RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 ATP5G2Q06055 141 aa12.53□□□□□ -0.4
USP43-201ENST00000285199 ASIPP42127 132 aa12.53□□□□□ -0.4
USP43-201ENST00000285199 MRPL35Q9NZE8 188 aaKnown RBP12.53□□□□□ -0.4
USP43-201ENST00000285199 PPBPP02775 128 aa12.53□□□□□ -0.4
USP43-201ENST00000285199 FAM106AQ4KMX7 169 aa12.53□□□□□ -0.4
USP43-201ENST00000285199 NEGR1Q7Z3B1 354 aa12.53□□□□□ -0.4
USP43-201ENST00000285199 TRBV19A0A075B6N1 114 aa12.52□□□□□ -0.4
USP43-201ENST00000285199 FNDC10F2Z333 226 aa12.52□□□□□ -0.4
USP43-201ENST00000285199 LAGE3Q14657 143 aa12.52□□□□□ -0.4
USP43-201ENST00000285199 C2orf70A6NJV1 201 aa12.52□□□□□ -0.41
USP43-201ENST00000285199 MSMPQ1L6U9 139 aa12.52□□□□□ -0.41
USP43-201ENST00000285199 A0A1W2PPM0 123 aa12.52□□□□□ -0.41
USP43-201ENST00000285199 C22orf46C9J442 243 aa12.52□□□□□ -0.41
USP43-201ENST00000285199 K7EP34 96 aa12.51□□□□□ -0.41
USP43-201ENST00000285199 LINC00310P59036 64 aa12.51□□□□□ -0.41
USP43-201ENST00000285199 VGLL1Q99990 258 aa12.51□□□□□ -0.41
USP43-201ENST00000285199 ANAPC13Q9BS18 74 aa12.51□□□□□ -0.41
USP43-201ENST00000285199 COX6CP09669 75 aa12.51□□□□□ -0.41
USP43-201ENST00000285199 LOXL1Q08397 574 aaPredicted RBP12.51□□□□□ -0.41
USP43-201ENST00000285199 FAM57AQ8TBR7 257 aa12.51□□□□□ -0.41
USP43-201ENST00000285199 IGF2BP2-AS1Q96M15 143 aa12.51□□□□□ -0.41
USP43-201ENST00000285199 BUB1B-PAK6H3BSN5 160 aa12.51□□□□□ -0.41
USP43-201ENST00000285199 NDUFS8O00217 210 aa12.51□□□□□ -0.41
USP43-201ENST00000285199 SHANK2-AS3Q9BTD1 123 aa12.51□□□□□ -0.41
USP43-201ENST00000285199 CD7P09564 240 aa12.5□□□□□ -0.41
USP43-201ENST00000285199 ANXA2RQ3ZCQ2 193 aa12.5□□□□□ -0.41
USP43-201ENST00000285199 TECTAO75443 2155 aa12.5□□□□□ -0.41
USP43-201ENST00000285199 NDUFS7O75251 213 aa12.5□□□□□ -0.41
USP43-201ENST00000285199 SPINK8P0C7L1 97 aa12.5□□□□□ -0.41
USP43-201ENST00000285199 EEF1AKMT3Q96AZ1 226 aa12.5□□□□□ -0.41
USP43-201ENST00000285199 TMEM131Q92545 1883 aa12.5□□□□□ -0.41
USP43-201ENST00000285199 P0C879 139 aa12.5□□□□□ -0.41
USP43-201ENST00000285199 CSTL1Q9H114 145 aa12.5□□□□□ -0.41
USP43-201ENST00000285199 IGLV2-8P01709 118 aa12.49□□□□□ -0.41
USP43-201ENST00000285199 IGLC1P0CG04 106 aa12.49□□□□□ -0.41
USP43-201ENST00000285199 TNRC6AQ8NDV7 1962 aaKnown RBP12.49□□□□□ -0.41
USP43-201ENST00000285199 ZNF492Q9P255 531 aa12.49□□□□□ -0.41
USP43-201ENST00000285199 HAX1O00165 279 aa12.49□□□□□ -0.41
USP43-201ENST00000285199 CEACAM4O75871 244 aa12.49□□□□□ -0.41
USP43-201ENST00000285199 ZNF672Q499Z4 452 aaPredicted RBP12.49□□□□□ -0.41
USP43-201ENST00000285199 LINC01549A6NIU2 74 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 RBX1P62877 108 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 TMEM95Q3KNT9 176 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 IL17RELQ6ZVW7 336 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 GFRA4Q9GZZ7 299 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 NEU4Q8WWR8 484 aaPredicted RBP12.48□□□□□ -0.41
USP43-201ENST00000285199 A0A087WWL8 130 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 IGHV3-73A0A0B4J1V6 119 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 NPIPB6E9PJ23 425 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 TEX29Q8N6K0 151 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 IGLV3-9A0A075B6K5 115 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 ZNF883P0CG24 379 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 FXYD2P54710 66 aa12.48□□□□□ -0.41
USP43-201ENST00000285199 KLF5Q13887 457 aaPredicted RBP12.48□□□□□ -0.41
USP43-201ENST00000285199 A8MWV9 139 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 WFDC2Q14508 124 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 ZNF833PQ6ZTB9 187 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 DDB2Q92466 427 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 MRAP2Q96G30 205 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 A0A0G2JNJ9 132 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 IGHG3P01860 377 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 LOXP28300 417 aaPredicted RBP12.47□□□□□ -0.41
USP43-201ENST00000285199 C5orf64Q2M2E5 130 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 PRR25Q96S07 402 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 Q9UFV3 132 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 LTAP01374 205 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 RNASE1P07998 156 aaKnown RBP12.47□□□□□ -0.41
USP43-201ENST00000285199 CT83Q5H943 113 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 CLEC2AQ6UVW9 174 aa12.47□□□□□ -0.41
USP43-201ENST00000285199 ANKRD11Q6UB99 2663 aaPredicted RBP12.46□□□□□ -0.41
USP43-201ENST00000285199 EGR2P11161 476 aaPredicted RBP12.46□□□□□ -0.41
USP43-201ENST00000285199 SPATA12Q7Z6I5 190 aa12.46□□□□□ -0.41
USP43-201ENST00000285199 SCRT2Q9NQ03 307 aa12.46□□□□□ -0.41
USP43-201ENST00000285199 GAGE12HA6NDE8 117 aa12.46□□□□□ -0.41
USP43-201ENST00000285199 SYT8Q8NBV8 401 aa12.46□□□□□ -0.41
USP43-201ENST00000285199 CHD9Q3L8U1 2897 aa12.46□□□□□ -0.42
USP43-201ENST00000285199 SLC25A16P16260 332 aa12.46□□□□□ -0.42
USP43-201ENST00000285199 CTRLP40313 264 aa12.46□□□□□ -0.42
USP43-201ENST00000285199 GEMIN7Q9H840 131 aaKnown RBP12.46□□□□□ -0.42
USP43-201ENST00000285199 WIPF2Q8TF74 440 aaPredicted RBP12.45□□□□□ -0.42
USP43-201ENST00000285199 WDFY4Q6ZS81 3184 aa12.45□□□□□ -0.42
USP43-201ENST00000285199 NUP210LQ5VU65 1888 aa12.45□□□□□ -0.42
USP43-201ENST00000285199 G3V318 75 aa12.45□□□□□ -0.42
USP43-201ENST00000285199 KLRB1Q12918 225 aa12.45□□□□□ -0.42
USP43-201ENST00000285199 LGALS9BQ3B8N2 356 aa12.45□□□□□ -0.42
USP43-201ENST00000285199 LGALS9CQ6DKI2 356 aa12.45□□□□□ -0.42
USP43-201ENST00000285199 WT1P19544 449 aaPredicted RBP12.44□□□□□ -0.42
USP43-201ENST00000285199 ID1P41134 155 aa12.44□□□□□ -0.42
USP43-201ENST00000285199 RAB9AP51151 201 aa12.44□□□□□ -0.42
USP43-201ENST00000285199 MEIG1Q5JSS6 88 aa12.44□□□□□ -0.42
USP43-201ENST00000285199 DTX2Q86UW9 622 aa12.44□□□□□ -0.42
USP43-201ENST00000285199 MBD3L4A6NDZ8 208 aaPredicted RBP12.44□□□□□ -0.42
USP43-201ENST00000285199 MBD3L3A6NE82 208 aaPredicted RBP12.44□□□□□ -0.42
USP43-201ENST00000285199 MBD3L5A6NJ08 208 aaPredicted RBP12.44□□□□□ -0.42
USP43-201ENST00000285199 POU2AF1Q16633 256 aa12.44□□□□□ -0.42
USP43-201ENST00000285199 MBD3L2Q8NHZ7 208 aaPredicted RBP12.44□□□□□ -0.42
USP43-201ENST00000285199 TSPAN13O95857 204 aa12.44□□□□□ -0.42
USP43-201ENST00000285199 IGLV1-44P01699 117 aa12.44□□□□□ -0.42
USP43-201ENST00000285199 TMEM155Q4W5P6 130 aa12.44□□□□□ -0.42
USP43-201ENST00000285199 CTSZQ9UBR2 303 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms