RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CSNK1G2-AS1Q8NCQ2 148 aa9.86□□□□□ -0.83
DDX39A-201ENST00000242776 SLC50A1Q9BRV3 221 aa9.86□□□□□ -0.83
DDX39A-201ENST00000242776 ZNF253O75346 499 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 EIF3GO75821 320 aaKnown RBP eCLIP9.85□□□□□ -0.83
DDX39A-201ENST00000242776 OR10J4P0C629 311 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 GCHFRP30047 84 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 ID1P41134 155 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 PPT1P50897 306 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 FGF8P55075 233 aaPredicted RBP9.85□□□□□ -0.83
DDX39A-201ENST00000242776 PSMG4Q5JS54 123 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 C1orf134Q5TEV5 83 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 Q6ZR54 194 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 FXYD5Q96DB9 178 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 IGHV3OR16-12A0A075B7B8 117 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 NBEAP1P0C6P0 100 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 PSMB3P49720 205 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 FXYD7P58549 80 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 RAB14P61106 215 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 PSG9Q00887 426 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 BLNKQ8WV28 456 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 ZNF503Q96F45 646 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 C16orf92Q96LL3 132 aa9.85□□□□□ -0.83
DDX39A-201ENST00000242776 TRBV19A0A075B6N1 114 aa9.84□□□□□ -0.83
DDX39A-201ENST00000242776 TRAV1-1A0A0B4J248 108 aa9.84□□□□□ -0.83
DDX39A-201ENST00000242776 ISLRO14498 428 aa9.84□□□□□ -0.83
DDX39A-201ENST00000242776 SNRPD3P62318 126 aaKnown RBP9.84□□□□□ -0.83
DDX39A-201ENST00000242776 TNP2Q05952 138 aa9.84□□□□□ -0.83
DDX39A-201ENST00000242776 DCANP1Q8TF63 244 aa9.84□□□□□ -0.83
DDX39A-201ENST00000242776 AAMDCQ9H7C9 122 aa9.84□□□□□ -0.83
DDX39A-201ENST00000242776 ZNF586Q9NXT0 402 aa9.84□□□□□ -0.83
DDX39A-201ENST00000242776 A0A1B0GV50 99 aa9.83□□□□□ -0.84
DDX39A-201ENST00000242776 H3BQ15 152 aa9.83□□□□□ -0.84
DDX39A-201ENST00000242776 IFNA1P01562 189 aa9.83□□□□□ -0.84
DDX39A-201ENST00000242776 IGKV3-20P01619 116 aa9.83□□□□□ -0.84
DDX39A-201ENST00000242776 LYPD1Q8N2G4 141 aa9.83□□□□□ -0.84
DDX39A-201ENST00000242776 SUN5Q8TC36 379 aa9.83□□□□□ -0.84
DDX39A-201ENST00000242776 SOCS3O14543 225 aa9.82□□□□□ -0.84
DDX39A-201ENST00000242776 SNRPCP09234 159 aaKnown RBP9.82□□□□□ -0.84
DDX39A-201ENST00000242776 IFITM2Q01629 132 aa9.82□□□□□ -0.84
DDX39A-201ENST00000242776 MANBALQ9NQG1 85 aa9.82□□□□□ -0.84
DDX39A-201ENST00000242776 ZNF331Q9NQX6 463 aaPredicted RBP9.82□□□□□ -0.84
DDX39A-201ENST00000242776 ARL2-SNX15V9GYD0 113 aa9.82□□□□□ -0.84
DDX39A-201ENST00000242776 H3BTX0 84 aa9.81□□□□□ -0.84
DDX39A-201ENST00000242776 SPART-AS1P0CW21 52 aa9.81□□□□□ -0.84
DDX39A-201ENST00000242776 C17orf77Q96MU5 243 aa9.81□□□□□ -0.84
DDX39A-201ENST00000242776 TMPRSS5Q9H3S3 457 aa9.81□□□□□ -0.84
DDX39A-201ENST00000242776 PRELID1Q9Y255 219 aa9.81□□□□□ -0.84
DDX39A-201ENST00000242776 LRP1BQ9NZR2 4599 aa9.8□□□□□ -0.84
DDX39A-201ENST00000242776 A0A1W2PRE2 83 aa9.8□□□□□ -0.84
DDX39A-201ENST00000242776 SLC17A3O00476 420 aa9.8□□□□□ -0.84
DDX39A-201ENST00000242776 TAGLN2P37802 199 aaKnown RBP9.8□□□□□ -0.84
DDX39A-201ENST00000242776 DEFB1P60022 68 aa9.8□□□□□ -0.84
DDX39A-201ENST00000242776 LYPD6BQ8NI32 183 aa9.8□□□□□ -0.84
DDX39A-201ENST00000242776 MRPL53Q96EL3 112 aaKnown RBP9.8□□□□□ -0.84
DDX39A-201ENST00000242776 NKX6-2Q9C056 277 aaPredicted RBP9.8□□□□□ -0.84
DDX39A-201ENST00000242776 Q9H3A6 140 aa9.8□□□□□ -0.84
DDX39A-201ENST00000242776 OTORQ9NRC9 128 aa9.8□□□□□ -0.84
DDX39A-201ENST00000242776 RGS13O14921 159 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 NDUFB4O95168 129 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 NMBP08949 121 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 UBE2G2P60604 165 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 RANP62826 216 aaKnown RBP9.79□□□□□ -0.84
DDX39A-201ENST00000242776 ZNF738Q8NE65 137 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 LINC00052Q96N35 136 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 SCRT2Q9NQ03 307 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 GNG13Q9P2W3 67 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 TRAV8-2A0A0B4J237 113 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 FAM74A7A6NL05 159 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 CDK2AP2O75956 126 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 CSN1S1P47710 185 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 NUTF2P61970 127 aaKnown RBP9.79□□□□□ -0.84
DDX39A-201ENST00000242776 ICAM4Q14773 271 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 PSG3Q16557 428 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 CLLU1Q5K131 121 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 FAM222AQ5U5X8 452 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 TMEM88Q6PEY1 159 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 CMTM2Q8TAZ6 248 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 RXFP4Q8TDU9 374 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 TXNDC17Q9BRA2 123 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 NIPSNAP3BQ9BS92 247 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 C1QTNF4Q9BXJ3 329 aa9.79□□□□□ -0.84
DDX39A-201ENST00000242776 PGPA6NDG6 321 aa9.78□□□□□ -0.84
DDX39A-201ENST00000242776 PAGE4O60829 102 aa9.78□□□□□ -0.84
DDX39A-201ENST00000242776 CST9LP1Q5W188 147 aa9.78□□□□□ -0.84
DDX39A-201ENST00000242776 EXOC3-AS1Q8N2X6 119 aa9.78□□□□□ -0.84
DDX39A-201ENST00000242776 RNF182Q8N6D2 247 aa9.78□□□□□ -0.84
DDX39A-201ENST00000242776 TCEAL7Q9BRU2 100 aa9.78□□□□□ -0.84
DDX39A-201ENST00000242776 H3BMM0 161 aa9.77□□□□□ -0.85
DDX39A-201ENST00000242776 SLC25A5P05141 298 aaKnown RBP9.77□□□□□ -0.85
DDX39A-201ENST00000242776 BCL2P10415 239 aa9.77□□□□□ -0.85
DDX39A-201ENST00000242776 SUMO1P63165 101 aaKnown RBP9.77□□□□□ -0.85
DDX39A-201ENST00000242776 CCL20P78556 96 aa9.77□□□□□ -0.85
DDX39A-201ENST00000242776 GDF5OSQ5U4N7 250 aa9.77□□□□□ -0.85
DDX39A-201ENST00000242776 IGFL4Q6B9Z1 124 aa9.77□□□□□ -0.85
DDX39A-201ENST00000242776 ARL6IP6Q8N6S5 226 aa9.77□□□□□ -0.85
DDX39A-201ENST00000242776 C5orf17Q8NAS9 161 aa9.77□□□□□ -0.85
DDX39A-201ENST00000242776 PCNPQ8WW12 178 aaKnown RBP9.77□□□□□ -0.85
DDX39A-201ENST00000242776 DKK2Q9UBU2 259 aa9.77□□□□□ -0.85
DDX39A-201ENST00000242776 YTHDF2Q9Y5A9 579 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms