RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 HOXA3O43365 443 aaPredicted RBP13.6□□□□□ -0.23
NPAS3-202ENST00000356141 CD99P14209 185 aa13.6□□□□□ -0.23
NPAS3-202ENST00000356141 ARL3P36405 182 aa13.6□□□□□ -0.23
NPAS3-202ENST00000356141 ACTL10Q5JWF8 245 aa13.6□□□□□ -0.23
NPAS3-202ENST00000356141 GPR82Q96P67 336 aa13.6□□□□□ -0.23
NPAS3-202ENST00000356141 MRPL18Q9H0U6 180 aaKnown RBP13.6□□□□□ -0.23
NPAS3-202ENST00000356141 OTORQ9NRC9 128 aa13.6□□□□□ -0.23
NPAS3-202ENST00000356141 NAT8BQ9UHF3 227 aa13.6□□□□□ -0.23
NPAS3-202ENST00000356141 PRAC2D3DTV9 90 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 BMPR1BO00238 502 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 PGLYRP4Q96LB8 373 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 PLA2G2AP14555 144 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 DSCR9P59020 149 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 FOXL1Q12952 345 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 Q86TA4 180 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 VGLL1Q99990 258 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 ZFAND3Q9H8U3 227 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 CLPSL1A2RUU4 121 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 HIGD1CA8MV81 97 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 IGLV2-11P01706 119 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 ZC2HC1AQ96GY0 325 aa13.59□□□□□ -0.23
NPAS3-202ENST00000356141 AAMDCQ9H7C9 122 aa13.58□□□□□ -0.24
NPAS3-202ENST00000356141 TEP1Q99973 2627 aaKnown RBP13.58□□□□□ -0.24
NPAS3-202ENST00000356141 UBE2V1Q13404 147 aa13.58□□□□□ -0.24
NPAS3-202ENST00000356141 STPG4Q8N801 248 aa13.58□□□□□ -0.24
NPAS3-202ENST00000356141 TMEM75Q8N9X5 138 aa13.58□□□□□ -0.24
NPAS3-202ENST00000356141 DAZAP1Q96EP5 407 aaKnown RBP13.58□□□□□ -0.24
NPAS3-202ENST00000356141 OR4X2Q8NGF9 303 aa13.57□□□□□ -0.24
NPAS3-202ENST00000356141 VN1R17PQ8TDU5 208 aa13.57□□□□□ -0.24
NPAS3-202ENST00000356141 BTF3L4Q96K17 158 aa13.57□□□□□ -0.24
NPAS3-202ENST00000356141 TMEM14CQ9P0S9 112 aa13.57□□□□□ -0.24
NPAS3-202ENST00000356141 P01737 135 aa13.57□□□□□ -0.24
NPAS3-202ENST00000356141 RIPPLY3P57055 190 aa13.57□□□□□ -0.24
NPAS3-202ENST00000356141 C11orf44Q8N8P7 122 aa13.57□□□□□ -0.24
NPAS3-202ENST00000356141 NUP35Q8NFH5 326 aa13.57□□□□□ -0.24
NPAS3-202ENST00000356141 OR2D3Q8NGH3 330 aa13.57□□□□□ -0.24
NPAS3-202ENST00000356141 OSTCQ9NRP0 149 aa13.57□□□□□ -0.24
NPAS3-202ENST00000356141 J3QKU1 62 aa13.56□□□□□ -0.24
NPAS3-202ENST00000356141 PSG8Q9UQ74 426 aa13.56□□□□□ -0.24
NPAS3-202ENST00000356141 DIRC3C9JPN6 131 aa13.56□□□□□ -0.24
NPAS3-202ENST00000356141 IGHG2P01859 326 aa13.56□□□□□ -0.24
NPAS3-202ENST00000356141 LTAP01374 205 aa13.55□□□□□ -0.24
NPAS3-202ENST00000356141 Q6ZQT7 251 aa13.55□□□□□ -0.24
NPAS3-202ENST00000356141 MRPL52Q86TS9 123 aaKnown RBP13.55□□□□□ -0.24
NPAS3-202ENST00000356141 KRTAP1-3Q8IUG1 177 aa13.55□□□□□ -0.24
NPAS3-202ENST00000356141 MAST4O15021 2626 aa13.55□□□□□ -0.24
NPAS3-202ENST00000356141 CHEK1O14757 476 aa13.55□□□□□ -0.24
NPAS3-202ENST00000356141 BUB3O43684 328 aa13.55□□□□□ -0.24
NPAS3-202ENST00000356141 RPL7P18124 248 aaKnown RBP13.55□□□□□ -0.24
NPAS3-202ENST00000356141 PPIFP30405 207 aaKnown RBP13.55□□□□□ -0.24
NPAS3-202ENST00000356141 WFDC3Q8IUB2 231 aa13.55□□□□□ -0.24
NPAS3-202ENST00000356141 FMC1Q96HJ9 113 aa13.55□□□□□ -0.24
NPAS3-202ENST00000356141 SCGB2A2Q13296 93 aa13.54□□□□□ -0.24
NPAS3-202ENST00000356141 GDF5OSQ5U4N7 250 aa13.54□□□□□ -0.24
NPAS3-202ENST00000356141 ERASQ7Z444 233 aa13.54□□□□□ -0.24
NPAS3-202ENST00000356141 GTSF1Q8WW33 167 aa13.54□□□□□ -0.24
NPAS3-202ENST00000356141 DUX3Q96PT4 197 aa13.54□□□□□ -0.24
NPAS3-202ENST00000356141 LY96Q9Y6Y9 160 aa13.54□□□□□ -0.24
NPAS3-202ENST00000356141 NOTCH3Q9UM47 2321 aa13.54□□□□□ -0.24
NPAS3-202ENST00000356141 ORAOV1Q8WV07 137 aa13.54□□□□□ -0.24
NPAS3-202ENST00000356141 METTL26Q96S19 204 aa13.54□□□□□ -0.24
NPAS3-202ENST00000356141 MLST8Q9BVC4 326 aa13.54□□□□□ -0.24
NPAS3-202ENST00000356141 SCGB2A1O75556 95 aa13.53□□□□□ -0.24
NPAS3-202ENST00000356141 IGHG4P01861 327 aa13.53□□□□□ -0.24
NPAS3-202ENST00000356141 CRIP1P50238 77 aa13.53□□□□□ -0.24
NPAS3-202ENST00000356141 RAB9AP51151 201 aa13.53□□□□□ -0.24
NPAS3-202ENST00000356141 ID1P41134 155 aa13.53□□□□□ -0.24
NPAS3-202ENST00000356141 PSG3Q16557 428 aa13.53□□□□□ -0.24
NPAS3-202ENST00000356141 DEFB136Q30KP8 78 aa13.53□□□□□ -0.24
NPAS3-202ENST00000356141 KHDC1LQ5JSQ8 128 aa13.53□□□□□ -0.24
NPAS3-202ENST00000356141 GLMPQ8WWB7 406 aa13.53□□□□□ -0.24
NPAS3-202ENST00000356141 KLF12Q9Y4X4 402 aa13.53□□□□□ -0.24
NPAS3-202ENST00000356141 TRBV7-1A0A0A6YYK4 115 aa13.52□□□□□ -0.24
NPAS3-202ENST00000356141 SAP30O75446 220 aa13.52□□□□□ -0.24
NPAS3-202ENST00000356141 TYMSP04818 313 aa13.52□□□□□ -0.24
NPAS3-202ENST00000356141 CSN1S1P47710 185 aa13.52□□□□□ -0.24
NPAS3-202ENST00000356141 LOXL1Q08397 574 aaPredicted RBP13.52□□□□□ -0.24
NPAS3-202ENST00000356141 C18orf65Q6ZTR6 163 aa13.52□□□□□ -0.24
NPAS3-202ENST00000356141 FOXA3P55318 350 aaPredicted RBP13.52□□□□□ -0.25
NPAS3-202ENST00000356141 OCIAD2Q56VL3 154 aa13.52□□□□□ -0.25
NPAS3-202ENST00000356141 C19orf54Q5BKX5 351 aa13.52□□□□□ -0.25
NPAS3-202ENST00000356141 RPP21Q9H633 154 aaKnown RBP13.52□□□□□ -0.25
NPAS3-202ENST00000356141 OTOGQ6ZRI0 2925 aa13.51□□□□□ -0.25
NPAS3-202ENST00000356141 SMIM27A0A1W2PRY6 76 aa13.51□□□□□ -0.25
NPAS3-202ENST00000356141 LCN12Q6JVE5 192 aa13.51□□□□□ -0.25
NPAS3-202ENST00000356141 SMR3AQ99954 134 aa13.51□□□□□ -0.25
NPAS3-202ENST00000356141 ZNF331Q9NQX6 463 aaPredicted RBP13.51□□□□□ -0.25
NPAS3-202ENST00000356141 FAM181BA6NEQ2 426 aa13.51□□□□□ -0.25
NPAS3-202ENST00000356141 IGF1P05019 195 aa13.51□□□□□ -0.25
NPAS3-202ENST00000356141 SRIP30626 198 aa13.51□□□□□ -0.25
NPAS3-202ENST00000356141 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.51□□□□□ -0.25
NPAS3-202ENST00000356141 SIGLECL1Q8N7X8 197 aa13.51□□□□□ -0.25
NPAS3-202ENST00000356141 VAMP8Q9BV40 100 aa13.51□□□□□ -0.25
NPAS3-202ENST00000356141 F6UB75 175 aa13.5□□□□□ -0.25
NPAS3-202ENST00000356141 SPRY2O43597 315 aa13.5□□□□□ -0.25
NPAS3-202ENST00000356141 ZNF80P51504 273 aaPredicted RBP13.5□□□□□ -0.25
NPAS3-202ENST00000356141 TMEM136Q6ZRR5 245 aa13.5□□□□□ -0.25
NPAS3-202ENST00000356141 BAGE3Q86Y29 109 aa13.5□□□□□ -0.25
NPAS3-202ENST00000356141 GRAMD2BQ96HH9 432 aa13.5□□□□□ -0.25
NPAS3-202ENST00000356141 GATA3P23771 443 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms