RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 POLQO75417 2590 aa12.2□□□□□ -0.46
CCDC144A-202ENST00000340621 IGHV3-11P01762 117 aa12.2□□□□□ -0.46
CCDC144A-202ENST00000340621 LCNL1Q6ZST4 164 aa12.2□□□□□ -0.46
CCDC144A-202ENST00000340621 C8orf86Q6ZUL3 223 aa12.2□□□□□ -0.46
CCDC144A-202ENST00000340621 M0R2Z0 102 aa12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 BRI3O95415 125 aa12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 PF4V1P10720 104 aa12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 USMG5Q96IX5 58 aa12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 USP9YO00507 2555 aaPredicted RBP12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 KIR2DL5BA0A0G2JN68 375 aa12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 KIR2DL5BA0A0G2JPC4 375 aa12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 BMI1P35226 326 aa12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 KIR2DL5AQ8N109 375 aa12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 BORCS7Q96B45 105 aa12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 NDUFAF3Q9BU61 184 aa12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 ZANQ9Y493 2812 aa12.19□□□□□ -0.46
CCDC144A-202ENST00000340621 MUC21A0A0G2JKD1 596 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 MUC21A0A140T8X8 626 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 A0A1B0GW15 77 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 H3BUA1 57 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 MUC21Q5SSG8 566 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 GATD1Q8NB37 220 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 AGPAT4-IT1Q9H0P7 198 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 RBAKDNA6NC62 111 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 SMAD7O15105 426 aaKnown RBP12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 TGFAP01135 160 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 IGLV1-40P01703 118 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 IGHV4-59P01825 116 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 ZNF138P52744 262 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 KRTAP10-9P60411 292 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 PMCHL1Q16048 86 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 DEFB112Q30KQ8 113 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 GLMPQ8WWB7 406 aa12.18□□□□□ -0.46
CCDC144A-202ENST00000340621 TMEM213A2RRL7 107 aa12.17□□□□□ -0.46
CCDC144A-202ENST00000340621 FAM181BA6NEQ2 426 aa12.17□□□□□ -0.46
CCDC144A-202ENST00000340621 NDUFA4O00483 81 aa12.17□□□□□ -0.46
CCDC144A-202ENST00000340621 EBLN2Q6P2I7 272 aa12.17□□□□□ -0.46
CCDC144A-202ENST00000340621 IL17RELQ6ZVW7 336 aa12.17□□□□□ -0.46
CCDC144A-202ENST00000340621 PAM16Q9Y3D7 125 aa12.17□□□□□ -0.46
CCDC144A-202ENST00000340621 OR4X2Q8NGF9 303 aa12.17□□□□□ -0.46
CCDC144A-202ENST00000340621 FABP5P3A8MUU1 101 aa12.16□□□□□ -0.46
CCDC144A-202ENST00000340621 ORM1P02763 201 aa12.16□□□□□ -0.46
CCDC144A-202ENST00000340621 LINC00614P0C842 121 aa12.16□□□□□ -0.46
CCDC144A-202ENST00000340621 ZNF493Q6ZR52 646 aa12.16□□□□□ -0.46
CCDC144A-202ENST00000340621 PSMG3-AS1Q96PY0 264 aa12.16□□□□□ -0.46
CCDC144A-202ENST00000340621 VAMP8Q9BV40 100 aa12.16□□□□□ -0.46
CCDC144A-202ENST00000340621 CSPG4Q6UVK1 2322 aa12.16□□□□□ -0.46
CCDC144A-202ENST00000340621 CFHR3Q02985 330 aa12.15□□□□□ -0.46
CCDC144A-202ENST00000340621 TMEM95Q3KNT9 176 aa12.15□□□□□ -0.46
CCDC144A-202ENST00000340621 CHCHD1Q96BP2 118 aaKnown RBP12.15□□□□□ -0.46
CCDC144A-202ENST00000340621 EPG5Q9HCE0 2579 aa12.15□□□□□ -0.46
CCDC144A-202ENST00000340621 RNF223E7ERA6 249 aa12.15□□□□□ -0.46
CCDC144A-202ENST00000340621 RPS20P60866 119 aaKnown RBP12.15□□□□□ -0.46
CCDC144A-202ENST00000340621 C16orf92Q96LL3 132 aa12.15□□□□□ -0.46
CCDC144A-202ENST00000340621 ANKRD17O75179 2603 aaKnown RBP12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 C2orf70A6NJV1 201 aa12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 FER1L6-AS1Q8NA97 138 aa12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 MRPL53Q96EL3 112 aaKnown RBP12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 C20orf144Q9BQM9 153 aa12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 IGHV1-24A0A0C4DH33 117 aa12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 CSN3P07498 182 aa12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 SRSF2Q01130 221 aaKnown RBP12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 GPHB5Q86YW7 130 aa12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 C20orf173Q96LM9 149 aa12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 CLEC5AQ9NY25 188 aa12.14□□□□□ -0.47
CCDC144A-202ENST00000340621 A0A0G2JLM5 398 aa12.13□□□□□ -0.47
CCDC144A-202ENST00000340621 J3QLI3 93 aa12.13□□□□□ -0.47
CCDC144A-202ENST00000340621 CTRLP40313 264 aa12.13□□□□□ -0.47
CCDC144A-202ENST00000340621 LBHQ53QV2 105 aaPredicted RBP12.13□□□□□ -0.47
CCDC144A-202ENST00000340621 TMEM78Q5T7P6 136 aa12.13□□□□□ -0.47
CCDC144A-202ENST00000340621 NPFFR1Q9GZQ6 430 aa12.13□□□□□ -0.47
CCDC144A-202ENST00000340621 TWIST1Q15672 202 aa12.13□□□□□ -0.47
CCDC144A-202ENST00000340621 FAM104BQ5XKR9 115 aa12.13□□□□□ -0.47
CCDC144A-202ENST00000340621 C9orf47Q6ZRZ4 202 aa12.13□□□□□ -0.47
CCDC144A-202ENST00000340621 AMN1Q8IY45 258 aa12.13□□□□□ -0.47
CCDC144A-202ENST00000340621 BTF3P20290 206 aaKnown RBP12.12□□□□□ -0.47
CCDC144A-202ENST00000340621 LOXL1Q08397 574 aaPredicted RBP12.12□□□□□ -0.47
CCDC144A-202ENST00000340621 PTPN13Q12923 2485 aa12.12□□□□□ -0.47
CCDC144A-202ENST00000340621 LINC01559Q495D7 138 aa12.11□□□□□ -0.47
CCDC144A-202ENST00000340621 TM4SF20Q53R12 229 aa12.11□□□□□ -0.47
CCDC144A-202ENST00000340621 LINC00173Q6ZV60 143 aa12.11□□□□□ -0.47
CCDC144A-202ENST00000340621 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
CCDC144A-202ENST00000340621 MSRB1Q9NZV6 116 aa12.11□□□□□ -0.47
CCDC144A-202ENST00000340621 C11orf21Q9P2W6 132 aa12.11□□□□□ -0.47
CCDC144A-202ENST00000340621 D6R8Y8 96 aa12.11□□□□□ -0.47
CCDC144A-202ENST00000340621 Q6ZQT7 251 aa12.11□□□□□ -0.47
CCDC144A-202ENST00000340621 MIEN1Q9BRT3 115 aa12.11□□□□□ -0.47
CCDC144A-202ENST00000340621 IGKV3D-20A0A0C4DH25 116 aa12.1□□□□□ -0.47
CCDC144A-202ENST00000340621 C10orf99Q6UWK7 81 aa12.1□□□□□ -0.47
CCDC144A-202ENST00000340621 C9orf139Q6ZV77 190 aa12.1□□□□□ -0.47
CCDC144A-202ENST00000340621 SPATA12Q7Z6I5 190 aa12.1□□□□□ -0.47
CCDC144A-202ENST00000340621 SELENOKQ9Y6D0 94 aa12.1□□□□□ -0.47
CCDC144A-202ENST00000340621 U3KQK5 164 aa12.1□□□□□ -0.47
CCDC144A-202ENST00000340621 MXRA5Q9NR99 2828 aa12.1□□□□□ -0.47
CCDC144A-202ENST00000340621 SOCS3O14543 225 aa12.1□□□□□ -0.47
CCDC144A-202ENST00000340621 IGHV4-31P0DP07 118 aa12.1□□□□□ -0.47
CCDC144A-202ENST00000340621 RPL11P62913 178 aaKnown RBP12.1□□□□□ -0.47
CCDC144A-202ENST00000340621 ZNF738Q8NE65 137 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms