RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MRPL27Q9P0M9 148 aaKnown RBP10.57□□□□□ -0.72
COL1A1-201ENST00000225964 CRLF1O75462 422 aa10.57□□□□□ -0.72
COL1A1-201ENST00000225964 RNASE13Q5GAN3 156 aaKnown RBP10.57□□□□□ -0.72
COL1A1-201ENST00000225964 DSCR8Q96T75 97 aa10.57□□□□□ -0.72
COL1A1-201ENST00000225964 CCL24O00175 119 aa10.57□□□□□ -0.72
COL1A1-201ENST00000225964 SPINK8P0C7L1 97 aa10.57□□□□□ -0.72
COL1A1-201ENST00000225964 IGFL3Q6UXB1 125 aa10.57□□□□□ -0.72
COL1A1-201ENST00000225964 IGHV1-24A0A0C4DH33 117 aa10.57□□□□□ -0.72
COL1A1-201ENST00000225964 IGHV7-4-1A0A0J9YVY3 117 aa10.57□□□□□ -0.72
COL1A1-201ENST00000225964 Q8N8P6 123 aa10.57□□□□□ -0.72
COL1A1-201ENST00000225964 SMIM2Q9BVW6 85 aa10.57□□□□□ -0.72
COL1A1-201ENST00000225964 DEFB112Q30KQ8 113 aa10.56□□□□□ -0.72
COL1A1-201ENST00000225964 TPSG1Q9NRR2 321 aa10.56□□□□□ -0.72
COL1A1-201ENST00000225964 C2orf66Q6UXQ4 117 aa10.56□□□□□ -0.72
COL1A1-201ENST00000225964 Q6ZRM9 215 aa10.56□□□□□ -0.72
COL1A1-201ENST00000225964 C1orf194Q5T5A4 169 aa10.56□□□□□ -0.72
COL1A1-201ENST00000225964 KMT2EQ8IZD2 1858 aa10.56□□□□□ -0.72
COL1A1-201ENST00000225964 THSD7BQ9C0I4 1608 aa10.56□□□□□ -0.72
COL1A1-201ENST00000225964 TRBV19A0A075B6N1 114 aa10.56□□□□□ -0.72
COL1A1-201ENST00000225964 LOXP28300 417 aaPredicted RBP10.56□□□□□ -0.72
COL1A1-201ENST00000225964 Q6ZS49 121 aa10.56□□□□□ -0.72
COL1A1-201ENST00000225964 A0A1B0GUS0 222 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 hADV29S1A0JD25 119 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 SDHAF1A6NFY7 115 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 H3BRN7 92 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 PTPRDP23468 1912 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 CACNA1IQ9P0X4 2223 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 LRRK1Q38SD2 2015 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 INAFM2P0DMQ5 153 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 C9orf66Q5T8R8 295 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 DEFB136Q30KP8 78 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 Q6ZR03 302 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 PLXNA3P51805 1871 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 IGHV4-59P01825 116 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 XCL1P47992 114 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 MPV17L2Q567V2 206 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 ZNF492Q9P255 531 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 PRSS33Q8NF86 280 aa10.55□□□□□ -0.72
COL1A1-201ENST00000225964 DEFB113Q30KQ7 82 aa10.54□□□□□ -0.72
COL1A1-201ENST00000225964 WDR81Q562E7 1941 aa10.54□□□□□ -0.72
COL1A1-201ENST00000225964 MRPL51Q4U2R6 128 aaKnown RBP10.54□□□□□ -0.72
COL1A1-201ENST00000225964 VPREB3Q9UKI3 123 aa10.54□□□□□ -0.72
COL1A1-201ENST00000225964 HAMPP81172 84 aa10.54□□□□□ -0.72
COL1A1-201ENST00000225964 ELANEP08246 267 aa10.54□□□□□ -0.72
COL1A1-201ENST00000225964 ADAMTSL5Q6ZMM2 481 aa10.53□□□□□ -0.72
COL1A1-201ENST00000225964 VWA8A3KMH1 1905 aa10.53□□□□□ -0.72
COL1A1-201ENST00000225964 COLCA2A8K830 154 aa10.53□□□□□ -0.72
COL1A1-201ENST00000225964 KIAA1671Q9BY89 1806 aa10.53□□□□□ -0.72
COL1A1-201ENST00000225964 TRAV12-1A0A0B4J245 112 aa10.53□□□□□ -0.72
COL1A1-201ENST00000225964 DIAPH2-AS1Q14236 149 aa10.53□□□□□ -0.72
COL1A1-201ENST00000225964 MORN5Q5VZ52 161 aa10.53□□□□□ -0.72
COL1A1-201ENST00000225964 FAM104BQ5XKR9 115 aa10.53□□□□□ -0.72
COL1A1-201ENST00000225964 FRMPD3Q5JV73 1810 aa10.52□□□□□ -0.72
COL1A1-201ENST00000225964 IGLV3-9A0A075B6K5 115 aa10.52□□□□□ -0.72
COL1A1-201ENST00000225964 IGKV1-6A0A0C4DH72 117 aa10.52□□□□□ -0.73
COL1A1-201ENST00000225964 LY6G6EA0A0G2JKS1 128 aa10.52□□□□□ -0.73
COL1A1-201ENST00000225964 SLAQ13239 276 aa10.52□□□□□ -0.73
COL1A1-201ENST00000225964 RHOHQ15669 191 aa10.52□□□□□ -0.73
COL1A1-201ENST00000225964 WDR86Q86TI4 376 aa10.52□□□□□ -0.73
COL1A1-201ENST00000225964 U3KQA8 63 aa10.52□□□□□ -0.73
COL1A1-201ENST00000225964 U3KQE9 123 aa10.52□□□□□ -0.73
COL1A1-201ENST00000225964 AHCTF1Q8WYP5 2266 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 HERVK_113P63121 156 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 MRPL53Q96EL3 112 aaKnown RBP10.51□□□□□ -0.73
COL1A1-201ENST00000225964 IGHV2-5P01817 119 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 APRG1Q8IVJ8 170 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 PLA2G2CQ5R387 149 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 UBL5Q9BZL1 73 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 MYO7BQ6PIF6 2116 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 IGHV4-4A0A075B6R2 117 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 SLURP1P55000 103 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 PLXND1Q9Y4D7 1925 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 LMO1P25800 156 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 FOXI2Q6ZQN5 318 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
COL1A1-201ENST00000225964 SIP14410 1827 aa10.5□□□□□ -0.73
COL1A1-201ENST00000225964 GTSF1LQ9H1H1 148 aa10.5□□□□□ -0.73
COL1A1-201ENST00000225964 CACNA1BQ00975 2339 aa10.5□□□□□ -0.73
COL1A1-201ENST00000225964 ZNF503-AS2A6NEH8 195 aa10.5□□□□□ -0.73
COL1A1-201ENST00000225964 CYYR1Q96J86 154 aa10.5□□□□□ -0.73
COL1A1-201ENST00000225964 PHF3Q92576 2039 aaKnown RBP10.5□□□□□ -0.73
COL1A1-201ENST00000225964 TEX48A0A1B0GUV7 120 aa10.5□□□□□ -0.73
COL1A1-201ENST00000225964 PRR25Q96S07 402 aa10.5□□□□□ -0.73
COL1A1-201ENST00000225964 TSC2P49815 1807 aa10.5□□□□□ -0.73
COL1A1-201ENST00000225964 BUB3O43684 328 aa10.5□□□□□ -0.73
COL1A1-201ENST00000225964 CRYGCP07315 174 aa10.5□□□□□ -0.73
COL1A1-201ENST00000225964 F8W735 103 aaPredicted RBP10.49□□□□□ -0.73
COL1A1-201ENST00000225964 IGHG4P01861 327 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 IGFBPL1Q8WX77 278 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 COX11Q9Y6N1 276 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 TRAV13-2A0A0B4J235 113 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 GP9P14770 177 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 GRNP28799 593 aaKnown RBP10.49□□□□□ -0.73
COL1A1-201ENST00000225964 PROK2Q9HC23 129 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 DIDO1Q9BTC0 2240 aaKnown RBP10.49□□□□□ -0.73
COL1A1-201ENST00000225964 IGHV3-30P01768 117 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 IGHV3-33P01772 117 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 IGHV3-30-3P0DP02 117 aa10.49□□□□□ -0.73
COL1A1-201ENST00000225964 IGHV3-30-5P0DP03 117 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms