RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 NOTCH4Q99466 2003 aa8.88□□□□□ -0.99
SHANK2-219ENST00000606715 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
SHANK2-219ENST00000606715 KLK5Q9Y337 293 aaPredicted RBP8.88□□□□□ -0.99
SHANK2-219ENST00000606715 SPTBN1Q01082 2364 aaKnown RBP8.88□□□□□ -0.99
SHANK2-219ENST00000606715 KLF5Q13887 457 aaPredicted RBP8.87□□□□□ -0.99
SHANK2-219ENST00000606715 DMRTC2Q8IXT2 367 aaPredicted RBP8.87□□□□□ -0.99
SHANK2-219ENST00000606715 VPREB3Q9UKI3 123 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 ERG28Q9UKR5 140 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 TEX48A0A1B0GUV7 120 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 SLAQ13239 276 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 ZNF114Q8NC26 417 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 FANCMQ8IYD8 2048 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 LIME1Q9H400 295 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 CCL24O00175 119 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 CCL18P55774 89 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 DEFB112Q30KQ8 113 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 LY6G5BQ8NDX9 201 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 GSN-AS1Q9NRJ2 163 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 CARHSP1Q9Y2V2 147 aaKnown RBP8.87□□□□□ -0.99
SHANK2-219ENST00000606715 A0A087WWC5 75 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 TMEM14EPQ6UXP3 125 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 C1QL4Q86Z23 238 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 LYPD1Q8N2G4 141 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 IFI27L1Q96BM0 104 aa8.87□□□□□ -0.99
SHANK2-219ENST00000606715 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.86□□□□□ -0.99
SHANK2-219ENST00000606715 LGALS1P09382 135 aaKnown RBP8.86□□□□□ -0.99
SHANK2-219ENST00000606715 GAGE6Q13070 117 aa8.86□□□□□ -0.99
SHANK2-219ENST00000606715 SUMO4Q6EEV6 95 aa8.86□□□□□ -0.99
SHANK2-219ENST00000606715 Q9HAA7 133 aa8.86□□□□□ -0.99
SHANK2-219ENST00000606715 ADMP35318 185 aa8.86□□□□□ -0.99
SHANK2-219ENST00000606715 RPL23P62829 140 aaKnown RBP8.86□□□□□ -0.99
SHANK2-219ENST00000606715 MRPL27Q9P0M9 148 aaKnown RBP8.86□□□□□ -0.99
SHANK2-219ENST00000606715 HELZP42694 1942 aaKnown RBP8.86□□□□□ -0.99
SHANK2-219ENST00000606715 IFITM2Q01629 132 aa8.86□□□□□ -0.99
SHANK2-219ENST00000606715 ZNF479Q96JC4 524 aa8.86□□□□□ -0.99
SHANK2-219ENST00000606715 D6R8Y8 96 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 IGKV1-5P01602 117 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 ANGP03950 147 aaKnown RBP8.85□□□□□ -0.99
SHANK2-219ENST00000606715 SMPXQ9UHP9 88 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 GAGE2EQ4V326 116 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 SPATA31B1PQ5VZV4 182 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 Q6ZR03 302 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 ORAOV1Q8WV07 137 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 TMEM243Q9BU79 118 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 GAGE2DQ9UEU5 116 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 PCNX2A6NKB5 2137 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 A0A0J9YY99 117 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 NDUFB8O95169 186 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 OVOL2Q9BRP0 275 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 TIMM21Q9BVV7 248 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 SPRY4Q9C004 299 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 PRORYQ9H606 182 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 MED12Q93074 2177 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 NDUFA4O00483 81 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 GAGE2BQ13066 116 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 PIFOQ8TCI5 191 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 OCC1Q8TAD7 63 aa8.85□□□□□ -0.99
SHANK2-219ENST00000606715 MUC6Q6W4X9 2439 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 IGHV1OR15-1A0A075B7D0 117 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 LINC00473A8K010 186 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 ZNRF2Q8NHG8 242 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 DNAJC30Q96LL9 226 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 SPXQ9BT56 116 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 HEATR1Q9H583 2144 aaKnown RBP8.84□□□□□ -0.99
SHANK2-219ENST00000606715 TRAV1-1A0A0B4J248 108 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 H0YIZ8 118 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 IGLV2-23P01705 113 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 IGHV4-59P01825 116 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 GP9P14770 177 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 PMVKQ15126 192 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 WT1P19544 449 aaPredicted RBP8.84□□□□□ -0.99
SHANK2-219ENST00000606715 LOXP28300 417 aaPredicted RBP8.84□□□□□ -0.99
SHANK2-219ENST00000606715 RBMY1FQ15415 496 aaKnown RBP8.84□□□□□ -0.99
SHANK2-219ENST00000606715 OCIAD2Q56VL3 154 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 RPP25LQ8N5L8 163 aaKnown RBP8.84□□□□□ -0.99
SHANK2-219ENST00000606715 TTC28Q96AY4 2481 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 FGF16O43320 207 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 IL17DQ8TAD2 202 aa8.84□□□□□ -0.99
SHANK2-219ENST00000606715 SAMD5Q5TGI4 173 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 CHCHD1Q96BP2 118 aaKnown RBP8.83□□□□□ -1
SHANK2-219ENST00000606715 ZNF625Q96I27 306 aaPredicted RBP8.83□□□□□ -1
SHANK2-219ENST00000606715 ARMS2P0C7Q2 107 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 TAL2Q16559 108 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 MGST2Q99735 147 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 PRSS29PA6NIE9 313 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 CDKN1BP46527 198 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 ZNF833PQ6ZTB9 187 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 SHANK2-AS3Q9BTD1 123 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 PFN2P35080 140 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 ZFAND6Q6FIF0 208 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 C8orf31Q8N9H6 132 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 SCN8AQ9UQD0 1980 aa8.83□□□□□ -1
SHANK2-219ENST00000606715 TRAV12-2A0A075B6T6 113 aa8.82□□□□□ -1
SHANK2-219ENST00000606715 TRAV8-1A0A0A6YYK1 113 aa8.82□□□□□ -1
SHANK2-219ENST00000606715 DAZAP2Q15038 168 aaPredicted RBP8.82□□□□□ -1
SHANK2-219ENST00000606715 COL4A4P53420 1690 aaPredicted RBP8.82□□□□□ -1
SHANK2-219ENST00000606715 IGKV1-16P04430 117 aa8.82□□□□□ -1
SHANK2-219ENST00000606715 FAM120AOSQ5T036 256 aa8.82□□□□□ -1
SHANK2-219ENST00000606715 A8MXK9 166 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms