RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 NBEAP1P0C6P0 100 aa11.9□□□□□ -0.5
BRCC3-202ENST00000340647 HOXA5P20719 270 aa11.9□□□□□ -0.5
BRCC3-202ENST00000340647 ATP5G3P48201 142 aa11.9□□□□□ -0.5
BRCC3-202ENST00000340647 BTN1A1Q13410 526 aa11.9□□□□□ -0.5
BRCC3-202ENST00000340647 ICAM4Q14773 271 aa11.9□□□□□ -0.5
BRCC3-202ENST00000340647 ZFAND2AQ8N6M9 145 aa11.9□□□□□ -0.5
BRCC3-202ENST00000340647 C15orf53Q8NAA6 179 aa11.9□□□□□ -0.5
BRCC3-202ENST00000340647 C11orf72Q8NBR9 251 aa11.9□□□□□ -0.5
BRCC3-202ENST00000340647 PHYHIPLQ96FC7 376 aa11.9□□□□□ -0.5
BRCC3-202ENST00000340647 MUC4Q99102 2169 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 OR10J4P0C629 311 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 CRISP2P16562 243 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 LEPP41159 167 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 LINC00336Q6ZUF6 198 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 RNF141Q8WVD5 230 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 LINC00477Q96M19 166 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 ATP5SQ99766 215 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 OR51M1Q9H341 326 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 MBD2Q9UBB5 411 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 FUT9Q9Y231 359 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 PRELID1Q9Y255 219 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 TIMM9Q9Y5J7 89 aa11.89□□□□□ -0.51
BRCC3-202ENST00000340647 SSNA1O43805 119 aa11.88□□□□□ -0.51
BRCC3-202ENST00000340647 SLC25A5P05141 298 aaKnown RBP11.88□□□□□ -0.51
BRCC3-202ENST00000340647 FAM122CQ6P4D5 195 aa11.88□□□□□ -0.51
BRCC3-202ENST00000340647 UBE2DNLQ8IWF7 75 aa11.88□□□□□ -0.51
BRCC3-202ENST00000340647 ZNRF2Q8NHG8 242 aa11.88□□□□□ -0.51
BRCC3-202ENST00000340647 MRPL32Q9BYC8 188 aaKnown RBP11.88□□□□□ -0.51
BRCC3-202ENST00000340647 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
BRCC3-202ENST00000340647 C7orf71A4D174 169 aa11.87□□□□□ -0.51
BRCC3-202ENST00000340647 RPL12P30050 165 aaKnown RBP11.87□□□□□ -0.51
BRCC3-202ENST00000340647 Q6ZTI0 123 aa11.87□□□□□ -0.51
BRCC3-202ENST00000340647 PYGO2Q9BRQ0 406 aa11.87□□□□□ -0.51
BRCC3-202ENST00000340647 LINC00467Q9BRT7 94 aa11.87□□□□□ -0.51
BRCC3-202ENST00000340647 PAXXQ9BUH6 204 aa11.87□□□□□ -0.51
BRCC3-202ENST00000340647 LINC00588Q9Y4M8 146 aa11.87□□□□□ -0.51
BRCC3-202ENST00000340647 ALG5Q9Y673 324 aa11.87□□□□□ -0.51
BRCC3-202ENST00000340647 GAGE12BA1L429 117 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 PRSS29PA6NIE9 313 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 GAGE7O76087 117 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 GAGE12FP0CL80 117 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 GAGE12GP0CL81 117 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 GAGE12IP0CL82 117 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 DEFA1P59665 94 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 DEFA3P59666 94 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 DAZ2Q13117 558 aaKnown RBP11.86□□□□□ -0.51
BRCC3-202ENST00000340647 BATF3Q9NR55 127 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 GSN-AS1Q9NRJ2 163 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 ZNF492Q9P255 531 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 TP53TG3Q9ULZ0 132 aa11.86□□□□□ -0.51
BRCC3-202ENST00000340647 NUDT3O95989 172 aa11.85□□□□□ -0.51
BRCC3-202ENST00000340647 FFAR4Q5NUL3 377 aa11.85□□□□□ -0.51
BRCC3-202ENST00000340647 RNASE4P34096 147 aaKnown RBP11.84□□□□□ -0.51
BRCC3-202ENST00000340647 ANXA2RQ3ZCQ2 193 aa11.84□□□□□ -0.51
BRCC3-202ENST00000340647 CCDC28AQ8IWP9 274 aa11.84□□□□□ -0.51
BRCC3-202ENST00000340647 Q8TAT8 98 aa11.84□□□□□ -0.51
BRCC3-202ENST00000340647 TMPRSS5Q9H3S3 457 aa11.84□□□□□ -0.51
BRCC3-202ENST00000340647 AAMDCQ9H7C9 122 aa11.84□□□□□ -0.51
BRCC3-202ENST00000340647 KLF12Q9Y4X4 402 aa11.84□□□□□ -0.51
BRCC3-202ENST00000340647 TRAV26-1A0A087WT03 109 aa11.83□□□□□ -0.52
BRCC3-202ENST00000340647 NMBP08949 121 aa11.83□□□□□ -0.52
BRCC3-202ENST00000340647 RANP62826 216 aaKnown RBP11.83□□□□□ -0.52
BRCC3-202ENST00000340647 Q5BKY6 102 aa11.83□□□□□ -0.52
BRCC3-202ENST00000340647 Q9H3A6 140 aa11.83□□□□□ -0.52
BRCC3-202ENST00000340647 KCNIP2Q9NS61 270 aa11.83□□□□□ -0.52
BRCC3-202ENST00000340647 SNURFLB1AK76 121 aa11.82□□□□□ -0.52
BRCC3-202ENST00000340647 C17orf112F2Z3M2 114 aa11.82□□□□□ -0.52
BRCC3-202ENST00000340647 OR7C2O60412 319 aa11.82□□□□□ -0.52
BRCC3-202ENST00000340647 FAM3BP58499 235 aaPredicted RBP11.82□□□□□ -0.52
BRCC3-202ENST00000340647 OR5I1Q13606 314 aa11.82□□□□□ -0.52
BRCC3-202ENST00000340647 EIF4E3Q8N5X7 224 aaKnown RBP11.82□□□□□ -0.52
BRCC3-202ENST00000340647 VSIG2Q96IQ7 327 aa11.82□□□□□ -0.52
BRCC3-202ENST00000340647 C18orf15Q96N68 181 aa11.82□□□□□ -0.52
BRCC3-202ENST00000340647 A0A0J9YY99 117 aa11.81□□□□□ -0.52
BRCC3-202ENST00000340647 SPINK4O60575 86 aa11.81□□□□□ -0.52
BRCC3-202ENST00000340647 GPX1P07203 203 aa11.81□□□□□ -0.52
BRCC3-202ENST00000340647 ZNF138P52744 262 aa11.81□□□□□ -0.52
BRCC3-202ENST00000340647 TCL1AP56279 114 aa11.81□□□□□ -0.52
BRCC3-202ENST00000340647 RXFP4Q8TDU9 374 aa11.81□□□□□ -0.52
BRCC3-202ENST00000340647 KRTAP1-5Q9BYS1 174 aa11.81□□□□□ -0.52
BRCC3-202ENST00000340647 LRP1BQ9NZR2 4599 aa11.81□□□□□ -0.52
BRCC3-202ENST00000340647 NBDYA0A0U1RRE5 68 aa11.8□□□□□ -0.52
BRCC3-202ENST00000340647 DIRC3C9JPN6 131 aa11.8□□□□□ -0.52
BRCC3-202ENST00000340647 PET100P0DJ07 73 aa11.8□□□□□ -0.52
BRCC3-202ENST00000340647 M6PRP20645 277 aa11.8□□□□□ -0.52
BRCC3-202ENST00000340647 RAB2AP61019 212 aa11.8□□□□□ -0.52
BRCC3-202ENST00000340647 UBE2L3P68036 154 aaKnown RBP11.8□□□□□ -0.52
BRCC3-202ENST00000340647 ESRGQ1W209 222 aa11.8□□□□□ -0.52
BRCC3-202ENST00000340647 TMEM78Q5T7P6 136 aa11.8□□□□□ -0.52
BRCC3-202ENST00000340647 SSX7Q7RTT5 188 aa11.8□□□□□ -0.52
BRCC3-202ENST00000340647 LYPD1Q8N2G4 141 aa11.8□□□□□ -0.52
BRCC3-202ENST00000340647 IGHV1OR15-1A0A075B7D0 117 aa11.79□□□□□ -0.52
BRCC3-202ENST00000340647 TRBV7-9A0A0J9YWB2 115 aa11.79□□□□□ -0.52
BRCC3-202ENST00000340647 RBAKDNA6NC62 111 aa11.79□□□□□ -0.52
BRCC3-202ENST00000340647 IFNA5P01569 189 aa11.79□□□□□ -0.52
BRCC3-202ENST00000340647 C1orf134Q5TEV5 83 aa11.79□□□□□ -0.52
BRCC3-202ENST00000340647 ZNF680Q8NEM1 530 aa11.79□□□□□ -0.52
BRCC3-202ENST00000340647 SCGB1C1Q8TD33 95 aa11.79□□□□□ -0.52
BRCC3-202ENST00000340647 GNPNAT1Q96EK6 184 aaPredicted RBP11.79□□□□□ -0.52
BRCC3-202ENST00000340647 TVP23CQ96ET8 276 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms