RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 EEF1AKMT3Q96AZ1 226 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 NDUFV3P56181 108 aaKnown RBP4.94□□□□□ -1.62
VPS13B-203ENST00000358544 FAM201AQ5SY85 155 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 NRXN2Q9P2S2 1712 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 C14orf178Q8N769 122 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-203ENST00000358544 C8orf49Q96NF6 230 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 TMEM243Q9BU79 118 aa4.94□□□□□ -1.62
VPS13B-203ENST00000358544 FLNAP21333 2647 aaKnown RBP4.93□□□□□ -1.62
VPS13B-203ENST00000358544 TMEM141Q96I45 108 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 TRAV13-1A0A0B4J241 112 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 PRR33A8MZF0 331 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 ZNF415Q09FC8 603 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 NSD1Q96L73 2696 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-203ENST00000358544 IGHV3OR16-8A0A075B7F1 116 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 TEN1Q86WV5 123 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 ANKRD29Q8N6D5 301 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 TOMM7Q9P0U1 55 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 HIGD1BQ9P298 99 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 LTAP01374 205 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 TFF2Q03403 129 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 FOXI2Q6ZQN5 318 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 TMEM14BQ9NUH8 114 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 DDB2Q92466 427 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 NUP210LQ5VU65 1888 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 ZFP36L1Q07352 338 aaKnown RBP4.93□□□□□ -1.62
VPS13B-203ENST00000358544 MRPL23Q16540 153 aaKnown RBP4.93□□□□□ -1.62
VPS13B-203ENST00000358544 GFRALQ6UXV0 394 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 IGKV3-7A0A075B6H7 116 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 HAX1O00165 279 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 DPH3P1Q9H4G8 78 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 MYOD1P15172 320 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 NPC2P61916 151 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 LEPROTO15243 131 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 RNF166Q96A37 237 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-203ENST00000358544 DNAJC30Q96LL9 226 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 YPEL4Q96NS1 127 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 NDUFB8O95169 186 aa4.93□□□□□ -1.62
VPS13B-203ENST00000358544 EFEMP2O95967 443 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 TRGV11A0A075B6L2 103 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 ATP5G1P05496 136 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 A0A087WX48 190 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 FAM90A27PA6NNH2 459 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 PMS2P5A8MQ11 134 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 TMEM258P61165 79 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 SNRPD3P62318 126 aaKnown RBP4.92□□□□□ -1.62
VPS13B-203ENST00000358544 C21orf140B9A014 251 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 J3QQQ9 107 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 VCYO14598 125 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 C20orf204Q6ZNR8 217 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 CR1LQ2VPA4 569 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 SOCS3O14543 225 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 FOXI1Q12951 378 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 TMEM75Q8N9X5 138 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 IMMP1LQ96LU5 166 aa4.92□□□□□ -1.62
VPS13B-203ENST00000358544 IGKV3D-15A0A087WSY6 115 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 IGKV3-15P01624 115 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 CD7P09564 240 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 LMO1P25800 156 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 FAM57AQ8TBR7 257 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 DKK2Q9UBU2 259 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 LYPD1Q8N2G4 141 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 PRR7Q8TB68 274 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 A0A0U1RRA0 63 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 RBMY1FQ15415 496 aaKnown RBP4.91□□□□□ -1.62
VPS13B-203ENST00000358544 DTX1Q86Y01 620 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 ZNF576Q9H609 170 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 PDE6HQ13956 83 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 TMEM133Q9H2Q1 129 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 ZNF474Q6S9Z5 364 aaPredicted RBP4.91□□□□□ -1.62
VPS13B-203ENST00000358544 C5orf64Q2M2E5 130 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 FOXL2NBQ6ZUU3 175 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 HS3ST6Q96QI5 342 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 RPUSD1Q9UJJ7 312 aaKnown RBP4.91□□□□□ -1.62
VPS13B-203ENST00000358544 VWC2LB2RUY7 222 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 PSG7Q13046 419 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 RASL10AQ92737 203 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 SPATA12Q7Z6I5 190 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 C3orf56Q8N813 242 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 IGF2BP2-AS1Q96M15 143 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 C1orf43Q9BWL3 253 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 MRPL35Q9NZE8 188 aaKnown RBP4.91□□□□□ -1.62
VPS13B-203ENST00000358544 FGF6P10767 208 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 SMIM2Q9BVW6 85 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 NDUFA12Q9UI09 145 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 ASPHD1Q5U4P2 390 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 CENPVQ7Z7K6 275 aaPredicted RBP4.91□□□□□ -1.62
VPS13B-203ENST00000358544 LY6G5BQ8NDX9 201 aa4.91□□□□□ -1.62
VPS13B-203ENST00000358544 CD177Q8N6Q3 437 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 TRBV19A0A075B6N1 114 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 FOXC1Q12948 553 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 Q6ZT83 130 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 IL17RELQ6ZVW7 336 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 SMRP1Q8NCR6 262 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 LRP4O75096 1905 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 FAM236AA0A1B0GUQ0 79 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 FAM236BA0A1B0GV22 79 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 A0A1W2PPI3 338 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 CCL3L1P16619 93 aa4.9□□□□□ -1.62
VPS13B-203ENST00000358544 C5orf47Q569G3 176 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms