RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 LYPD1Q8N2G4 141 aa11.04□□□□□ -0.64
SPG7-213ENST00000566221 CITED4Q96RK1 184 aa11.04□□□□□ -0.64
SPG7-213ENST00000566221 TMPRSS5Q9H3S3 457 aa11.04□□□□□ -0.64
SPG7-213ENST00000566221 MAP6D1Q9H9H5 199 aa11.04□□□□□ -0.64
SPG7-213ENST00000566221 OR11H12B2RN74 326 aa11.03□□□□□ -0.64
SPG7-213ENST00000566221 KRBOX1C9JBD0 128 aa11.03□□□□□ -0.64
SPG7-213ENST00000566221 CD7P09564 240 aa11.03□□□□□ -0.64
SPG7-213ENST00000566221 MEF2BQ02080 365 aaPredicted RBP11.03□□□□□ -0.64
SPG7-213ENST00000566221 HAGHQ16775 308 aa11.03□□□□□ -0.64
SPG7-213ENST00000566221 PSMG4Q5JS54 123 aa11.03□□□□□ -0.64
SPG7-213ENST00000566221 TOR2AQ5JU69 321 aa11.03□□□□□ -0.64
SPG7-213ENST00000566221 PRR25Q96S07 402 aa11.03□□□□□ -0.64
SPG7-213ENST00000566221 TREM1Q9NP99 234 aa11.03□□□□□ -0.64
SPG7-213ENST00000566221 PRELID1Q9Y255 219 aa11.03□□□□□ -0.64
SPG7-213ENST00000566221 AGRNO00468 2067 aa11.03□□□□□ -0.64
SPG7-213ENST00000566221 PDE6DO43924 150 aa11.02□□□□□ -0.65
SPG7-213ENST00000566221 PAGE4O60829 102 aa11.02□□□□□ -0.65
SPG7-213ENST00000566221 RANP62826 216 aaKnown RBP11.02□□□□□ -0.65
SPG7-213ENST00000566221 ICAM4Q14773 271 aa11.02□□□□□ -0.65
SPG7-213ENST00000566221 PSG3Q16557 428 aa11.02□□□□□ -0.65
SPG7-213ENST00000566221 RNF182Q8N6D2 247 aa11.02□□□□□ -0.65
SPG7-213ENST00000566221 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.65
SPG7-213ENST00000566221 LINC00052Q96N35 136 aa11.02□□□□□ -0.65
SPG7-213ENST00000566221 SLC35B3Q9H1N7 401 aa11.02□□□□□ -0.65
SPG7-213ENST00000566221 Q9H3A6 140 aa11.02□□□□□ -0.65
SPG7-213ENST00000566221 OTORQ9NRC9 128 aa11.02□□□□□ -0.65
SPG7-213ENST00000566221 TMEM218A2RU14 115 aa11.01□□□□□ -0.65
SPG7-213ENST00000566221 FAM74A7A6NL05 159 aa11.01□□□□□ -0.65
SPG7-213ENST00000566221 F6UZH7 168 aa11.01□□□□□ -0.65
SPG7-213ENST00000566221 TMEM250H0YL14 139 aa11.01□□□□□ -0.65
SPG7-213ENST00000566221 DEFB131AP59861 70 aa11.01□□□□□ -0.65
SPG7-213ENST00000566221 CST9LP1Q5W188 147 aa11.01□□□□□ -0.65
SPG7-213ENST00000566221 IGFL4Q6B9Z1 124 aa11.01□□□□□ -0.65
SPG7-213ENST00000566221 EXOC3-AS1Q8N2X6 119 aa11.01□□□□□ -0.65
SPG7-213ENST00000566221 ZNF738Q8NE65 137 aa11.01□□□□□ -0.65
SPG7-213ENST00000566221 C20orf173Q96LM9 149 aa11.01□□□□□ -0.65
SPG7-213ENST00000566221 RARRES2Q99969 163 aa11.01□□□□□ -0.65
SPG7-213ENST00000566221 DNAH3Q8TD57 4116 aa11□□□□□ -0.65
SPG7-213ENST00000566221 C11orf94C9JXX5 98 aa11□□□□□ -0.65
SPG7-213ENST00000566221 ATP6V1G1O75348 118 aa11□□□□□ -0.65
SPG7-213ENST00000566221 HLA-DMBP28068 263 aa11□□□□□ -0.65
SPG7-213ENST00000566221 UBE2G2P60604 165 aa11□□□□□ -0.65
SPG7-213ENST00000566221 ARL6IP6Q8N6S5 226 aa11□□□□□ -0.65
SPG7-213ENST00000566221 RXFP4Q8TDU9 374 aa11□□□□□ -0.65
SPG7-213ENST00000566221 RPUSD4Q96CM3 377 aaKnown RBP11□□□□□ -0.65
SPG7-213ENST00000566221 C19orf73Q9NVV2 129 aa11□□□□□ -0.65
SPG7-213ENST00000566221 YTHDF2Q9Y5A9 579 aaKnown RBP11□□□□□ -0.65
SPG7-213ENST00000566221 GGTLC3B5MD39 225 aa10.99□□□□□ -0.65
SPG7-213ENST00000566221 SRP19P09132 144 aaKnown RBP10.99□□□□□ -0.65
SPG7-213ENST00000566221 SRSF3P84103 164 aaKnown RBP10.99□□□□□ -0.65
SPG7-213ENST00000566221 CCDC28AQ8IWP9 274 aa10.99□□□□□ -0.65
SPG7-213ENST00000566221 C5orf17Q8NAS9 161 aa10.99□□□□□ -0.65
SPG7-213ENST00000566221 CMTM2Q8TAZ6 248 aa10.99□□□□□ -0.65
SPG7-213ENST00000566221 PGPA6NDG6 321 aa10.98□□□□□ -0.65
SPG7-213ENST00000566221 M0R3E3 92 aa10.98□□□□□ -0.65
SPG7-213ENST00000566221 CSN1S1P47710 185 aa10.98□□□□□ -0.65
SPG7-213ENST00000566221 FAM74A3Q4VXF1 159 aa10.98□□□□□ -0.65
SPG7-213ENST00000566221 FOXI2Q6ZQN5 318 aa10.98□□□□□ -0.65
SPG7-213ENST00000566221 APRG1Q8IVJ8 170 aa10.98□□□□□ -0.65
SPG7-213ENST00000566221 Q8N1Y9 231 aa10.98□□□□□ -0.65
SPG7-213ENST00000566221 SEC11CQ9BY50 192 aa10.98□□□□□ -0.65
SPG7-213ENST00000566221 WFDC10AQ9H1F0 79 aa10.98□□□□□ -0.65
SPG7-213ENST00000566221 SAV1Q9H4B6 383 aaPredicted RBP10.98□□□□□ -0.65
SPG7-213ENST00000566221 ZNF705FA8MVS1 300 aaPredicted RBP10.97□□□□□ -0.65
SPG7-213ENST00000566221 SLC25A5P05141 298 aaKnown RBP10.97□□□□□ -0.65
SPG7-213ENST00000566221 SFTA3P0C7M3 94 aa10.97□□□□□ -0.65
SPG7-213ENST00000566221 SUMO1P63165 101 aaKnown RBP10.97□□□□□ -0.65
SPG7-213ENST00000566221 SOHLH1Q5JUK2 328 aa10.97□□□□□ -0.65
SPG7-213ENST00000566221 C10orf91Q5T1B1 145 aa10.97□□□□□ -0.65
SPG7-213ENST00000566221 EBLN2Q6P2I7 272 aa10.97□□□□□ -0.65
SPG7-213ENST00000566221 DEFB125Q8N687 156 aa10.97□□□□□ -0.65
SPG7-213ENST00000566221 HIST1H2BAQ96A08 127 aa10.97□□□□□ -0.65
SPG7-213ENST00000566221 AURKAIP1Q9NWT8 199 aaPredicted RBP10.97□□□□□ -0.65
SPG7-213ENST00000566221 A0A0J9YX75 114 aa10.96□□□□□ -0.65
SPG7-213ENST00000566221 C9JQL5 133 aa10.96□□□□□ -0.65
SPG7-213ENST00000566221 HLA-DRB4P13762 266 aa10.96□□□□□ -0.65
SPG7-213ENST00000566221 ZNF124Q15973 351 aa10.96□□□□□ -0.65
SPG7-213ENST00000566221 ACTL10Q5JWF8 245 aa10.96□□□□□ -0.65
SPG7-213ENST00000566221 OR10J6PQ8NGY7 276 aa10.96□□□□□ -0.65
SPG7-213ENST00000566221 C11orf52Q96A22 123 aa10.96□□□□□ -0.65
SPG7-213ENST00000566221 SRD5A3Q9H8P0 318 aa10.96□□□□□ -0.65
SPG7-213ENST00000566221 HLA-DRB4X5D2U9 266 aa10.96□□□□□ -0.65
SPG7-213ENST00000566221 SERTM2A0A1B0GWG4 89 aa10.95□□□□□ -0.66
SPG7-213ENST00000566221 KNCNA6PVL3 124 aa10.95□□□□□ -0.66
SPG7-213ENST00000566221 F6UB75 175 aa10.95□□□□□ -0.66
SPG7-213ENST00000566221 S100A9P06702 114 aaKnown RBP10.95□□□□□ -0.66
SPG7-213ENST00000566221 ATP5G3P48201 142 aa10.95□□□□□ -0.66
SPG7-213ENST00000566221 DEFB1P60022 68 aa10.95□□□□□ -0.66
SPG7-213ENST00000566221 STHQ8IWL8 128 aa10.95□□□□□ -0.66
SPG7-213ENST00000566221 OR8A1Q8NGG7 326 aa10.95□□□□□ -0.66
SPG7-213ENST00000566221 RPH3ALQ9UNE2 315 aa10.95□□□□□ -0.66
SPG7-213ENST00000566221 CARHSP1Q9Y2V2 147 aaKnown RBP10.95□□□□□ -0.66
SPG7-213ENST00000566221 RBAKDNA6NC62 111 aa10.94□□□□□ -0.66
SPG7-213ENST00000566221 DIRC3C9JPN6 131 aa10.94□□□□□ -0.66
SPG7-213ENST00000566221 PRAC2D3DTV9 90 aa10.94□□□□□ -0.66
SPG7-213ENST00000566221 F8W036 122 aa10.94□□□□□ -0.66
SPG7-213ENST00000566221 DUSP14O95147 198 aaKnown RBP10.94□□□□□ -0.66
SPG7-213ENST00000566221 PRB2P02812 416 aaPredicted RBP10.94□□□□□ -0.66
SPG7-213ENST00000566221 GNG5P63218 68 aa10.94□□□□□ -0.66
SPG7-213ENST00000566221 HIST1H1AQ02539 215 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms