RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 CACNG8Q8WXS5 425 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 C22orf15Q8WYQ4 148 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 CCL17Q92583 94 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 FRZBQ92765 325 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 TNFRSF14Q92956 283 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 RNASE6Q93091 150 aaKnown RBP2.59□□□□□ -1.99
UBR1-211ENST00000569971 SFRP2Q96HF1 295 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 TMEM101Q96IK0 257 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 MRPL32Q9BYC8 188 aaKnown RBP2.59□□□□□ -1.99
UBR1-211ENST00000569971 MRPL20Q9BYC9 149 aaKnown RBP2.59□□□□□ -1.99
UBR1-211ENST00000569971 TMEM106BQ9NUM4 274 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 KAAG1Q9UBP8 84 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 FUT9Q9Y231 359 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 WASHC3Q9Y3C0 194 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 LY96Q9Y6Y9 160 aa2.59□□□□□ -1.99
UBR1-211ENST00000569971 AGRNO00468 2067 aa2.59□□□□□ -2
UBR1-211ENST00000569971 MED13Q9UHV7 2174 aa2.59□□□□□ -2
UBR1-211ENST00000569971 ZNF407Q9C0G0 2248 aa2.58□□□□□ -2
UBR1-211ENST00000569971 CHD3Q12873 2000 aaKnown RBP2.58□□□□□ -2
UBR1-211ENST00000569971 TRBV9A0A0B4J1U6 114 aa2.58□□□□□ -2
UBR1-211ENST00000569971 A0A1W2PRE2 83 aa2.58□□□□□ -2
UBR1-211ENST00000569971 F6UB75 175 aa2.58□□□□□ -2
UBR1-211ENST00000569971 INS-IGF2F8WCM5 200 aa2.58□□□□□ -2
UBR1-211ENST00000569971 H0YJW9 148 aa2.58□□□□□ -2
UBR1-211ENST00000569971 CORTO00230 105 aa2.58□□□□□ -2
UBR1-211ENST00000569971 ENSAO43768 121 aaKnown RBP2.58□□□□□ -2
UBR1-211ENST00000569971 COX7A2P2O60397 106 aa2.58□□□□□ -2
UBR1-211ENST00000569971 OR7C2O60412 319 aa2.58□□□□□ -2
UBR1-211ENST00000569971 LY6G6DO95868 133 aa2.58□□□□□ -2
UBR1-211ENST00000569971 RBP4P02753 201 aa2.58□□□□□ -2
UBR1-211ENST00000569971 IGKV1-16P04430 117 aa2.58□□□□□ -2
UBR1-211ENST00000569971 LINC00869P0C866 280 aa2.58□□□□□ -2
UBR1-211ENST00000569971 C8orf88P0DMB2 117 aa2.58□□□□□ -2
UBR1-211ENST00000569971 RNASE2P10153 161 aaKnown RBP2.58□□□□□ -2
UBR1-211ENST00000569971 FABP4P15090 132 aa2.58□□□□□ -2
UBR1-211ENST00000569971 CCL3L1P16619 93 aa2.58□□□□□ -2
UBR1-211ENST00000569971 NPPCP23582 126 aa2.58□□□□□ -2
UBR1-211ENST00000569971 OR10J1P30954 320 aa2.58□□□□□ -2
UBR1-211ENST00000569971 LGALS7P47929 136 aa2.58□□□□□ -2
UBR1-211ENST00000569971 GNG4P50150 75 aa2.58□□□□□ -2
UBR1-211ENST00000569971 ZNF137PP52743 207 aa2.58□□□□□ -2
UBR1-211ENST00000569971 CTAG1AP78358 180 aa2.58□□□□□ -2
UBR1-211ENST00000569971 NDPQ00604 133 aa2.58□□□□□ -2
UBR1-211ENST00000569971 ZNF90Q03938 601 aa2.58□□□□□ -2
UBR1-211ENST00000569971 PSG5Q15238 335 aa2.58□□□□□ -2
UBR1-211ENST00000569971 RPEL1Q2QD12 228 aa2.58□□□□□ -2
UBR1-211ENST00000569971 COX19Q49B96 90 aa2.58□□□□□ -2
UBR1-211ENST00000569971 TMEM155Q4W5P6 130 aa2.58□□□□□ -2
UBR1-211ENST00000569971 COA6Q5JTJ3 125 aaKnown RBP2.58□□□□□ -2
UBR1-211ENST00000569971 ACTL10Q5JWF8 245 aa2.58□□□□□ -2
UBR1-211ENST00000569971 LINC00173Q6ZV60 143 aa2.58□□□□□ -2
UBR1-211ENST00000569971 OR10D4PQ8NGN7 298 aa2.58□□□□□ -2
UBR1-211ENST00000569971 OR1N2Q8NGR9 330 aa2.58□□□□□ -2
UBR1-211ENST00000569971 OR1P1Q8NH06 330 aa2.58□□□□□ -2
UBR1-211ENST00000569971 SGMS2Q8NHU3 365 aa2.58□□□□□ -2
UBR1-211ENST00000569971 ZNF596Q8TC21 504 aa2.58□□□□□ -2
UBR1-211ENST00000569971 PACRGQ96M98 296 aaPredicted RBP2.58□□□□□ -2
UBR1-211ENST00000569971 WFIKKN1Q96NZ8 548 aa2.58□□□□□ -2
UBR1-211ENST00000569971 NABP2Q9BQ15 211 aa2.58□□□□□ -2
UBR1-211ENST00000569971 TMEM133Q9H2Q1 129 aa2.58□□□□□ -2
UBR1-211ENST00000569971 ZNF430Q9H8G1 570 aaPredicted RBP2.58□□□□□ -2
UBR1-211ENST00000569971 RETNQ9HD89 108 aa2.58□□□□□ -2
UBR1-211ENST00000569971 NDUFA4L2Q9NRX3 87 aa2.58□□□□□ -2
UBR1-211ENST00000569971 GOLT1BQ9Y3E0 138 aa2.58□□□□□ -2
UBR1-211ENST00000569971 AMMECR1Q9Y4X0 333 aaPredicted RBP2.58□□□□□ -2
UBR1-211ENST00000569971 YTHDF2Q9Y5A9 579 aaKnown RBP2.58□□□□□ -2
UBR1-211ENST00000569971 SHANK1Q9Y566 2161 aa2.58□□□□□ -2
UBR1-211ENST00000569971 ZDBF2Q9HCK1 2354 aa2.58□□□□□ -2
UBR1-211ENST00000569971 GTF3C1Q12789 2109 aa2.57□□□□□ -2
UBR1-211ENST00000569971 FRYLO94915 3013 aa2.57□□□□□ -2
UBR1-211ENST00000569971 TCRBV4S1A1TA0A5B7 111 aa2.57□□□□□ -2
UBR1-211ENST00000569971 E7EQL1 145 aa2.57□□□□□ -2
UBR1-211ENST00000569971 TSTD3H0UI37 97 aa2.57□□□□□ -2
UBR1-211ENST00000569971 GATCO43716 136 aaKnown RBP2.57□□□□□ -2
UBR1-211ENST00000569971 FOXH1O75593 365 aa2.57□□□□□ -2
UBR1-211ENST00000569971 FSTL3O95633 263 aa2.57□□□□□ -2
UBR1-211ENST00000569971 MOSP00540 346 aa2.57□□□□□ -2
UBR1-211ENST00000569971 GCGP01275 180 aa2.57□□□□□ -2
UBR1-211ENST00000569971 MT-ND6P03923 174 aa2.57□□□□□ -2
UBR1-211ENST00000569971 SOD3P08294 240 aa2.57□□□□□ -2
UBR1-211ENST00000569971 OR5G3P0C626 314 aa2.57□□□□□ -2
UBR1-211ENST00000569971 IGHV1-8P0DP01 117 aa2.57□□□□□ -2
UBR1-211ENST00000569971 DEFA4P12838 97 aa2.57□□□□□ -2
UBR1-211ENST00000569971 LOXP28300 417 aaPredicted RBP2.57□□□□□ -2
UBR1-211ENST00000569971 CEACAM3P40198 252 aa2.57□□□□□ -2
UBR1-211ENST00000569971 RPL27AP46776 148 aaKnown RBP2.57□□□□□ -2
UBR1-211ENST00000569971 REG1BP48304 166 aa2.57□□□□□ -2
UBR1-211ENST00000569971 PPOXP50336 477 aa2.57□□□□□ -2
UBR1-211ENST00000569971 PKIAP61925 76 aa2.57□□□□□ -2
UBR1-211ENST00000569971 UBE2L3P68036 154 aaKnown RBP2.57□□□□□ -2
UBR1-211ENST00000569971 DEFA6Q01524 100 aa2.57□□□□□ -2
UBR1-211ENST00000569971 CLEC12BQ2HXU8 276 aa2.57□□□□□ -2
UBR1-211ENST00000569971 FBXL19-AS1Q494R0 122 aa2.57□□□□□ -2
UBR1-211ENST00000569971 PDZD11Q5EBL8 140 aa2.57□□□□□ -2
UBR1-211ENST00000569971 CENPWQ5EE01 88 aa2.57□□□□□ -2
UBR1-211ENST00000569971 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
UBR1-211ENST00000569971 C10orf113Q5VZT2 155 aa2.57□□□□□ -2
UBR1-211ENST00000569971 SPATA31B1PQ5VZV4 182 aa2.57□□□□□ -2
UBR1-211ENST00000569971 LYPD2Q6UXB3 125 aa2.57□□□□□ -2
UBR1-211ENST00000569971 MIR17HGQ75NE6 70 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms