RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 GAGE2EQ4V326 116 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 PRR30Q53SZ7 412 aaPredicted RBP5.88□□□□□ -1.47
SSR1-201ENST00000244763 FOXI2Q6ZQN5 318 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 HS3ST6Q96QI5 342 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 GAGE2DQ9UEU5 116 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 IGHV1-24A0A0C4DH33 117 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 IGHV2-5P01817 119 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 C17orf58Q2M2W7 97 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 LHFPL4Q7Z7J7 247 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 AMN1Q8IY45 258 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 TRBV20-1A0A075B6N2 111 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 TRAV8-1A0A0A6YYK1 113 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 DKK1O94907 266 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 MRPL52Q86TS9 123 aaKnown RBP5.88□□□□□ -1.47
SSR1-201ENST00000244763 HIST1H2BLQ99880 126 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 GSN-AS1Q9NRJ2 163 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 ROS1P08922 2347 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 GAGE12JA6NER3 117 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 GAGE1Q13065 139 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 GAGE4Q13068 117 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 GAGE5Q13069 117 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 ZNF114Q8NC26 417 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 CYTL1Q9NRR1 136 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 PKDREJQ9NTG1 2253 aa5.88□□□□□ -1.47
SSR1-201ENST00000244763 TRBV19A0A075B6N1 114 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 IGHV7-4-1A0A0J9YVY3 117 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 MMP23AO75900 390 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 HERVK_113P63121 156 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 GUSBP1Q15486 140 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 MRPL53Q96EL3 112 aaKnown RBP5.87□□□□□ -1.47
SSR1-201ENST00000244763 K7EM74 188 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 IGHV2-70P01814 119 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 LOXP28300 417 aaPredicted RBP5.87□□□□□ -1.47
SSR1-201ENST00000244763 PAX9P55771 341 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 SOCS3O14543 225 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 ZNF134P52741 427 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 IGFL2Q6UWQ7 119 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 MEGF9Q9H1U4 602 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 GAGE12BA1L429 117 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.87□□□□□ -1.47
SSR1-201ENST00000244763 CRLF1O75462 422 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 GAGE7O76087 117 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 GAGE12FP0CL80 117 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 GAGE12GP0CL81 117 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 GAGE12IP0CL82 117 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 ZNRF2Q8NHG8 242 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 CREBBPQ92793 2442 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 LHBP01229 141 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 C22orf46C9J442 243 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 NPC2P61916 151 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 ZC2HC1BQ5TFG8 222 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 IL17DQ8TAD2 202 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 H3BRN7 92 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 FOXE3Q13461 319 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 ZFAND6Q6FIF0 208 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 BOD1L2Q8IYS8 172 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 Q8N8P6 123 aa5.87□□□□□ -1.47
SSR1-201ENST00000244763 NDUFS6O75380 124 aaKnown RBP5.86□□□□□ -1.47
SSR1-201ENST00000244763 TRAV13-2A0A0B4J235 113 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 KLF5Q13887 457 aaPredicted RBP5.86□□□□□ -1.47
SSR1-201ENST00000244763 HLA-DRB4P13762 266 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 POU2AF1Q16633 256 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 PRR25Q96S07 402 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 SLX1AQ9BQ83 275 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 HLA-DRB4X5D2U9 266 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 ANGP03950 147 aaKnown RBP5.86□□□□□ -1.47
SSR1-201ENST00000244763 FAM104BQ5XKR9 115 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 PRSS33Q8NF86 280 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 ANAPC13Q9BS18 74 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 LY6G6EA0A0G2JKS1 128 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 CCL18P55774 89 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 PROK2Q9HC23 129 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 TP53TG1Q9Y2A0 90 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 U3KQA8 63 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 G3V318 75 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 C20orf78Q9BR46 151 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 IGF2BP2-AS1Q96M15 143 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 DSCR8Q96T75 97 aa5.86□□□□□ -1.47
SSR1-201ENST00000244763 RBAKDNA6NC62 111 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 TAL2Q16559 108 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 Q6ZR03 302 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 HIST3H2BBQ8N257 126 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 UBL5Q9BZL1 73 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 KIF26AQ9ULI4 1882 aaPredicted RBP5.85□□□□□ -1.47
SSR1-201ENST00000244763 Q0VG73 95 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 MAPK1IP1LQ8NDC0 245 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 NOTCH3Q9UM47 2321 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 A0A087WV48 116 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 H3BQ85 93 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 SRSF3P84103 164 aaKnown RBP5.85□□□□□ -1.47
SSR1-201ENST00000244763 MLANAQ16655 118 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 C2orf66Q6UXQ4 117 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 FAM231DQ6ZW35 169 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 ZNF493Q6ZR52 646 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 OR11H6Q8NGC7 330 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 CUL9Q8IWT3 2517 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 DKK4Q9UBT3 224 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 SDHAF1A6NFY7 115 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 SPART-AS1P0CW21 52 aa5.85□□□□□ -1.47
SSR1-201ENST00000244763 A0A0G2JRQ6 117 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms