RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TMEM18Q96B42 140 aa7.18□□□□□ -1.26
SSR3-201ENST00000265044 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.17□□□□□ -1.26
SSR3-201ENST00000265044 IZUMO1RA6ND01 250 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 CD5LO43866 347 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 OR1N2Q8NGR9 330 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 TMEM190Q8WZ59 177 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 V9GYV3 84 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 APCP25054 2843 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 SCGB1D1O95968 90 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 LGALS1P09382 135 aaKnown RBP7.17□□□□□ -1.26
SSR3-201ENST00000265044 SRIP30626 198 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 FOXA3P55318 350 aaPredicted RBP7.17□□□□□ -1.26
SSR3-201ENST00000265044 S100A12P80511 92 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 TCTEX1D4Q5JR98 221 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 IGHV4OR15-8A0A075B7B6 117 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 A0A087WW49 117 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 RNASE4P34096 147 aaKnown RBP7.17□□□□□ -1.26
SSR3-201ENST00000265044 ZNF138P52744 262 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 SLURP1P55000 103 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 HBBP68871 147 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 RNASEKQ6P5S7 137 aaKnown RBP7.17□□□□□ -1.26
SSR3-201ENST00000265044 SMPXQ9UHP9 88 aa7.17□□□□□ -1.26
SSR3-201ENST00000265044 A0A1B0GUT8 65 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 LINC01619G3V211 115 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 TMEM75Q8N9X5 138 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 NUP35Q8NFH5 326 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 ZFAND3Q9H8U3 227 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 NIT2Q9NQR4 276 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 UBR5O95071 2799 aaPredicted RBP7.16□□□□□ -1.26
SSR3-201ENST00000265044 FBLL1A6NHQ2 334 aaKnown RBP7.16□□□□□ -1.26
SSR3-201ENST00000265044 H0Y8G0 127 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 NDUFS6O75380 124 aaKnown RBP7.16□□□□□ -1.26
SSR3-201ENST00000265044 ZC2HC1AQ96GY0 325 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 UBE2E2Q96LR5 201 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 F6UB75 175 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 FOLR2P14207 255 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 PRR25Q96S07 402 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 C12orf57Q99622 126 aa7.16□□□□□ -1.26
SSR3-201ENST00000265044 A0A096LNT2 108 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 LOC105371267A0A1B0GV96 52 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 OVOL1O14753 267 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 SH2D1AO60880 128 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 AMTP48728 403 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 DEFB1P60022 68 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 ZNF702PQ9H963 129 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 PRAC2D3DTV9 90 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 LTAP01374 205 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 PSMB8P28062 276 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 RPS20P60866 119 aaKnown RBP7.15□□□□□ -1.26
SSR3-201ENST00000265044 FER1L6-AS1Q8NA97 138 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 PRSS3P2Q8NHM4 247 aa7.15□□□□□ -1.26
SSR3-201ENST00000265044 TRAV9-1A0A075B6T8 112 aa7.15□□□□□ -1.27
SSR3-201ENST00000265044 C16orf54Q6UWD8 224 aa7.15□□□□□ -1.27
SSR3-201ENST00000265044 Q6ZSV7 163 aa7.15□□□□□ -1.27
SSR3-201ENST00000265044 IGF2BP2-AS1Q96M15 143 aa7.15□□□□□ -1.27
SSR3-201ENST00000265044 ATP6V0BQ99437 205 aa7.15□□□□□ -1.27
SSR3-201ENST00000265044 RNF114Q9Y508 228 aa7.15□□□□□ -1.27
SSR3-201ENST00000265044 IGHV3OR16-12A0A075B7B8 117 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 SMIM17P0DL12 118 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 SRSF2Q01130 221 aaKnown RBP7.14□□□□□ -1.27
SSR3-201ENST00000265044 FAM159AQ6UWV7 190 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 INAFM1C9JVW0 142 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 F5H697 171 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 LY6G6DO95868 133 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 IGLV1-40P01703 118 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 SMIM12Q96EX1 92 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 PACRGQ96M98 296 aaPredicted RBP7.14□□□□□ -1.27
SSR3-201ENST00000265044 AGPAT4-IT1Q9H0P7 198 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 PRDM13Q9H4Q3 707 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 PHLDA3Q9Y5J5 127 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 M0R381 172 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 SAP30O75446 220 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 KRTDAPP60985 99 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 GFI1BQ5VTD9 330 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 SAMD13Q5VXD3 122 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 GPHB5Q86YW7 130 aa7.14□□□□□ -1.27
SSR3-201ENST00000265044 TEP1Q99973 2627 aaKnown RBP7.13□□□□□ -1.27
SSR3-201ENST00000265044 LOC389332A0A1B0GUA5 103 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 TMEM86BQ8N661 226 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 LINC00477Q96M19 166 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 KLF12Q9Y4X4 402 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 SMAD5-AS1Q9Y6J3 95 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 TCF21O43680 179 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 CDX1P47902 265 aaPredicted RBP7.13□□□□□ -1.27
SSR3-201ENST00000265044 FAM231DQ6ZW35 169 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 FA2HQ7L5A8 372 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 IGLV2-8P01709 118 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 TSPOP30536 169 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 DEFB131AP59861 70 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 ACTL10Q5JWF8 245 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 LYZL1Q6UWQ5 148 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 GNB1LQ9BYB4 327 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 NACAE9PAV3 2078 aa7.13□□□□□ -1.27
SSR3-201ENST00000265044 TMEM89A2RUT3 159 aa7.12□□□□□ -1.27
SSR3-201ENST00000265044 CKS2P33552 79 aa7.12□□□□□ -1.27
SSR3-201ENST00000265044 MYCNOSP40205 109 aa7.12□□□□□ -1.27
SSR3-201ENST00000265044 OR8A1Q8NGG7 326 aa7.12□□□□□ -1.27
SSR3-201ENST00000265044 TRAV21A0A0B4J279 112 aa7.12□□□□□ -1.27
SSR3-201ENST00000265044 MGPP08493 103 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms