RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 SCGB2B2Q4G0G5 96 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 PRR9Q5T870 116 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 GFI1BQ5VTD9 330 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 LGI3Q8N145 548 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CCDC71LQ8N9Z2 235 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 OR8A1Q8NGG7 326 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 COQ8AQ8NI60 647 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 GNPNAT1Q96EK6 184 aaPredicted RBP5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 FAM19A4Q96LR4 140 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SHANK2-AS3Q9BTD1 123 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 RSG1Q9BU20 258 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 PDCD10Q9BUL8 212 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 NOP10Q9NPE3 64 aaKnown RBP5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 RPRMQ9NS64 109 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 MSRB1Q9NZV6 116 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SHPKQ9UHJ6 478 aa5.04□□□□□ -1.6
CDK5RAP3-221ENST00000581662 A0A0J9YY99 117 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 ZFP92A6NM28 416 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 H3BNG1 76 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CTDSPLO15194 276 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 IGLV2-11P01706 119 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 S100A1P23297 94 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 CCR6P51684 374 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 ARL16Q0P5N6 197 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 Q6ZTI0 123 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 ACOT7LQ6ZUV0 252 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 LRTM2Q8N967 370 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 OR4D5Q8NGN0 318 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 ZFAND1Q8TCF1 268 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 TMEM263Q8WUH6 116 aaKnown RBP5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 NARS2Q96I59 477 aaKnown RBP5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 SLC25A22Q9H936 323 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 U3KQ87 197 aa5.03□□□□□ -1.6
CDK5RAP3-221ENST00000581662 PANO1I0J062 215 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 K7EPK0 472 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 ATP6V1G1O75348 118 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 SNRPCP09234 159 aaKnown RBP5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 NPSP0C0P6 89 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 S100GP29377 79 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 TAS2R60P59551 318 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 CD300CQ08708 224 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 WFDC2Q14508 124 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 ETFRF1Q6IPR1 90 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 OR8I2Q8N0Y5 310 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 SAT2Q96F10 170 aaPredicted RBP5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 C16orf74Q96GX8 76 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 LINC01600Q96MT4 127 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 C7orf50Q9BRJ6 194 aaKnown RBP5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 C11orf1Q9H5F2 150 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 ENY2Q9NPA8 101 aa5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 ZNF331Q9NQX6 463 aaPredicted RBP5.02□□□□□ -1.61
CDK5RAP3-221ENST00000581662 H3BP45 60 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 H3BQ15 152 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 NXPH4O95158 308 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 CT45A10P0DMU9 189 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 IGLC2P0DOY2 106 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 ZNF182P17025 639 aaPredicted RBP5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 M6PRP20645 277 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 NUP62P37198 522 aaPredicted RBP5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 ID1P41134 155 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 MEOX2P50222 304 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 CTAG1AP78358 180 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 HIST1H1AQ02539 215 aaPredicted RBP5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 SSBP1Q04837 148 aaKnown RBP5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 ASAH1Q13510 395 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 PSG3Q16557 428 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 PXDC1Q5TGL8 231 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 EBLN2Q6P2I7 272 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 DYNC2LI1Q8TCX1 351 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 DNAJC4Q9NNZ3 241 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 TIMM8BQ9Y5J9 83 aaPredicted RBP5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 V9GYH0 126 aa5.01□□□□□ -1.61
CDK5RAP3-221ENST00000581662 H3BTX0 84 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 ZNF324O75467 553 aaPredicted RBP5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 GAGE7O76087 117 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 ATG12O94817 140 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 S100A6P06703 90 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 LINC00869P0C866 280 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 GAGE12FP0CL80 117 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 GAGE12GP0CL81 117 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 GAGE12IP0CL82 117 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 AKAIN1P0CW23 69 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 CDKN1BP46527 198 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 ACOT6Q3I5F7 207 aaPredicted RBP5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 TMEM144Q7Z5S9 345 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 WFDC10BQ8IUB3 73 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 OR1B1Q8NGR6 318 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 RNASE11Q8TAA1 199 aaKnown RBP5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 TMEM37Q8WXS4 190 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 SLC35E1Q96K37 410 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 PAXXQ9BUH6 204 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 SLIRPQ9GZT3 109 aaKnown RBP5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 TP53TG3Q9ULZ0 132 aa5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 RCL1Q9Y2P8 373 aaKnown RBP5□□□□□ -1.61
CDK5RAP3-221ENST00000581662 A0A087WXM4 84 aa4.99□□□□□ -1.61
CDK5RAP3-221ENST00000581662 SNRPGP15A8MWD9 76 aa4.99□□□□□ -1.61
CDK5RAP3-221ENST00000581662 KLLNB2CW77 178 aa4.99□□□□□ -1.61
CDK5RAP3-221ENST00000581662 FAM25AB3EWG3 89 aa4.99□□□□□ -1.61
CDK5RAP3-221ENST00000581662 FAM25CB3EWG5 89 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms