RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 SPART-AS1P0CW21 52 aa8.76□□□□□ -1.01
CTSA-210ENST00000606000 PYYP10082 97 aa8.76□□□□□ -1.01
CTSA-210ENST00000606000 RRN3P1Q2M238 152 aa8.76□□□□□ -1.01
CTSA-210ENST00000606000 CHAC2Q8WUX2 184 aa8.76□□□□□ -1.01
CTSA-210ENST00000606000 PFDN5Q99471 154 aa8.76□□□□□ -1.01
CTSA-210ENST00000606000 SLC25A31Q9H0C2 315 aa8.76□□□□□ -1.01
CTSA-210ENST00000606000 RNF24Q9Y225 148 aa8.76□□□□□ -1.01
CTSA-210ENST00000606000 TMEM189A5PLL7 270 aa8.75□□□□□ -1.01
CTSA-210ENST00000606000 MPC2O95563 127 aa8.75□□□□□ -1.01
CTSA-210ENST00000606000 AMBPP02760 352 aa8.75□□□□□ -1.01
CTSA-210ENST00000606000 AZU1P20160 251 aa8.75□□□□□ -1.01
CTSA-210ENST00000606000 MIR17HGQ75NE6 70 aa8.75□□□□□ -1.01
CTSA-210ENST00000606000 SLC25A2Q9BXI2 301 aa8.75□□□□□ -1.01
CTSA-210ENST00000606000 SMIM3Q9BZL3 60 aa8.75□□□□□ -1.01
CTSA-210ENST00000606000 WDR61Q9GZS3 305 aaKnown RBP8.75□□□□□ -1.01
CTSA-210ENST00000606000 PLAC8L1A1L4L8 177 aa8.74□□□□□ -1.01
CTSA-210ENST00000606000 J3KRW8 73 aa8.74□□□□□ -1.01
CTSA-210ENST00000606000 M0R3E3 92 aa8.74□□□□□ -1.01
CTSA-210ENST00000606000 MPDU1O75352 247 aa8.74□□□□□ -1.01
CTSA-210ENST00000606000 NDUFB4O95168 129 aa8.74□□□□□ -1.01
CTSA-210ENST00000606000 HTN3P15516 51 aa8.74□□□□□ -1.01
CTSA-210ENST00000606000 CYCSP99999 105 aaKnown RBP8.74□□□□□ -1.01
CTSA-210ENST00000606000 NIPSNAP3BQ9BS92 247 aa8.74□□□□□ -1.01
CTSA-210ENST00000606000 PPP1R14DQ9NXH3 145 aa8.74□□□□□ -1.01
CTSA-210ENST00000606000 MBD2Q9UBB5 411 aa8.74□□□□□ -1.01
CTSA-210ENST00000606000 hCG_2014768A0A024R1R8 64 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 TRBV19A0A075B6N1 114 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 EIF3GO75821 320 aaKnown RBP eCLIP8.73□□□□□ -1.01
CTSA-210ENST00000606000 HTN1P15515 57 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 CDKN1BP46527 198 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 TCTAP57738 103 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 Q5BKY6 102 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 EXOC3-AS1Q8N2X6 119 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 BLNKQ8WV28 456 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 FAM167A-AS1Q96KT0 104 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 ATP5SQ99766 215 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 TMEM14CQ9P0S9 112 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 HSPB11Q9Y547 144 aa8.73□□□□□ -1.01
CTSA-210ENST00000606000 CT45A10P0DMU9 189 aa8.72□□□□□ -1.01
CTSA-210ENST00000606000 ERCC8Q13216 396 aa8.72□□□□□ -1.01
CTSA-210ENST00000606000 GUK1Q16774 197 aa8.72□□□□□ -1.01
CTSA-210ENST00000606000 GFI1BQ5VTD9 330 aa8.72□□□□□ -1.01
CTSA-210ENST00000606000 OR10J6PQ8NGY7 276 aa8.72□□□□□ -1.01
CTSA-210ENST00000606000 LINC01587Q99440 93 aa8.72□□□□□ -1.01
CTSA-210ENST00000606000 WFDC1Q9HC57 220 aa8.72□□□□□ -1.01
CTSA-210ENST00000606000 VPS13DQ5THJ4 4388 aa8.71□□□□□ -1.01
CTSA-210ENST00000606000 NPIPB6E9PJ23 425 aa8.71□□□□□ -1.02
CTSA-210ENST00000606000 SMLR1H3BR10 107 aa8.71□□□□□ -1.02
CTSA-210ENST00000606000 GIPP09681 153 aaPredicted RBP8.71□□□□□ -1.02
CTSA-210ENST00000606000 OR10J4P0C629 311 aa8.71□□□□□ -1.02
CTSA-210ENST00000606000 PET100P0DJ07 73 aa8.71□□□□□ -1.02
CTSA-210ENST00000606000 HIST1H1EP10412 219 aaKnown RBP8.71□□□□□ -1.02
CTSA-210ENST00000606000 RPL12P30050 165 aaKnown RBP8.71□□□□□ -1.02
CTSA-210ENST00000606000 DAD1P61803 113 aa8.71□□□□□ -1.02
CTSA-210ENST00000606000 NDUFAF3Q9BU61 184 aa8.71□□□□□ -1.02
CTSA-210ENST00000606000 KMT2AQ03164 3969 aa8.71□□□□□ -1.02
CTSA-210ENST00000606000 TEX48A0A1B0GUV7 120 aa8.7□□□□□ -1.02
CTSA-210ENST00000606000 ZNF253O75346 499 aa8.7□□□□□ -1.02
CTSA-210ENST00000606000 DEFB130BP0DP73 79 aa8.7□□□□□ -1.02
CTSA-210ENST00000606000 DEFB130AP0DP74 79 aa8.7□□□□□ -1.02
CTSA-210ENST00000606000 Q6ZNX1 250 aa8.7□□□□□ -1.02
CTSA-210ENST00000606000 OR2T35Q8NGX2 323 aa8.7□□□□□ -1.02
CTSA-210ENST00000606000 FXYD5Q96DB9 178 aa8.7□□□□□ -1.02
CTSA-210ENST00000606000 ZNF503Q96F45 646 aa8.7□□□□□ -1.02
CTSA-210ENST00000606000 PHYHIPLQ96FC7 376 aa8.7□□□□□ -1.02
CTSA-210ENST00000606000 TIMM9Q9Y5J7 89 aa8.7□□□□□ -1.02
CTSA-210ENST00000606000 IGKV2-40A0A087WW87 121 aaPredicted RBP8.69□□□□□ -1.02
CTSA-210ENST00000606000 FXYD6-FXYD2A0A087WZ82 144 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 TRAV12-3A0A0B4J271 114 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 C17orf112F2Z3M2 114 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 IGKV2D-40P01614 121 aaPredicted RBP8.69□□□□□ -1.02
CTSA-210ENST00000606000 TSPOP30536 169 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 TAS2R60P59551 318 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 ICAM4Q14773 271 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 FFAR4Q5NUL3 377 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 FAM122CQ6P4D5 195 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 TMEM88Q6PEY1 159 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 TMEM256Q8N2U0 113 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 RNASE8Q8TDE3 154 aaKnown RBP8.69□□□□□ -1.02
CTSA-210ENST00000606000 MRPL32Q9BYC8 188 aaKnown RBP8.69□□□□□ -1.02
CTSA-210ENST00000606000 OR51M1Q9H341 326 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 KCNIP2Q9NS61 270 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 FUT9Q9Y231 359 aa8.69□□□□□ -1.02
CTSA-210ENST00000606000 A0A1B0GVG6 124 aa8.68□□□□□ -1.02
CTSA-210ENST00000606000 LYRM9A8MSI8 78 aa8.68□□□□□ -1.02
CTSA-210ENST00000606000 PDE6HQ13956 83 aa8.68□□□□□ -1.02
CTSA-210ENST00000606000 MRPL53Q96EL3 112 aaKnown RBP8.68□□□□□ -1.02
CTSA-210ENST00000606000 C16orf74Q96GX8 76 aa8.68□□□□□ -1.02
CTSA-210ENST00000606000 PAXXQ9BUH6 204 aa8.68□□□□□ -1.02
CTSA-210ENST00000606000 AGPAT4-IT1Q9H0P7 198 aa8.68□□□□□ -1.02
CTSA-210ENST00000606000 G3V3Q6 166 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 H7BYZ3 331 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 LCE2BO14633 110 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 OR7C2O60412 319 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 IFNA5P01569 189 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 NBEAP1P0C6P0 100 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 LEPP41159 167 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 CD300CQ08708 224 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 BTN1A1Q13410 526 aa8.67□□□□□ -1.02
CTSA-210ENST00000606000 PRR9Q5T870 116 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms