RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 DAD1P61803 113 aa9.06□□□□□ -0.96
NPLOC4-213ENST00000573519 FCN2Q15485 313 aa9.06□□□□□ -0.96
NPLOC4-213ENST00000573519 CHAC2Q8WUX2 184 aa9.06□□□□□ -0.96
NPLOC4-213ENST00000573519 LINC01587Q99440 93 aa9.06□□□□□ -0.96
NPLOC4-213ENST00000573519 PFDN5Q99471 154 aa9.06□□□□□ -0.96
NPLOC4-213ENST00000573519 SMIM3Q9BZL3 60 aa9.06□□□□□ -0.96
NPLOC4-213ENST00000573519 ZNF331Q9NQX6 463 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-213ENST00000573519 KMT2AQ03164 3969 aa9.05□□□□□ -0.96
NPLOC4-213ENST00000573519 MPDU1O75352 247 aa9.05□□□□□ -0.96
NPLOC4-213ENST00000573519 IGLC2P0DOY2 106 aa9.05□□□□□ -0.96
NPLOC4-213ENST00000573519 RPL12P30050 165 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-213ENST00000573519 OR10J6PQ8NGY7 276 aa9.05□□□□□ -0.96
NPLOC4-213ENST00000573519 HSPB11Q9Y547 144 aa9.05□□□□□ -0.96
NPLOC4-213ENST00000573519 PET100P0DJ07 73 aa9.04□□□□□ -0.96
NPLOC4-213ENST00000573519 P0DMU3 169 aa9.04□□□□□ -0.96
NPLOC4-213ENST00000573519 FAM231AP0DMU4 169 aa9.04□□□□□ -0.96
NPLOC4-213ENST00000573519 FAM231CP0DMU5 169 aa9.04□□□□□ -0.96
NPLOC4-213ENST00000573519 ATP5SQ99766 215 aa9.04□□□□□ -0.96
NPLOC4-213ENST00000573519 WDR61Q9GZS3 305 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-213ENST00000573519 MED28Q9H204 178 aa9.04□□□□□ -0.96
NPLOC4-213ENST00000573519 PRAC2D3DTV9 90 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 DEFB130BP0DP73 79 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 DEFB130AP0DP74 79 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 PYYP10082 97 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 AZU1P20160 251 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 CDKN1BP46527 198 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 OXA1LQ15070 435 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 GUK1Q16774 197 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 MIR17HGQ75NE6 70 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 UBE2DNLQ8IWF7 75 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 TMEM256Q8N2U0 113 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 SAT2Q96F10 170 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 PARD6GQ9BYG4 376 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 WFDC1Q9HC57 220 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 ZNF586Q9NXT0 402 aa9.03□□□□□ -0.96
NPLOC4-213ENST00000573519 J3KRW8 73 aa9.02□□□□□ -0.97
NPLOC4-213ENST00000573519 SLC25A2Q9BXI2 301 aa9.02□□□□□ -0.97
NPLOC4-213ENST00000573519 LYRM9A8MSI8 78 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 IFNA5P01569 189 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 TSPOP30536 169 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 TAS2R60P59551 318 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 Q5BKY6 102 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 TMEM88Q6PEY1 159 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 POM121L12Q8N7R1 296 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 SCGB1C1Q8TD33 95 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 BLNKQ8WV28 456 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 FAM210BQ96KR6 192 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 FAM167A-AS1Q96KT0 104 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 TMEM14CQ9P0S9 112 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 TIMM9Q9Y5J7 89 aa9.01□□□□□ -0.97
NPLOC4-213ENST00000573519 TRBV19A0A075B6N1 114 aa9□□□□□ -0.97
NPLOC4-213ENST00000573519 C17orf112F2Z3M2 114 aa9□□□□□ -0.97
NPLOC4-213ENST00000573519 EIF3GO75821 320 aaKnown RBP eCLIP9□□□□□ -0.97
NPLOC4-213ENST00000573519 NDUFB4O95168 129 aa9□□□□□ -0.97
NPLOC4-213ENST00000573519 HIST1H1EP10412 219 aaKnown RBP9□□□□□ -0.97
NPLOC4-213ENST00000573519 KIR3DS1Q14943 382 aa9□□□□□ -0.97
NPLOC4-213ENST00000573519 RGS21Q2M5E4 152 aa9□□□□□ -0.97
NPLOC4-213ENST00000573519 FFAR4Q5NUL3 377 aa9□□□□□ -0.97
NPLOC4-213ENST00000573519 C16orf74Q96GX8 76 aa9□□□□□ -0.97
NPLOC4-213ENST00000573519 KCNIP2Q9NS61 270 aa9□□□□□ -0.97
NPLOC4-213ENST00000573519 VPS13DQ5THJ4 4388 aa8.99□□□□□ -0.97
NPLOC4-213ENST00000573519 F5H768 121 aa8.99□□□□□ -0.97
NPLOC4-213ENST00000573519 H7BYZ3 331 aa8.99□□□□□ -0.97
NPLOC4-213ENST00000573519 M0R2N4 97 aa8.99□□□□□ -0.97
NPLOC4-213ENST00000573519 M0R3E3 92 aa8.99□□□□□ -0.97
NPLOC4-213ENST00000573519 LEPP41159 167 aa8.99□□□□□ -0.97
NPLOC4-213ENST00000573519 GFI1BQ5VTD9 330 aa8.99□□□□□ -0.97
NPLOC4-213ENST00000573519 EXOC3-AS1Q8N2X6 119 aa8.99□□□□□ -0.97
NPLOC4-213ENST00000573519 FRAS1Q86XX4 4008 aa8.99□□□□□ -0.97
NPLOC4-213ENST00000573519 PLAC8L1A1L4L8 177 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 NPIPB6E9PJ23 425 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 ZNF253O75346 499 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 OR10J4P0C629 311 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 CT45A10P0DMU9 189 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 ERCC8Q13216 396 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 CCDC28AQ8IWP9 274 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 C20orf144Q9BQM9 153 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 PAXXQ9BUH6 204 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 OR51M1Q9H341 326 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 AAMDCQ9H7C9 122 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 NOP10Q9NPE3 64 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 FUT9Q9Y231 359 aa8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 TIMM8BQ9Y5J9 83 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-213ENST00000573519 IGLV2-18A0A075B6J9 118 aa8.97□□□□□ -0.97
NPLOC4-213ENST00000573519 TRAV12-3A0A0B4J271 114 aa8.97□□□□□ -0.97
NPLOC4-213ENST00000573519 ATP5G1P05496 136 aa8.97□□□□□ -0.97
NPLOC4-213ENST00000573519 GIPP09681 153 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-213ENST00000573519 ATP5G3P48201 142 aa8.97□□□□□ -0.97
NPLOC4-213ENST00000573519 ZNF493Q6ZR52 646 aa8.97□□□□□ -0.97
NPLOC4-213ENST00000573519 RNASE8Q8TDE3 154 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-213ENST00000573519 TMEM263Q8WUH6 116 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-213ENST00000573519 FXYD5Q96DB9 178 aa8.97□□□□□ -0.97
NPLOC4-213ENST00000573519 MRPL53Q96EL3 112 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-213ENST00000573519 MRPL32Q9BYC8 188 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-213ENST00000573519 OR7C2O60412 319 aa8.96□□□□□ -0.98
NPLOC4-213ENST00000573519 NUDT3O95989 172 aa8.96□□□□□ -0.98
NPLOC4-213ENST00000573519 NBEAP1P0C6P0 100 aa8.96□□□□□ -0.98
NPLOC4-213ENST00000573519 PDE6HQ13956 83 aa8.96□□□□□ -0.98
NPLOC4-213ENST00000573519 ICAM4Q14773 271 aa8.96□□□□□ -0.98
NPLOC4-213ENST00000573519 FAM122CQ6P4D5 195 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms