RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 RITA1Q96K30 269 aa14.89□□□□□ -0.03
COL4A3BP-201ENST00000261415 NDFIP1Q9BT67 221 aa14.89□□□□□ -0.03
COL4A3BP-201ENST00000261415 FAM90A9PA6NNJ1 464 aa14.89□□□□□ -0.03
COL4A3BP-201ENST00000261415 H0Y8G0 127 aa14.89□□□□□ -0.03
COL4A3BP-201ENST00000261415 SAA1P0DJI8 122 aaPredicted RBP14.89□□□□□ -0.03
COL4A3BP-201ENST00000261415 GPR82Q96P67 336 aa14.89□□□□□ -0.03
COL4A3BP-201ENST00000261415 CYSLTR1Q9Y271 337 aa14.89□□□□□ -0.03
COL4A3BP-201ENST00000261415 PRSS46E5RG02 174 aa14.88□□□□□ -0.03
COL4A3BP-201ENST00000261415 IGLV2-23P01705 113 aa14.88□□□□□ -0.03
COL4A3BP-201ENST00000261415 SHISA2Q6UWI4 295 aa14.88□□□□□ -0.03
COL4A3BP-201ENST00000261415 TTC9CQ8N5M4 171 aa14.88□□□□□ -0.03
COL4A3BP-201ENST00000261415 ACANP16112 2415 aa14.87□□□□□ -0.03
COL4A3BP-201ENST00000261415 TRAV3A0A0B4J244 114 aa14.87□□□□□ -0.03
COL4A3BP-201ENST00000261415 TAS2R45P59539 299 aa14.87□□□□□ -0.03
COL4A3BP-201ENST00000261415 CD24P25063 80 aa14.87□□□□□ -0.03
COL4A3BP-201ENST00000261415 FOXA3P55318 350 aaPredicted RBP14.87□□□□□ -0.03
COL4A3BP-201ENST00000261415 GTSF1Q8WW33 167 aa14.87□□□□□ -0.03
COL4A3BP-201ENST00000261415 MCRIP2Q9BUT9 160 aaKnown RBP14.87□□□□□ -0.03
COL4A3BP-201ENST00000261415 ERG28Q9UKR5 140 aa14.87□□□□□ -0.03
COL4A3BP-201ENST00000261415 PSG8Q9UQ74 426 aa14.87□□□□□ -0.03
COL4A3BP-201ENST00000261415 FLNBO75369 2602 aaKnown RBP14.87□□□□□ -0.03
COL4A3BP-201ENST00000261415 FAM110AQ9BQ89 295 aa14.86□□□□□ -0.03
COL4A3BP-201ENST00000261415 OTOGQ6ZRI0 2925 aa14.86□□□□□ -0.03
COL4A3BP-201ENST00000261415 GGTLC3B5MD39 225 aa14.86□□□□□ -0.03
COL4A3BP-201ENST00000261415 CNTFRP26992 372 aa14.86□□□□□ -0.03
COL4A3BP-201ENST00000261415 FCGR2BP31994 310 aaPredicted RBP14.86□□□□□ -0.03
COL4A3BP-201ENST00000261415 MIR17HGQ75NE6 70 aa14.86□□□□□ -0.03
COL4A3BP-201ENST00000261415 HEYLQ9NQ87 328 aaPredicted RBP14.86□□□□□ -0.03
COL4A3BP-201ENST00000261415 MOSP00540 346 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 SSBP2P81877 361 aaPredicted RBP14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 RNF5Q99942 180 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 FBLL1A6NHQ2 334 aaKnown RBP14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 C15orf61A6NNL5 157 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 UPK2O00526 184 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 CSN1S1P47710 185 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 PRR20EP86478 221 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 PRR20CP86479 221 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 PRR20DP86480 221 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 PRR20BP86481 221 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 PRR20AP86496 221 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 GAGE5Q13069 117 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 GAGE6Q13070 117 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 HES1Q14469 280 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 VMA21Q3ZAQ7 101 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 ZNF747Q9BV97 191 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 C19orf24Q9BVV8 132 aa14.85□□□□□ -0.03
COL4A3BP-201ENST00000261415 WFDC2Q14508 124 aa14.84□□□□□ -0.03
COL4A3BP-201ENST00000261415 C8orf86Q6ZUL3 223 aa14.84□□□□□ -0.03
COL4A3BP-201ENST00000261415 SS18L2Q9UHA2 77 aa14.84□□□□□ -0.03
COL4A3BP-201ENST00000261415 FSHBP01225 129 aa14.83□□□□□ -0.03
COL4A3BP-201ENST00000261415 VDAC2P45880 294 aaPredicted RBP14.83□□□□□ -0.03
COL4A3BP-201ENST00000261415 LCNL1Q6ZST4 164 aa14.83□□□□□ -0.03
COL4A3BP-201ENST00000261415 ZNF502Q8TBZ5 544 aa14.83□□□□□ -0.03
COL4A3BP-201ENST00000261415 TPSG1Q9NRR2 321 aa14.83□□□□□ -0.03
COL4A3BP-201ENST00000261415 TMEM14BQ9NUH8 114 aa14.83□□□□□ -0.03
COL4A3BP-201ENST00000261415 MXRA5Q9NR99 2828 aa14.83□□□□□ -0.04
COL4A3BP-201ENST00000261415 EBI3Q14213 229 aa14.83□□□□□ -0.04
COL4A3BP-201ENST00000261415 TMEM167AQ8TBQ9 72 aa14.83□□□□□ -0.04
COL4A3BP-201ENST00000261415 FOXA2Q9Y261 457 aaPredicted RBP14.83□□□□□ -0.04
COL4A3BP-201ENST00000261415 KRTAP1-1Q07627 177 aa14.82□□□□□ -0.04
COL4A3BP-201ENST00000261415 PRNDQ9UKY0 176 aa14.82□□□□□ -0.04
COL4A3BP-201ENST00000261415 SPINK8P0C7L1 97 aa14.82□□□□□ -0.04
COL4A3BP-201ENST00000261415 Q8N6K4 173 aa14.82□□□□□ -0.04
COL4A3BP-201ENST00000261415 NAV3Q8IVL0 2385 aa14.82□□□□□ -0.04
COL4A3BP-201ENST00000261415 CRYGBP07316 175 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 FAM106CPP0CH98 169 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 MYOD1P15172 320 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 ACTL6BO94805 426 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 MRGPRG-AS1Q2M3A8 158 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 LGALS9BQ3B8N2 356 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 ETDBQ3ZM63 59 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 PSMG4Q5JS54 123 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 LGALS9CQ6DKI2 356 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 TMUB1Q9BVT8 246 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 AP5S1Q9NUS5 200 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 SIGLEC9Q9Y336 463 aa14.81□□□□□ -0.04
COL4A3BP-201ENST00000261415 TRBV7-9A0A0J9YWB2 115 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 FNDC10F2Z333 226 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 NBR2O15453 112 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 ATP5G2Q06055 141 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 NPBQ8NG41 125 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 RNF183Q96D59 192 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 FBXL15Q9H469 300 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 A8MWL6 223 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 NDUFA3O95167 84 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 CT83Q5H943 113 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 ZNF503Q96F45 646 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 TCF19Q9Y242 345 aa14.8□□□□□ -0.04
COL4A3BP-201ENST00000261415 SONP18583 2426 aaKnown RBP14.79□□□□□ -0.04
COL4A3BP-201ENST00000261415 HSPE1P61604 102 aaKnown RBP14.79□□□□□ -0.04
COL4A3BP-201ENST00000261415 PPP1R27Q86WC6 154 aa14.79□□□□□ -0.04
COL4A3BP-201ENST00000261415 HIGD1BQ9P298 99 aa14.79□□□□□ -0.04
COL4A3BP-201ENST00000261415 E9PLD3 99 aa14.78□□□□□ -0.04
COL4A3BP-201ENST00000261415 CHEK1O14757 476 aa14.78□□□□□ -0.04
COL4A3BP-201ENST00000261415 SH2D6Q7Z4S9 175 aa14.78□□□□□ -0.04
COL4A3BP-201ENST00000261415 BCL6BQ8N143 479 aaPredicted RBP14.78□□□□□ -0.04
COL4A3BP-201ENST00000261415 HERV-K104P63124 156 aa14.78□□□□□ -0.04
COL4A3BP-201ENST00000261415 PLGLAQ15195 96 aa14.78□□□□□ -0.04
COL4A3BP-201ENST00000261415 GAGE13Q4V321 117 aa14.78□□□□□ -0.04
COL4A3BP-201ENST00000261415 PIFOQ8TCI5 191 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms