RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 PYYP10082 97 aa12.68□□□□□ -0.38
CTDNEP1-207ENST00000572043 OR10J6PQ8NGY7 276 aa12.68□□□□□ -0.38
CTDNEP1-207ENST00000572043 RNF126Q9BV68 326 aa12.68□□□□□ -0.38
CTDNEP1-207ENST00000572043 J3KRW8 73 aa12.67□□□□□ -0.38
CTDNEP1-207ENST00000572043 MPC2O95563 127 aa12.67□□□□□ -0.38
CTDNEP1-207ENST00000572043 AZU1P20160 251 aa12.67□□□□□ -0.38
CTDNEP1-207ENST00000572043 CDKN1BP46527 198 aa12.67□□□□□ -0.38
CTDNEP1-207ENST00000572043 KIR3DS1Q14943 382 aa12.67□□□□□ -0.38
CTDNEP1-207ENST00000572043 GUK1Q16774 197 aa12.67□□□□□ -0.38
CTDNEP1-207ENST00000572043 BLNKQ8WV28 456 aa12.67□□□□□ -0.38
CTDNEP1-207ENST00000572043 SMIM3Q9BZL3 60 aa12.67□□□□□ -0.38
CTDNEP1-207ENST00000572043 WDR61Q9GZS3 305 aaKnown RBP12.67□□□□□ -0.38
CTDNEP1-207ENST00000572043 TEX48A0A1B0GUV7 120 aa12.66□□□□□ -0.38
CTDNEP1-207ENST00000572043 DAD1P61803 113 aa12.66□□□□□ -0.38
CTDNEP1-207ENST00000572043 MIR17HGQ75NE6 70 aa12.66□□□□□ -0.38
CTDNEP1-207ENST00000572043 SLC25A2Q9BXI2 301 aa12.66□□□□□ -0.38
CTDNEP1-207ENST00000572043 TRBV19A0A075B6N1 114 aa12.65□□□□□ -0.38
CTDNEP1-207ENST00000572043 M0R3E3 92 aa12.65□□□□□ -0.38
CTDNEP1-207ENST00000572043 PET100P0DJ07 73 aa12.65□□□□□ -0.38
CTDNEP1-207ENST00000572043 ATP5SQ99766 215 aa12.65□□□□□ -0.38
CTDNEP1-207ENST00000572043 NDUFAF3Q9BU61 184 aa12.65□□□□□ -0.38
CTDNEP1-207ENST00000572043 TMEM14CQ9P0S9 112 aa12.65□□□□□ -0.38
CTDNEP1-207ENST00000572043 MBD2Q9UBB5 411 aa12.65□□□□□ -0.38
CTDNEP1-207ENST00000572043 HSPB11Q9Y547 144 aa12.65□□□□□ -0.38
CTDNEP1-207ENST00000572043 TIMM9Q9Y5J7 89 aa12.65□□□□□ -0.38
CTDNEP1-207ENST00000572043 ALG5Q9Y673 324 aa12.65□□□□□ -0.38
CTDNEP1-207ENST00000572043 HIST1H1EP10412 219 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-207ENST00000572043 FCN2Q15485 313 aa12.64□□□□□ -0.39
CTDNEP1-207ENST00000572043 EXOC3-AS1Q8N2X6 119 aa12.64□□□□□ -0.39
CTDNEP1-207ENST00000572043 NDUFB4O95168 129 aa12.63□□□□□ -0.39
CTDNEP1-207ENST00000572043 CT45A10P0DMU9 189 aa12.63□□□□□ -0.39
CTDNEP1-207ENST00000572043 DEFB130BP0DP73 79 aa12.63□□□□□ -0.39
CTDNEP1-207ENST00000572043 DEFB130AP0DP74 79 aa12.63□□□□□ -0.39
CTDNEP1-207ENST00000572043 RPL12P30050 165 aaKnown RBP12.63□□□□□ -0.39
CTDNEP1-207ENST00000572043 TAS2R60P59551 318 aa12.63□□□□□ -0.39
CTDNEP1-207ENST00000572043 ERCC8Q13216 396 aa12.63□□□□□ -0.39
CTDNEP1-207ENST00000572043 GFI1BQ5VTD9 330 aa12.63□□□□□ -0.39
CTDNEP1-207ENST00000572043 EPPK1P58107 5090 aaKnown RBP12.63□□□□□ -0.39
CTDNEP1-207ENST00000572043 PLAC8L1A1L4L8 177 aa12.62□□□□□ -0.39
CTDNEP1-207ENST00000572043 C17orf112F2Z3M2 114 aa12.62□□□□□ -0.39
CTDNEP1-207ENST00000572043 ZNF253O75346 499 aa12.62□□□□□ -0.39
CTDNEP1-207ENST00000572043 OR10J4P0C629 311 aa12.62□□□□□ -0.39
CTDNEP1-207ENST00000572043 TSPOP30536 169 aa12.62□□□□□ -0.39
CTDNEP1-207ENST00000572043 TMEM256Q8N2U0 113 aa12.62□□□□□ -0.39
CTDNEP1-207ENST00000572043 SCGB1C1Q8TD33 95 aa12.62□□□□□ -0.39
CTDNEP1-207ENST00000572043 FAM167A-AS1Q96KT0 104 aa12.62□□□□□ -0.39
CTDNEP1-207ENST00000572043 KCNIP2Q9NS61 270 aa12.62□□□□□ -0.39
CTDNEP1-207ENST00000572043 NPIPB6E9PJ23 425 aa12.61□□□□□ -0.39
CTDNEP1-207ENST00000572043 FFAR4Q5NUL3 377 aa12.61□□□□□ -0.39
CTDNEP1-207ENST00000572043 FAM122CQ6P4D5 195 aa12.61□□□□□ -0.39
CTDNEP1-207ENST00000572043 OR51M1Q9H341 326 aa12.61□□□□□ -0.39
CTDNEP1-207ENST00000572043 LYRM9A8MSI8 78 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 H7BYZ3 331 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 EIF3GO75821 320 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■□□□ 12.1
CTDNEP1-207ENST00000572043 IFNA5P01569 189 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 LEPP41159 167 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 ICAM4Q14773 271 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 OXA1LQ15070 435 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 TMEM88Q6PEY1 159 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 MRPL53Q96EL3 112 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 C16orf74Q96GX8 76 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 PAXXQ9BUH6 204 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 MRPL32Q9BYC8 188 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 AAMDCQ9H7C9 122 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 WFDC1Q9HC57 220 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 FUT9Q9Y231 359 aa12.6□□□□□ -0.39
CTDNEP1-207ENST00000572043 IGKV2-40A0A087WW87 121 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-207ENST00000572043 TRAV12-3A0A0B4J271 114 aa12.59□□□□□ -0.39
CTDNEP1-207ENST00000572043 OR7C2O60412 319 aa12.59□□□□□ -0.39
CTDNEP1-207ENST00000572043 PTTG1O95997 202 aa12.59□□□□□ -0.39
CTDNEP1-207ENST00000572043 IGKV2D-40P01614 121 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-207ENST00000572043 NBEAP1P0C6P0 100 aa12.59□□□□□ -0.39
CTDNEP1-207ENST00000572043 PDE6HQ13956 83 aa12.59□□□□□ -0.39
CTDNEP1-207ENST00000572043 RNF141Q8WVD5 230 aa12.58□□□□□ -0.4
CTDNEP1-207ENST00000572043 FXYD5Q96DB9 178 aa12.58□□□□□ -0.4
CTDNEP1-207ENST00000572043 NOP10Q9NPE3 64 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-207ENST00000572043 PRELID1Q9Y255 219 aa12.58□□□□□ -0.4
CTDNEP1-207ENST00000572043 F5H768 121 aa12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 P0DMU3 169 aa12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 FAM231AP0DMU4 169 aa12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 FAM231CP0DMU5 169 aa12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 UBE2DNLQ8IWF7 75 aa12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 CCDC28AQ8IWP9 274 aa12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 RNASE8Q8TDE3 154 aaKnown RBP12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 TMEM263Q8WUH6 116 aaKnown RBP12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 PHYHIPLQ96FC7 376 aa12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 ODF3Q96PU9 254 aa12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 C20orf144Q9BQM9 153 aa12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 AGPAT4-IT1Q9H0P7 198 aa12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 MED28Q9H204 178 aa12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
CTDNEP1-207ENST00000572043 POM121L12Q8N7R1 296 aa12.56□□□□□ -0.4
CTDNEP1-207ENST00000572043 ZNF503Q96F45 646 aa12.56□□□□□ -0.4
CTDNEP1-207ENST00000572043 FAM210BQ96KR6 192 aa12.56□□□□□ -0.4
CTDNEP1-207ENST00000572043 RANP62826 216 aaKnown RBP12.55□□□□□ -0.4
CTDNEP1-207ENST00000572043 UBE2L3P68036 154 aaKnown RBP12.55□□□□□ -0.4
CTDNEP1-207ENST00000572043 BTN1A1Q13410 526 aa12.55□□□□□ -0.4
CTDNEP1-207ENST00000572043 ZNF493Q6ZR52 646 aa12.55□□□□□ -0.4
CTDNEP1-207ENST00000572043 LINC00477Q96M19 166 aa12.55□□□□□ -0.4
CTDNEP1-207ENST00000572043 VGLL1Q99990 258 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms