RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 SIGLEC9Q9Y336 463 aa9.02□□□□□ -0.97
TP53-226ENST00000620739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.01□□□□□ -0.976e-7■■■■□ 21.6
TP53-226ENST00000620739 IGKV1OR2-108A0A075B7D4 117 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 A0A1W2PRX2 142 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 RNASE2P10153 161 aaKnown RBP9.01□□□□□ -0.97
TP53-226ENST00000620739 RPL15P61313 204 aaKnown RBP9.01□□□□□ -0.97
TP53-226ENST00000620739 VMA21Q3ZAQ7 101 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 FAM90A2PQ658T7 463 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 TTC9CQ8N5M4 171 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 OR2T10Q8NGZ9 312 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 MGST2Q99735 147 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 SLC25A22Q9H936 323 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 TP73-AS1Q9UF72 201 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 WDR83OSQ9Y284 106 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 K7EN84 100 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 CA1P00915 261 aaPredicted RBP9.01□□□□□ -0.97
TP53-226ENST00000620739 RPL7P18124 248 aaKnown RBP9.01□□□□□ -0.97
TP53-226ENST00000620739 ADAMTSL5Q6ZMM2 481 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 PPP1R27Q86WC6 154 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 MAPK1IP1LQ8NDC0 245 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 OR2T6Q8NHC8 308 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 VSTM2AQ8TAG5 236 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 C10orf105Q8TEF2 133 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 AMMECR1Q9Y4X0 333 aaPredicted RBP9.01□□□□□ -0.97
TP53-226ENST00000620739 PXMP4Q9Y6I8 212 aa9.01□□□□□ -0.97
TP53-226ENST00000620739 IGHV3-21A0A0B4J1V1 117 aa9□□□□□ -0.97
TP53-226ENST00000620739 H3BUT2 72 aa9□□□□□ -0.97
TP53-226ENST00000620739 CRYGBP07316 175 aa9□□□□□ -0.97
TP53-226ENST00000620739 COX6B1P14854 86 aa9□□□□□ -0.97
TP53-226ENST00000620739 IGLL1P15814 213 aa9□□□□□ -0.97
TP53-226ENST00000620739 SERF2P84101 59 aa9□□□□□ -0.97
TP53-226ENST00000620739 MIC13Q5XKP0 118 aa9□□□□□ -0.97
TP53-226ENST00000620739 CSPG4Q6UVK1 2322 aa9□□□□□ -0.97
TP53-226ENST00000620739 TRAV9-2A0A087WT02 112 aa9□□□□□ -0.97
TP53-226ENST00000620739 CENPVL3A0A0U1RRI6 287 aa9□□□□□ -0.97
TP53-226ENST00000620739 CT45A10P0DMU9 189 aa9□□□□□ -0.97
TP53-226ENST00000620739 MALP21145 153 aa9□□□□□ -0.97
TP53-226ENST00000620739 PLGLAQ15195 96 aa9□□□□□ -0.97
TP53-226ENST00000620739 CENPVQ7Z7K6 275 aaPredicted RBP9□□□□□ -0.97
TP53-226ENST00000620739 OR10G7Q8NGN6 311 aa9□□□□□ -0.97
TP53-226ENST00000620739 OR10AG1Q8NH19 301 aa9□□□□□ -0.97
TP53-226ENST00000620739 SPANXB1Q9NS25 103 aaPredicted RBP9□□□□□ -0.97
TP53-226ENST00000620739 GNG13Q9P2W3 67 aa9□□□□□ -0.97
TP53-226ENST00000620739 SOX21Q9Y651 276 aaPredicted RBP9□□□□□ -0.97
TP53-226ENST00000620739 SPCS1Q9Y6A9 102 aa9□□□□□ -0.97
TP53-226ENST00000620739 ZFP92A6NM28 416 aa8.99□□□□□ -0.97
TP53-226ENST00000620739 RS1O15537 224 aa8.99□□□□□ -0.97
TP53-226ENST00000620739 GPX1P07203 203 aa8.99□□□□□ -0.97
TP53-226ENST00000620739 FAM120AOSQ5T036 256 aa8.99□□□□□ -0.97
TP53-226ENST00000620739 MRPL54Q6P161 138 aaKnown RBP8.99□□□□□ -0.97
TP53-226ENST00000620739 AJUBAQ96IF1 538 aa8.99□□□□□ -0.97
TP53-226ENST00000620739 MRPL36Q9P0J6 103 aaKnown RBP8.99□□□□□ -0.97
TP53-226ENST00000620739 MFAP2P55001 183 aa8.99□□□□□ -0.97
TP53-226ENST00000620739 FAM19A5Q7Z5A7 132 aaPredicted RBP8.99□□□□□ -0.97
TP53-226ENST00000620739 TEX45Q8NA69 505 aa8.99□□□□□ -0.97
TP53-226ENST00000620739 GGTLC1Q9BX51 225 aa8.99□□□□□ -0.97
TP53-226ENST00000620739 LSM4Q9Y4Z0 139 aaKnown RBP8.99□□□□□ -0.97
TP53-226ENST00000620739 J3QLI3 93 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 ADMP35318 185 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 SAA4P35542 130 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 ERHP84090 104 aaKnown RBP8.98□□□□□ -0.97
TP53-226ENST00000620739 PMCHL1Q16048 86 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 KCNIP4Q6PIL6 250 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 BRD3OSQ6XYD6 125 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 GATAD1Q8WUU5 269 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 SLC39A9Q9NUM3 307 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 LOC107984640A0A0U1RRK4 108 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 NCBP2LA6PVI3 153 aaKnown RBP8.98□□□□□ -0.97
TP53-226ENST00000620739 EIF4EBP3O60516 100 aaPredicted RBP8.98□□□□□ -0.97
TP53-226ENST00000620739 LINC00869P0C866 280 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 C3orf79P0CE67 100 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 PPIFP30405 207 aaKnown RBP8.98□□□□□ -0.97
TP53-226ENST00000620739 RPL11P62913 178 aaKnown RBP8.98□□□□□ -0.97
TP53-226ENST00000620739 C2orf83Q53S99 150 aa8.98□□□□□ -0.97
TP53-226ENST00000620739 RPL27AP46776 148 aaKnown RBP8.97□□□□□ -0.97
TP53-226ENST00000620739 TCTAP57738 103 aa8.97□□□□□ -0.97
TP53-226ENST00000620739 TEPPQ6URK8 271 aa8.97□□□□□ -0.97
TP53-226ENST00000620739 KIR3DL3Q8N743 410 aa8.97□□□□□ -0.97
TP53-226ENST00000620739 CCDC168Q8NDH2 2452 aa8.97□□□□□ -0.97
TP53-226ENST00000620739 OPRK1P41145 380 aa8.97□□□□□ -0.97
TP53-226ENST00000620739 Q6ZUT4 128 aa8.97□□□□□ -0.97
TP53-226ENST00000620739 MMD2Q8IY49 270 aa8.97□□□□□ -0.97
TP53-226ENST00000620739 TMEM126AQ9H061 195 aa8.97□□□□□ -0.97
TP53-226ENST00000620739 TIMM9Q9Y5J7 89 aa8.97□□□□□ -0.97
TP53-226ENST00000620739 TEX22C9J3V5 150 aa8.96□□□□□ -0.97
TP53-226ENST00000620739 H3BRM9 83 aa8.96□□□□□ -0.97
TP53-226ENST00000620739 MOSP00540 346 aa8.96□□□□□ -0.97
TP53-226ENST00000620739 KLF17Q5JT82 389 aaPredicted RBP8.96□□□□□ -0.97
TP53-226ENST00000620739 ZFAND6Q6FIF0 208 aa8.96□□□□□ -0.97
TP53-226ENST00000620739 SPATA12Q7Z6I5 190 aa8.96□□□□□ -0.97
TP53-226ENST00000620739 BAGE3Q86Y29 109 aa8.96□□□□□ -0.97
TP53-226ENST00000620739 BAGE2Q86Y30 109 aa8.96□□□□□ -0.97
TP53-226ENST00000620739 MBD3L1Q8WWY6 194 aa8.96□□□□□ -0.97
TP53-226ENST00000620739 SRSF12Q8WXF0 261 aaKnown RBP8.96□□□□□ -0.97
TP53-226ENST00000620739 SH2D7A6NKC9 451 aaPredicted RBP8.96□□□□□ -0.98
TP53-226ENST00000620739 UBE2E1P51965 193 aa8.96□□□□□ -0.98
TP53-226ENST00000620739 CD69Q07108 199 aa8.96□□□□□ -0.98
TP53-226ENST00000620739 STPG3Q8N7X2 389 aa8.96□□□□□ -0.98
TP53-226ENST00000620739 NPIPB3Q92617 1050 aa8.96□□□□□ -0.98
TP53-226ENST00000620739 SPANXA1Q9NS26 97 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms