RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 OR5C1Q8NGR4 320 aa12.95□□□□□ -0.34
VCX3A-203ENST00000612369 LINC01587Q99440 93 aa12.95□□□□□ -0.34
VCX3A-203ENST00000612369 C20orf144Q9BQM9 153 aa12.95□□□□□ -0.34
VCX3A-203ENST00000612369 NPCDR1Q9BY65 106 aa12.95□□□□□ -0.34
VCX3A-203ENST00000612369 TMEM14CQ9P0S9 112 aa12.95□□□□□ -0.34
VCX3A-203ENST00000612369 PLA2G2EQ9NZK7 142 aa12.94□□□□□ -0.34
VCX3A-203ENST00000612369 H3BTX0 84 aa12.93□□□□□ -0.34
VCX3A-203ENST00000612369 LRRC37A5PQ49AS3 106 aa12.93□□□□□ -0.34
VCX3A-203ENST00000612369 POM121L12Q8N7R1 296 aa12.93□□□□□ -0.34
VCX3A-203ENST00000612369 MRPL53Q96EL3 112 aaKnown RBP12.93□□□□□ -0.34
VCX3A-203ENST00000612369 ZNF586Q9NXT0 402 aa12.93□□□□□ -0.34
VCX3A-203ENST00000612369 OR5AC2Q9NZP5 309 aa12.93□□□□□ -0.34
VCX3A-203ENST00000612369 H0YIZ8 118 aa12.92□□□□□ -0.34
VCX3A-203ENST00000612369 H7BYZ3 331 aa12.92□□□□□ -0.34
VCX3A-203ENST00000612369 HIST1H1EP10412 219 aaKnown RBP12.92□□□□□ -0.34
VCX3A-203ENST00000612369 PDE6HQ13956 83 aa12.92□□□□□ -0.34
VCX3A-203ENST00000612369 ZNF493Q6ZR52 646 aa12.92□□□□□ -0.34
VCX3A-203ENST00000612369 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
VCX3A-203ENST00000612369 ODF3Q96PU9 254 aa12.92□□□□□ -0.34
VCX3A-203ENST00000612369 KCNIP2Q9NS61 270 aa12.92□□□□□ -0.34
VCX3A-203ENST00000612369 TRBV19A0A075B6N1 114 aa12.91□□□□□ -0.34
VCX3A-203ENST00000612369 PRAC2D3DTV9 90 aa12.91□□□□□ -0.34
VCX3A-203ENST00000612369 SSNA1O43805 119 aa12.91□□□□□ -0.34
VCX3A-203ENST00000612369 PRM2P04554 102 aa12.91□□□□□ -0.34
VCX3A-203ENST00000612369 PET100P0DJ07 73 aa12.91□□□□□ -0.34
VCX3A-203ENST00000612369 AZU1P20160 251 aa12.91□□□□□ -0.34
VCX3A-203ENST00000612369 H2BFSP57053 126 aa12.91□□□□□ -0.34
VCX3A-203ENST00000612369 PPP1R1CQ8WVI7 109 aa12.91□□□□□ -0.34
VCX3A-203ENST00000612369 PRELID1Q9Y255 219 aa12.91□□□□□ -0.34
VCX3A-203ENST00000612369 FRAS1Q86XX4 4008 aa12.91□□□□□ -0.34
VCX3A-203ENST00000612369 DNAH6Q9C0G6 4158 aa12.91□□□□□ -0.34
VCX3A-203ENST00000612369 PLAC8L1A1L4L8 177 aa12.9□□□□□ -0.34
VCX3A-203ENST00000612369 NPIPB6E9PJ23 425 aa12.9□□□□□ -0.34
VCX3A-203ENST00000612369 HTN3P15516 51 aa12.9□□□□□ -0.34
VCX3A-203ENST00000612369 THAP6Q8TBB0 222 aa12.9□□□□□ -0.34
VCX3A-203ENST00000612369 WDR61Q9GZS3 305 aaKnown RBP12.9□□□□□ -0.34
VCX3A-203ENST00000612369 TIMM9Q9Y5J7 89 aa12.9□□□□□ -0.34
VCX3A-203ENST00000612369 PRB4P10163 310 aaPredicted RBP12.89□□□□□ -0.35
VCX3A-203ENST00000612369 LEPP41159 167 aa12.89□□□□□ -0.35
VCX3A-203ENST00000612369 CLINT1Q14677 625 aa12.89□□□□□ -0.35
VCX3A-203ENST00000612369 TMEM263Q8WUH6 116 aaKnown RBP12.89□□□□□ -0.35
VCX3A-203ENST00000612369 TIMM8BQ9Y5J9 83 aaPredicted RBP12.89□□□□□ -0.35
VCX3A-203ENST00000612369 DNAH10Q8IVF4 4471 aa12.89□□□□□ -0.35
VCX3A-203ENST00000612369 C17orf112F2Z3M2 114 aa12.88□□□□□ -0.35
VCX3A-203ENST00000612369 MPC2O95563 127 aa12.88□□□□□ -0.35
VCX3A-203ENST00000612369 HTN1P15515 57 aa12.88□□□□□ -0.35
VCX3A-203ENST00000612369 GCSAMLQ5JQS6 135 aa12.88□□□□□ -0.35
VCX3A-203ENST00000612369 GFI1BQ5VTD9 330 aa12.88□□□□□ -0.35
VCX3A-203ENST00000612369 C15orf53Q8NAA6 179 aa12.88□□□□□ -0.35
VCX3A-203ENST00000612369 MRPL32Q9BYC8 188 aaKnown RBP12.88□□□□□ -0.35
VCX3A-203ENST00000612369 NDUFB4O95168 129 aa12.87□□□□□ -0.35
VCX3A-203ENST00000612369 CT45A10P0DMU9 189 aa12.87□□□□□ -0.35
VCX3A-203ENST00000612369 DEFB130BP0DP73 79 aa12.87□□□□□ -0.35
VCX3A-203ENST00000612369 DEFB130AP0DP74 79 aa12.87□□□□□ -0.35
VCX3A-203ENST00000612369 PYYP10082 97 aa12.87□□□□□ -0.35
VCX3A-203ENST00000612369 RNF212Q495C1 297 aa12.87□□□□□ -0.35
VCX3A-203ENST00000612369 TMEM88Q6PEY1 159 aa12.87□□□□□ -0.35
VCX3A-203ENST00000612369 CCDC28AQ8IWP9 274 aa12.87□□□□□ -0.35
VCX3A-203ENST00000612369 RNASE8Q8TDE3 154 aaKnown RBP12.87□□□□□ -0.35
VCX3A-203ENST00000612369 ATP5SQ99766 215 aa12.87□□□□□ -0.35
VCX3A-203ENST00000612369 SLC25A2Q9BXI2 301 aa12.87□□□□□ -0.35
VCX3A-203ENST00000612369 AAMDCQ9H7C9 122 aa12.87□□□□□ -0.35
VCX3A-203ENST00000612369 CBY3A6NI87 242 aa12.86□□□□□ -0.35
VCX3A-203ENST00000612369 ATP5G1P05496 136 aa12.86□□□□□ -0.35
VCX3A-203ENST00000612369 ATP5G3P48201 142 aa12.86□□□□□ -0.35
VCX3A-203ENST00000612369 KIR3DS1Q14943 382 aa12.86□□□□□ -0.35
VCX3A-203ENST00000612369 UBE2DNLQ8IWF7 75 aa12.86□□□□□ -0.35
VCX3A-203ENST00000612369 FAM167A-AS1Q96KT0 104 aa12.86□□□□□ -0.35
VCX3A-203ENST00000612369 LINC00477Q96M19 166 aa12.86□□□□□ -0.35
VCX3A-203ENST00000612369 PARD6GQ9BYG4 376 aaPredicted RBP12.86□□□□□ -0.35
VCX3A-203ENST00000612369 HSPB11Q9Y547 144 aa12.86□□□□□ -0.35
VCX3A-203ENST00000612369 M0R3E3 92 aa12.85□□□□□ -0.35
VCX3A-203ENST00000612369 NBEAP1P0C6P0 100 aa12.85□□□□□ -0.35
VCX3A-203ENST00000612369 FCN2Q15485 313 aa12.85□□□□□ -0.35
VCX3A-203ENST00000612369 MIR17HGQ75NE6 70 aa12.85□□□□□ -0.35
VCX3A-203ENST00000612369 BLNKQ8WV28 456 aa12.85□□□□□ -0.35
VCX3A-203ENST00000612369 OR51M1Q9H341 326 aa12.85□□□□□ -0.35
VCX3A-203ENST00000612369 FUT9Q9Y231 359 aa12.85□□□□□ -0.35
VCX3A-203ENST00000612369 IFNA5P01569 189 aa12.84□□□□□ -0.35
VCX3A-203ENST00000612369 SLC25A5P05141 298 aaKnown RBP12.84□□□□□ -0.35
VCX3A-203ENST00000612369 RPL12P30050 165 aaKnown RBP12.84□□□□□ -0.35
VCX3A-203ENST00000612369 PYGO2Q9BRQ0 406 aa12.84□□□□□ -0.35
VCX3A-203ENST00000612369 TRAV12-3A0A0B4J271 114 aa12.83□□□□□ -0.36
VCX3A-203ENST00000612369 ICAM4Q14773 271 aa12.83□□□□□ -0.36
VCX3A-203ENST00000612369 LGALS9BQ3B8N2 356 aa12.83□□□□□ -0.36
VCX3A-203ENST00000612369 C9orf47Q6ZRZ4 202 aa12.83□□□□□ -0.36
VCX3A-203ENST00000612369 LINC00336Q6ZUF6 198 aa12.83□□□□□ -0.36
VCX3A-203ENST00000612369 EXOC3-AS1Q8N2X6 119 aa12.83□□□□□ -0.36
VCX3A-203ENST00000612369 SCGB1C1Q8TD33 95 aa12.83□□□□□ -0.36
VCX3A-203ENST00000612369 PAXXQ9BUH6 204 aa12.83□□□□□ -0.36
VCX3A-203ENST00000612369 NOP10Q9NPE3 64 aaKnown RBP12.83□□□□□ -0.36
VCX3A-203ENST00000612369 F5H768 121 aa12.82□□□□□ -0.36
VCX3A-203ENST00000612369 J3KRW8 73 aa12.82□□□□□ -0.36
VCX3A-203ENST00000612369 NMBP08949 121 aa12.82□□□□□ -0.36
VCX3A-203ENST00000612369 FAM3BP58499 235 aaPredicted RBP12.82□□□□□ -0.36
VCX3A-203ENST00000612369 RNF141Q8WVD5 230 aa12.82□□□□□ -0.36
VCX3A-203ENST00000612369 FXYD5Q96DB9 178 aa12.82□□□□□ -0.36
VCX3A-203ENST00000612369 FAM19A4Q96LR4 140 aa12.82□□□□□ -0.36
VCX3A-203ENST00000612369 AGPAT4-IT1Q9H0P7 198 aa12.82□□□□□ -0.36
VCX3A-203ENST00000612369 MBD2Q9UBB5 411 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms