□□□□□ -0.64
SMC5-201ENST00000361138 RASL10AQ92737 203 aa11.08□□□□□ -0.64
SMC5-201ENST00000361138 TRBV25-1A0A075B6N4 114 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 GP9P14770 177 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 OVOL2Q9BRP0 275 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 GAGE2AQ6NT46 116 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 TRPT1Q86TN4 253 aaKnown RBP11.07□□□□□ -0.64
SMC5-201ENST00000361138 ADARB2-AS1A8MUL3 147 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 COL8A2P25067 703 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 LY6G5BQ8NDX9 201 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 CRIP3Q6Q6R5 217 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 PEMTQ9UBM1 199 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 SS18L2Q9UHA2 77 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 FCN3O75636 299 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 HLA-DMBP28068 263 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 HIST1H4AP62805 103 aaKnown RBP11.07□□□□□ -0.64
SMC5-201ENST00000361138 ZNF295-AS1Q8N0V1 137 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 FAM167A-AS1Q96KT0 104 aa11.07□□□□□ -0.64
SMC5-201ENST00000361138 EGR2P11161 476 aaPredicted RBP11.06□□□□□ -0.64
SMC5-201ENST00000361138 LINC00158P58513 81 aa11.06□□□□□ -0.64
SMC5-201ENST00000361138 TMEM219Q86XT9 240 aa11.06□□□□□ -0.64
SMC5-201ENST00000361138 PLA2G5P39877 138 aa11.06□□□□□ -0.64
SMC5-201ENST00000361138 THADAQ6YHU6 1953 aa11.06□□□□□ -0.64
SMC5-201ENST00000361138 KNTC1P50748 2209 aa11.06□□□□□ -0.64
SMC5-201ENST00000361138 PATE2Q6UY27 113 aa11.06□□□□□ -0.64
SMC5-201ENST00000361138 CFAP161Q6P656 301 aa11.06□□□□□ -0.64
SMC5-201ENST00000361138 C7orf69Q9H7B7 122 aa11.06□□□□□ -0.64
SMC5-201ENST00000361138 LEPROTO15243 131 aa11.06□□□□□ -0.64
SMC5-201ENST00000361138 FAM110DQ8TAY7 271 aaPredicted RBP11.06□□□□□ -0.64
SMC5-201ENST00000361138 SHISA9B4DS77 424 aa11.05□□□□□ -0.64
SMC5-201ENST00000361138 C2orf70A6NJV1 201 aa11.05□□□□□ -0.64
SMC5-201ENST00000361138 Q6ZPA2 131 aa11.05□□□□□ -0.64
SMC5-201ENST00000361138 BRWD1Q9NSI6 2320 aa11.05□□□□□ -0.64
SMC5-201ENST00000361138 EP400Q96L91 3159 aa11.05□□□□□ -0.64
SMC5-201ENST00000361138 RP1P56715 2156 aa11.05□□□□□ -0.64
SMC5-201ENST00000361138 LOXP28300 417 aaPredicted RBP11.05□□□□□ -0.64
SMC5-201ENST00000361138 GATD1Q8NB37 220 aa11.05□□□□□ -0.64
SMC5-201ENST00000361138 C8orf86Q6ZUL3 223 aa11.05□□□□□ -0.64
SMC5-201ENST00000361138 ZNF491Q8N8L2 437 aa11.05□□□□□ -0.64
SMC5-201ENST00000361138 C20orf78Q9BR46 151 aa11.05□□□□□ -0.64
SMC5-201ENST00000361138 HIGD1BQ9P298 99 aa11.05□□□□□ -0.64
SMC5-201ENST00000361138 TRGV2A0A075B6R0 118 aa11.04□□□□□ -0.64
SMC5-201ENST00000361138 FXYD2P54710 66 aa11.04□□□□□ -0.64
SMC5-201ENST00000361138 GAGE5Q13069 117 aa11.04□□□□□ -0.64
SMC5-201ENST00000361138 GAGE6Q13070 117 aa11.04□□□□□ -0.64
SMC5-201ENST00000361138 SPANXDQ9BXN6 97 aa11.04□□□□□ -0.64
SMC5-201ENST00000361138 KIAA2026Q5HYC2 2103 aa11.04□□□□□ -0.64
SMC5-201ENST00000361138 SDK2Q58EX2 2172 aa11.04□□□□□ -0.64
SMC5-201ENST00000361138 STHQ8IWL8 128 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 C8orf31Q8N9H6 132 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 SPAG8Q99932 426 aaPredicted RBP11.03□□□□□ -0.64
SMC5-201ENST00000361138 P0C879 139 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 CTRLP40313 264 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 WFDC2Q14508 124 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 CFHR4Q92496 578 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 TP53TG3Q9ULZ0 132 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 GAGE12JA6NER3 117 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 I3L3M4 83 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 GAGE7O76087 117 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 GAGE12FP0CL80 117 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 GAGE12GP0CL81 117 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 GAGE12IP0CL82 117 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 GAGE4Q13068 117 aa11.03□□□□□ -0.64
SMC5-201ENST00000361138 C11orf68Q9H3H3 251 aaKnown RBP11.03□□□□□ -0.64
SMC5-201ENST00000361138 ANXA2RQ3ZCQ2 193 aa11.02□□□□□ -0.64
SMC5-201ENST00000361138 USMG5Q96IX5 58 aa11.02□□□□□ -0.64
SMC5-201ENST00000361138 E7EQL1 145 aa11.02□□□□□ -0.65
SMC5-201ENST00000361138 RBX1P62877 108 aa11.02□□□□□ -0.65
SMC5-201ENST00000361138 RHPN1-AS1Q9BWJ2 59 aa11.02□□□□□ -0.65
SMC5-201ENST00000361138 IGLV3-9A0A075B6K5 115 aa11.02□□□□□ -0.65
SMC5-201ENST00000361138 ZNF415Q09FC8 603 aa11.02□□□□□ -0.65
SMC5-201ENST00000361138 J3QQQ9 107 aa11.02□□□□□ -0.65
SMC5-201ENST00000361138 K7EMI3 77 aa11.02□□□□□ -0.65
SMC5-201ENST00000361138 NOTCH4Q99466 2003 aa11.01□□□□□ -0.65
SMC5-201ENST00000361138 B5MCH6 92 aa11.01□□□□□ -0.65
SMC5-201ENST00000361138 ATP6V0E1O15342 81 aa11.01□□□□□ -0.65
SMC5-201ENST00000361138 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
SMC5-201ENST00000361138 TMEM86BQ8N661 226 aa11.01□□□□□ -0.65
SMC5-201ENST00000361138 SDHAF1A6NFY7 115 aa11.01□□□□□ -0.65
SMC5-201ENST00000361138 GATA1P15976 413 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms