RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TMEM256Q8N2U0 113 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 C9orf62Q8N4C0 152 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 LINC00612Q8N6U2 182 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 HSD17B11Q8NBQ5 300 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 RPUSD4Q96CM3 377 aaKnown RBP11.06□□□□□ -0.64
PDGFA-201ENST00000354513 LINC01587Q99440 93 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 ATG101Q9BSB4 218 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 KRTAP1-5Q9BYS1 174 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 ZNF331Q9NQX6 463 aaPredicted RBP11.06□□□□□ -0.64
PDGFA-201ENST00000354513 KCNIP2Q9NS61 270 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 PXMP4Q9Y6I8 212 aa11.06□□□□□ -0.64
PDGFA-201ENST00000354513 S100A7P31151 101 aa11.05□□□□□ -0.64
PDGFA-201ENST00000354513 Q6ZRG5 221 aa11.05□□□□□ -0.64
PDGFA-201ENST00000354513 C6orf223Q8N319 242 aa11.05□□□□□ -0.64
PDGFA-201ENST00000354513 C16orf74Q96GX8 76 aa11.05□□□□□ -0.64
PDGFA-201ENST00000354513 ZNF471Q9BX82 626 aaPredicted RBP11.05□□□□□ -0.64
PDGFA-201ENST00000354513 SLC39A9Q9NUM3 307 aa11.05□□□□□ -0.64
PDGFA-201ENST00000354513 ATP6V0CP27449 155 aa11.04□□□□□ -0.64
PDGFA-201ENST00000354513 CDKN1BP46527 198 aa11.04□□□□□ -0.64
PDGFA-201ENST00000354513 PXDC1Q5TGL8 231 aa11.04□□□□□ -0.64
PDGFA-201ENST00000354513 H3BTX0 84 aa11.03□□□□□ -0.64
PDGFA-201ENST00000354513 COX7A2P2O60397 106 aa11.03□□□□□ -0.64
PDGFA-201ENST00000354513 FFAR4Q5NUL3 377 aa11.03□□□□□ -0.64
PDGFA-201ENST00000354513 GFI1BQ5VTD9 330 aa11.03□□□□□ -0.64
PDGFA-201ENST00000354513 LCN15Q6UWW0 184 aa11.03□□□□□ -0.64
PDGFA-201ENST00000354513 TMEM263Q8WUH6 116 aaKnown RBP11.03□□□□□ -0.64
PDGFA-201ENST00000354513 TMEM37Q8WXS4 190 aa11.03□□□□□ -0.64
PDGFA-201ENST00000354513 GNPNAT1Q96EK6 184 aaPredicted RBP11.03□□□□□ -0.64
PDGFA-201ENST00000354513 NOP10Q9NPE3 64 aaKnown RBP11.03□□□□□ -0.64
PDGFA-201ENST00000354513 TIMM9Q9Y5J7 89 aa11.03□□□□□ -0.64
PDGFA-201ENST00000354513 TIMM8BQ9Y5J9 83 aaPredicted RBP11.03□□□□□ -0.64
PDGFA-201ENST00000354513 C16orf90A8MZG2 172 aa11.02□□□□□ -0.65
PDGFA-201ENST00000354513 IGLC2P0DOY2 106 aa11.02□□□□□ -0.65
PDGFA-201ENST00000354513 HTN1P15515 57 aa11.02□□□□□ -0.65
PDGFA-201ENST00000354513 HOXA5P20719 270 aa11.02□□□□□ -0.65
PDGFA-201ENST00000354513 EIF5AP63241 154 aaKnown RBP11.02□□□□□ -0.65
PDGFA-201ENST00000354513 LINC00305Q7Z4B0 112 aa11.02□□□□□ -0.65
PDGFA-201ENST00000354513 OR1L4Q8NGR5 311 aa11.02□□□□□ -0.65
PDGFA-201ENST00000354513 PSMG3Q9BT73 122 aaPredicted RBP11.02□□□□□ -0.65
PDGFA-201ENST00000354513 SH3BGRL3Q9H299 93 aa11.02□□□□□ -0.65
PDGFA-201ENST00000354513 H3BQ15 152 aa11.01□□□□□ -0.65
PDGFA-201ENST00000354513 CDK2AP2O75956 126 aa11.01□□□□□ -0.65
PDGFA-201ENST00000354513 C10orf113Q5VZT2 155 aa11.01□□□□□ -0.65
PDGFA-201ENST00000354513 ZNF493Q6ZR52 646 aa11.01□□□□□ -0.65
PDGFA-201ENST00000354513 SSX7Q7RTT5 188 aa11.01□□□□□ -0.65
PDGFA-201ENST00000354513 SAT2Q96F10 170 aaPredicted RBP11.01□□□□□ -0.65
PDGFA-201ENST00000354513 PFDN5Q99471 154 aa11.01□□□□□ -0.65
PDGFA-201ENST00000354513 SLC50A1Q9BRV3 221 aa11.01□□□□□ -0.65
PDGFA-201ENST00000354513 DNAJC4Q9NNZ3 241 aa11.01□□□□□ -0.65
PDGFA-201ENST00000354513 H7BYZ3 331 aa11□□□□□ -0.65
PDGFA-201ENST00000354513 CCL18P55774 89 aa11□□□□□ -0.65
PDGFA-201ENST00000354513 GCSAMLQ5JQS6 135 aa11□□□□□ -0.65
PDGFA-201ENST00000354513 S100A7AQ86SG5 101 aa11□□□□□ -0.65
PDGFA-201ENST00000354513 OR2G3Q8NGZ4 309 aa11□□□□□ -0.65
PDGFA-201ENST00000354513 LRRC20Q8TCA0 184 aa11□□□□□ -0.65
PDGFA-201ENST00000354513 C20orf144Q9BQM9 153 aa11□□□□□ -0.65
PDGFA-201ENST00000354513 PPP1R14DQ9NXH3 145 aa11□□□□□ -0.65
PDGFA-201ENST00000354513 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
PDGFA-201ENST00000354513 TRAV26-1A0A087WT03 109 aa10.99□□□□□ -0.65
PDGFA-201ENST00000354513 CT45A10P0DMU9 189 aa10.99□□□□□ -0.65
PDGFA-201ENST00000354513 TPT1P13693 172 aaKnown RBP10.99□□□□□ -0.65
PDGFA-201ENST00000354513 SERF2P84101 59 aa10.99□□□□□ -0.65
PDGFA-201ENST00000354513 ACOT6Q3I5F7 207 aaPredicted RBP10.99□□□□□ -0.65
PDGFA-201ENST00000354513 SLC51BQ86UW2 128 aa10.99□□□□□ -0.65
PDGFA-201ENST00000354513 STOML3Q8TAV4 291 aa10.99□□□□□ -0.65
PDGFA-201ENST00000354513 TRAV5A0A0B4J249 113 aa10.98□□□□□ -0.65
PDGFA-201ENST00000354513 BPIFA4PQ86YQ2 179 aa10.98□□□□□ -0.65
PDGFA-201ENST00000354513 A0A0J9YY99 117 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 GAGE12BA1L429 117 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 NPIPB6E9PJ23 425 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 GAGE7O76087 117 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 MBP02144 154 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 GAGE12FP0CL80 117 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 GAGE12GP0CL81 117 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 GAGE12IP0CL82 117 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 M6PRP20645 277 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 RAB2AP61019 212 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 ESRGQ1W209 222 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 RXFP4Q8TDU9 374 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 UPK3BQ9BT76 320 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 Q9H8V8 135 aa10.97□□□□□ -0.65
PDGFA-201ENST00000354513 J3KRW8 73 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 SEC11BP0C7V7 166 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 OR5I1Q13606 314 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 AKR1C8PQ5T2L2 129 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 MAPKAPK5-AS1Q8N8E1 139 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 OR10G4Q8NGN3 311 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 OR10G9Q8NGN4 311 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 OR10G7Q8NGN6 311 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 OR10J6PQ8NGY7 276 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 ZNF503Q96F45 646 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 ODF3Q96PU9 254 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 Q9H3A6 140 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 TMPRSS5Q9H3S3 457 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 ZNF586Q9NXT0 402 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 RNF24Q9Y225 148 aa10.96□□□□□ -0.65
PDGFA-201ENST00000354513 TRAV12-3A0A0B4J271 114 aa10.95□□□□□ -0.66
PDGFA-201ENST00000354513 KRTAP10-2P60368 255 aa10.95□□□□□ -0.66
PDGFA-201ENST00000354513 FAM122CQ6P4D5 195 aa10.95□□□□□ -0.66
PDGFA-201ENST00000354513 Q6ZTI0 123 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms