RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 C22orf39Q6P5X5 142 aa4.38□□□□□ -1.71
LINC01538-201ENST00000588074 MARCH3Q86UD3 253 aa4.38□□□□□ -1.71
LINC01538-201ENST00000588074 CYYR1Q96J86 154 aa4.38□□□□□ -1.71
LINC01538-201ENST00000588074 HIST1H4GQ99525 98 aa4.38□□□□□ -1.71
LINC01538-201ENST00000588074 IGLV3-16A0A075B6K0 115 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 IGKV6D-21A0A0A0MT36 114 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 IGKV6-21A0A0C4DH24 114 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 A0A1B0GWA3 101 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 C19orf71A6NCJ1 209 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 LTAP01374 205 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 CACNG7P62955 275 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 UBE2L3P68036 154 aaKnown RBP4.37□□□□□ -1.71
LINC01538-201ENST00000588074 ZNF816Q0VGE8 651 aaPredicted RBP4.37□□□□□ -1.71
LINC01538-201ENST00000588074 FXYD3Q14802 87 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 C9orf57Q5W0N0 161 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 C11orf53Q8IXP5 236 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 COPS9Q8WXC6 57 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 CNRIP1Q96F85 164 aaPredicted RBP4.37□□□□□ -1.71
LINC01538-201ENST00000588074 DPH3P1Q9H4G8 78 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 NXT2Q9NPJ8 142 aaKnown RBP4.37□□□□□ -1.71
LINC01538-201ENST00000588074 LAMTOR3Q9UHA4 124 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 DOCK11Q5JSL3 2073 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 SMIM26A0A096LP01 95 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 LOC107984156A0A0G2JMH3 177 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 H3BVH4 76 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 NPC2P61916 151 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 HIST1H4AP62805 103 aaKnown RBP4.37□□□□□ -1.71
LINC01538-201ENST00000588074 ZNF56Q15929 161 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 DEFB121Q5J5C9 76 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 ARL17AQ8IVW1 177 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 DRAM1Q8N682 238 aa4.37□□□□□ -1.71
LINC01538-201ENST00000588074 NCOA6Q14686 2063 aaPredicted RBP4.37□□□□□ -1.71
LINC01538-201ENST00000588074 A0A087WZ39 114 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 TMSB15BA0A087X1C1 80 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 LINC01548A6NM66 108 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 H3BMM0 161 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 CISD3P0C7P0 127 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 ARL14EPLP0DKL9 152 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 UBE2D1P51668 147 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 HILS1P60008 231 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 CCL8P80075 99 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 TMEM155Q4W5P6 130 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 C9orf139Q6ZV77 190 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 TMEM190Q8WZ59 177 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 UBE2WQ96B02 151 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 IFI27L1Q96BM0 104 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 OVOL2Q9BRP0 275 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 C16orf95Q9H693 158 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 PLEKHA3Q9HB20 300 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 COL4A3Q01955 1670 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 TRIP12Q14669 1992 aaPredicted RBP4.36□□□□□ -1.71
LINC01538-201ENST00000588074 TRAV26-2A0A0B4J265 109 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 PGPA6NDG6 321 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 IGLV2-8P01709 118 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 CTLA4P16410 223 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 LY6G5CQ5SRR4 150 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 LINC00643Q86TS7 51 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 GTSCR1Q86UQ5 136 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 OR8A1Q8NGG7 326 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 BORCS8Q96FH0 119 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 IGF2BP2-AS1Q96M15 143 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 UPK3BQ9BT76 320 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 KRTAP17-1Q9BYP8 105 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 PTPRSQ13332 1948 aa4.36□□□□□ -1.71
LINC01538-201ENST00000588074 MYBPHLA2RUH7 354 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 LYZL6O75951 148 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 LINC00271P0C7V0 271 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 IGHV4-30-4P0DP06 118 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 IAPPP10997 89 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 GFERP55789 205 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 RPL18Q07020 188 aaKnown RBP4.35□□□□□ -1.71
LINC01538-201ENST00000588074 FAM201AQ5SY85 155 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 IGFL2Q6UWQ7 119 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 Q6ZR03 302 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 C5orf38Q86SI9 138 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 NTN5Q8WTR8 489 aaPredicted RBP4.35□□□□□ -1.71
LINC01538-201ENST00000588074 C17orf77Q96MU5 243 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 A0A0U1RQV1 116 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 LINC01549A6NIU2 74 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 H3BT86 120 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 CA6P23280 308 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 MYCNOSP40205 109 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 CCL14Q16627 93 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 SPANXN5Q5MJ07 72 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 CEMP1Q6PRD7 247 aaPredicted RBP4.35□□□□□ -1.71
LINC01538-201ENST00000588074 ZFP2Q6ZN57 461 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 SMIM14Q96QK8 99 aa4.35□□□□□ -1.71
LINC01538-201ENST00000588074 PTPRBP23467 1997 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 HIGD1CA8MV81 97 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 INAFM1C9JVW0 142 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 HBDP02042 147 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 LIFP15018 202 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 HERVK_113P61574 105 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 ERVK-16P61578 105 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 Q6ZRU5 148 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 ZCCHC24Q8N2G6 241 aaKnown RBP4.34□□□□□ -1.71
LINC01538-201ENST00000588074 SERP2Q8N6R1 65 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 NT5CQ8TCD5 201 aa4.34□□□□□ -1.71
LINC01538-201ENST00000588074 C10orf105Q8TEF2 133 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms