RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	CST9LP1	Q5W188	147 aa		16.34	■□□□□ 0.21
LTBP4-227	ENST00000600026	IGFL4	Q6B9Z1	124 aa		16.34	■□□□□ 0.21
LTBP4-227	ENST00000600026	EXOC3-AS1	Q8N2X6	119 aa		16.34	■□□□□ 0.21
LTBP4-227	ENST00000600026	C19orf73	Q9NVV2	129 aa		16.34	■□□□□ 0.21
LTBP4-227	ENST00000600026	YTHDF2	Q9Y5A9	579 aa	Known RBP	16.34	■□□□□ 0.21
LTBP4-227	ENST00000600026	SUMO1	P63165	101 aa	Known RBP	16.33	■□□□□ 0.2
LTBP4-227	ENST00000600026	PSMG4	Q5JS54	123 aa		16.33	■□□□□ 0.2
LTBP4-227	ENST00000600026	FAM24B	Q8N5W8	94 aa		16.33	■□□□□ 0.2
LTBP4-227	ENST00000600026	RNF182	Q8N6D2	247 aa		16.33	■□□□□ 0.2
LTBP4-227	ENST00000600026	CMTM2	Q8TAZ6	248 aa		16.33	■□□□□ 0.2
LTBP4-227	ENST00000600026	MRPL53	Q96EL3	112 aa	Known RBP	16.33	■□□□□ 0.2
LTBP4-227	ENST00000600026	HLA-DMB	P28068	263 aa		16.32	■□□□□ 0.2
LTBP4-227	ENST00000600026	CSN1S1	P47710	185 aa		16.32	■□□□□ 0.2
LTBP4-227	ENST00000600026	HAGH	Q16775	308 aa		16.32	■□□□□ 0.2
LTBP4-227	ENST00000600026	DEFB121	Q5J5C9	76 aa		16.32	■□□□□ 0.2
LTBP4-227	ENST00000600026	ZNF738	Q8NE65	137 aa		16.32	■□□□□ 0.2
LTBP4-227	ENST00000600026	RXFP4	Q8TDU9	374 aa		16.32	■□□□□ 0.2
LTBP4-227	ENST00000600026	TXNDC17	Q9BRA2	123 aa		16.32	■□□□□ 0.2
LTBP4-227	ENST00000600026	OR11H12	B2RN74	326 aa		16.31	■□□□□ 0.2
LTBP4-227	ENST00000600026	SLC25A5	P05141	298 aa	Known RBP	16.31	■□□□□ 0.2
LTBP4-227	ENST00000600026	BCL2	P10415	239 aa		16.31	■□□□□ 0.2
LTBP4-227	ENST00000600026	DEFB131A	P59861	70 aa		16.31	■□□□□ 0.2
LTBP4-227	ENST00000600026	DEFB125	Q8N687	156 aa		16.31	■□□□□ 0.2
LTBP4-227	ENST00000600026	C20orf173	Q96LM9	149 aa		16.31	■□□□□ 0.2
LTBP4-227	ENST00000600026	MAP6D1	Q9H9H5	199 aa		16.31	■□□□□ 0.2
LTBP4-227	ENST00000600026	RBFOX3	A6NFN3	312 aa		16.3	■□□□□ 0.2
LTBP4-227	ENST00000600026	GGTLC3	B5MD39	225 aa		16.3	■□□□□ 0.2
LTBP4-227	ENST00000600026	IGHV4-30-4	P0DP06	118 aa		16.3	■□□□□ 0.2
LTBP4-227	ENST00000600026	C5orf17	Q8NAS9	161 aa		16.3	■□□□□ 0.2
LTBP4-227	ENST00000600026	FAM110A	Q9BQ89	295 aa		16.3	■□□□□ 0.2
LTBP4-227	ENST00000600026	VAX2	Q9UIW0	290 aa		16.3	■□□□□ 0.2
LTBP4-227	ENST00000600026	LOC102723971	A0A1B0GUV8	181 aa		16.29	■□□□□ 0.2
LTBP4-227	ENST00000600026	C11orf94	C9JXX5	98 aa		16.29	■□□□□ 0.2
LTBP4-227	ENST00000600026		M0R3E3	92 aa		16.29	■□□□□ 0.2
LTBP4-227	ENST00000600026	ARL6IP6	Q8N6S5	226 aa		16.29	■□□□□ 0.2
LTBP4-227	ENST00000600026	RPUSD4	Q96CM3	377 aa	Known RBP	16.29	■□□□□ 0.2
LTBP4-227	ENST00000600026	FAM210A	Q96ND0	272 aa		16.29	■□□□□ 0.2
LTBP4-227	ENST00000600026	EIF5A2	Q9GZV4	153 aa	Known RBP	16.29	■□□□□ 0.2
LTBP4-227	ENST00000600026	ATP5G3	P48201	142 aa		16.28	■□□□□ 0.2
LTBP4-227	ENST00000600026	TOR2A	Q5JU69	321 aa		16.28	■□□□□ 0.2
LTBP4-227	ENST00000600026	TCEAL7	Q9BRU2	100 aa		16.28	■□□□□ 0.2
LTBP4-227	ENST00000600026	SRD5A3	Q9H8P0	318 aa		16.28	■□□□□ 0.2
LTBP4-227	ENST00000600026	ZNF705F	A8MVS1	300 aa	Predicted RBP	16.27	■□□□□ 0.2
LTBP4-227	ENST00000600026		F6UZH7	168 aa		16.27	■□□□□ 0.2
LTBP4-227	ENST00000600026	MEF2B	Q02080	365 aa	Predicted RBP	16.27	■□□□□ 0.2
LTBP4-227	ENST00000600026	ZNF506	Q5JVG8	444 aa		16.27	■□□□□ 0.2
LTBP4-227	ENST00000600026	EBLN2	Q6P2I7	272 aa		16.27	■□□□□ 0.2
LTBP4-227	ENST00000600026	EPDR1	Q9UM22	224 aa		16.27	■□□□□ 0.2
LTBP4-227	ENST00000600026	RPH3AL	Q9UNE2	315 aa		16.27	■□□□□ 0.2
LTBP4-227	ENST00000600026		A8MZ25	164 aa		16.26	■□□□□ 0.19
LTBP4-227	ENST00000600026	ZNF124	Q15973	351 aa		16.26	■□□□□ 0.19
LTBP4-227	ENST00000600026	APRG1	Q8IVJ8	170 aa		16.26	■□□□□ 0.19
LTBP4-227	ENST00000600026	CCDC28A	Q8IWP9	274 aa		16.26	■□□□□ 0.19
LTBP4-227	ENST00000600026	CITED4	Q96RK1	184 aa		16.26	■□□□□ 0.19
LTBP4-227	ENST00000600026	RARRES2	Q99969	163 aa		16.26	■□□□□ 0.19
LTBP4-227	ENST00000600026	DNAH9	Q9NYC9	4486 aa		16.25	■□□□□ 0.19
LTBP4-227	ENST00000600026	DIRC3	C9JPN6	131 aa		16.25	■□□□□ 0.19
LTBP4-227	ENST00000600026		K7EQM0	130 aa		16.25	■□□□□ 0.19
LTBP4-227	ENST00000600026	FRMD6-AS1	P0C7T7	363 aa		16.25	■□□□□ 0.19
LTBP4-227	ENST00000600026	GNG5	P63218	68 aa		16.25	■□□□□ 0.19
LTBP4-227	ENST00000600026	FOXI2	Q6ZQN5	318 aa		16.25	■□□□□ 0.19
LTBP4-227	ENST00000600026	OR10J6P	Q8NGY7	276 aa		16.25	■□□□□ 0.19
LTBP4-227	ENST00000600026	HIST1H2BA	Q96A08	127 aa		16.25	■□□□□ 0.19
LTBP4-227	ENST00000600026	TUBA4B	Q9H853	241 aa		16.25	■□□□□ 0.19
LTBP4-227	ENST00000600026	SERTM2	A0A1B0GWG4	89 aa		16.24	■□□□□ 0.19
LTBP4-227	ENST00000600026	PDE6D	O43924	150 aa		16.24	■□□□□ 0.19
LTBP4-227	ENST00000600026	PEA15	Q15121	130 aa		16.24	■□□□□ 0.19
LTBP4-227	ENST00000600026	SAV1	Q9H4B6	383 aa	Predicted RBP	16.24	■□□□□ 0.19
LTBP4-227	ENST00000600026	PRAC2	D3DTV9	90 aa		16.23	■□□□□ 0.19
LTBP4-227	ENST00000600026	PEX7	O00628	323 aa		16.23	■□□□□ 0.19
LTBP4-227	ENST00000600026	TCRA	P04437	139 aa		16.23	■□□□□ 0.19
LTBP4-227	ENST00000600026	GOLT1A	Q6ZVE7	132 aa		16.23	■□□□□ 0.19
LTBP4-227	ENST00000600026	OR8A1	Q8NGG7	326 aa		16.23	■□□□□ 0.19
LTBP4-227	ENST00000600026	ATG101	Q9BSB4	218 aa		16.23	■□□□□ 0.19
LTBP4-227	ENST00000600026	MED9	Q9NWA0	146 aa		16.23	■□□□□ 0.19
LTBP4-227	ENST00000600026		A0A0J9YX75	114 aa		16.22	■□□□□ 0.19
LTBP4-227	ENST00000600026	RAB19	A4D1S5	217 aa		16.22	■□□□□ 0.19
LTBP4-227	ENST00000600026	RBAKDN	A6NC62	111 aa		16.22	■□□□□ 0.19
LTBP4-227	ENST00000600026	DUSP14	O95147	198 aa	Known RBP	16.22	■□□□□ 0.19
LTBP4-227	ENST00000600026	HIST1H1A	Q02539	215 aa	Predicted RBP	16.22	■□□□□ 0.19
LTBP4-227	ENST00000600026	CYB561D1	Q8N8Q1	229 aa		16.22	■□□□□ 0.19
LTBP4-227	ENST00000600026	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	RBMY1B	A6NDE4	496 aa	Known RBP	16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	RBMY1E	A6NEQ0	496 aa	Known RBP	16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	KNCN	A6PVL3	124 aa		16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026		F6UB75	175 aa		16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	NDUFS6	O75380	124 aa	Known RBP	16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	IGKV2D-40	P01614	121 aa	Predicted RBP	16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	RBMY1D	P0C7P1	496 aa	Known RBP	16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	PRB4	P10163	310 aa	Predicted RBP	16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	DEFB1	P60022	68 aa		16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	ACTL10	Q5JWF8	245 aa		16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	B9D2	Q9BPU9	175 aa		16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	SMDT1	Q9H4I9	107 aa		16.21	■□□□□ 0.19
LTBP4-227	ENST00000600026	SCO2	A0A1W2PP80	73 aa		16.2	■□□□□ 0.18
LTBP4-227	ENST00000600026	LINC00862	A6NCI5	91 aa		16.2	■□□□□ 0.18
LTBP4-227	ENST00000600026	HLA-DRB4	P13762	266 aa		16.2	■□□□□ 0.18
LTBP4-227	ENST00000600026	AKR1C3	P42330	323 aa		16.2	■□□□□ 0.18
LTBP4-227	ENST00000600026	LINC00322	Q6ZN03	302 aa	Predicted RBP	16.2	■□□□□ 0.18
LTBP4-227	ENST00000600026	STH	Q8IWL8	128 aa		16.2	■□□□□ 0.18

Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms