RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 OR5C1Q8NGR4 320 aa13.15□□□□□ -0.3
CLN6-204ENST00000564752 CHAC2Q8WUX2 184 aa13.15□□□□□ -0.3
CLN6-204ENST00000564752 NIPSNAP3BQ9BS92 247 aa13.15□□□□□ -0.3
CLN6-204ENST00000564752 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.3
CLN6-204ENST00000564752 SLC17A3O00476 420 aa13.14□□□□□ -0.31
CLN6-204ENST00000564752 CRXO43186 299 aaPredicted RBP13.14□□□□□ -0.31
CLN6-204ENST00000564752 PRB4P10163 310 aaPredicted RBP13.14□□□□□ -0.31
CLN6-204ENST00000564752 NHLH2Q02577 135 aa13.14□□□□□ -0.31
CLN6-204ENST00000564752 OXA1LQ15070 435 aa13.14□□□□□ -0.31
CLN6-204ENST00000564752 THAP6Q8TBB0 222 aa13.14□□□□□ -0.31
CLN6-204ENST00000564752 NPCDR1Q9BY65 106 aa13.14□□□□□ -0.31
CLN6-204ENST00000564752 YTHDF2Q9Y5A9 579 aaKnown RBP13.14□□□□□ -0.31
CLN6-204ENST00000564752 PKD1P98161 4303 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 TRAV12-2A0A075B6T6 113 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 TRAV5A0A0B4J249 113 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 H0YIZ8 118 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 H3BQ15 152 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 M0R2N4 97 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 RTL8CO15255 209 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 H2BFSP57053 126 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 CLINT1Q14677 625 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 GUK1Q16774 197 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 LGALS9BQ3B8N2 356 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 RYR1P21817 5038 aa13.13□□□□□ -0.31
CLN6-204ENST00000564752 PET100P0DJ07 73 aa13.12□□□□□ -0.31
CLN6-204ENST00000564752 PPP1R1CQ8WVI7 109 aa13.12□□□□□ -0.31
CLN6-204ENST00000564752 OR10J6PQ8NGY7 276 aa13.11□□□□□ -0.31
CLN6-204ENST00000564752 KCNIP2Q9NS61 270 aa13.11□□□□□ -0.31
CLN6-204ENST00000564752 PRSS29PA6NIE9 313 aa13.1□□□□□ -0.31
CLN6-204ENST00000564752 ZNF705GA8MUZ8 300 aaPredicted RBP13.1□□□□□ -0.31
CLN6-204ENST00000564752 CDKN1BP46527 198 aa13.1□□□□□ -0.31
CLN6-204ENST00000564752 TMEM256Q8N2U0 113 aa13.1□□□□□ -0.31
CLN6-204ENST00000564752 SAT2Q96F10 170 aaPredicted RBP13.1□□□□□ -0.31
CLN6-204ENST00000564752 ZNF586Q9NXT0 402 aa13.1□□□□□ -0.31
CLN6-204ENST00000564752 PRAC2D3DTV9 90 aa13.09□□□□□ -0.31
CLN6-204ENST00000564752 ZNF253O75346 499 aa13.09□□□□□ -0.31
CLN6-204ENST00000564752 HTN3P15516 51 aa13.09□□□□□ -0.31
CLN6-204ENST00000564752 GCSAMLQ5JQS6 135 aa13.09□□□□□ -0.31
CLN6-204ENST00000564752 UBE2DNLQ8IWF7 75 aa13.09□□□□□ -0.31
CLN6-204ENST00000564752 WDR61Q9GZS3 305 aaKnown RBP13.09□□□□□ -0.31
CLN6-204ENST00000564752 TMEM14CQ9P0S9 112 aa13.09□□□□□ -0.31
CLN6-204ENST00000564752 MPC2O95563 127 aa13.08□□□□□ -0.32
CLN6-204ENST00000564752 DAD1P61803 113 aa13.08□□□□□ -0.32
CLN6-204ENST00000564752 RNF212Q495C1 297 aa13.08□□□□□ -0.32
CLN6-204ENST00000564752 Q6ZR54 194 aa13.08□□□□□ -0.32
CLN6-204ENST00000564752 LINC01587Q99440 93 aa13.08□□□□□ -0.32
CLN6-204ENST00000564752 TRBV19A0A075B6N1 114 aa13.07□□□□□ -0.32
CLN6-204ENST00000564752 C17orf112F2Z3M2 114 aa13.07□□□□□ -0.32
CLN6-204ENST00000564752 PRM2P04554 102 aa13.07□□□□□ -0.32
CLN6-204ENST00000564752 PYYP10082 97 aa13.07□□□□□ -0.32
CLN6-204ENST00000564752 HIST1H1EP10412 219 aaKnown RBP13.07□□□□□ -0.32
CLN6-204ENST00000564752 TSPOP30536 169 aa13.07□□□□□ -0.32
CLN6-204ENST00000564752 ATP5SQ99766 215 aa13.07□□□□□ -0.32
CLN6-204ENST00000564752 HSPB11Q9Y547 144 aa13.07□□□□□ -0.32
CLN6-204ENST00000564752 TIMM9Q9Y5J7 89 aa13.07□□□□□ -0.32
CLN6-204ENST00000564752 IGLV2-18A0A075B6J9 118 aa13.06□□□□□ -0.32
CLN6-204ENST00000564752 TAS2R60P59551 318 aa13.06□□□□□ -0.32
CLN6-204ENST00000564752 PDE6HQ13956 83 aa13.06□□□□□ -0.32
CLN6-204ENST00000564752 TMEM88Q6PEY1 159 aa13.06□□□□□ -0.32
CLN6-204ENST00000564752 MRPL53Q96EL3 112 aaKnown RBP13.06□□□□□ -0.32
CLN6-204ENST00000564752 SLC25A2Q9BXI2 301 aa13.06□□□□□ -0.32
CLN6-204ENST00000564752 PARD6GQ9BYG4 376 aaPredicted RBP13.06□□□□□ -0.32
CLN6-204ENST00000564752 MBD2Q9UBB5 411 aa13.06□□□□□ -0.32
CLN6-204ENST00000564752 LYRM9A8MSI8 78 aa13.05□□□□□ -0.32
CLN6-204ENST00000564752 MED14OSP0DP75 135 aa13.05□□□□□ -0.32
CLN6-204ENST00000564752 HTN1P15515 57 aa13.05□□□□□ -0.32
CLN6-204ENST00000564752 MIR17HGQ75NE6 70 aa13.05□□□□□ -0.32
CLN6-204ENST00000564752 BLNKQ8WV28 456 aa13.05□□□□□ -0.32
CLN6-204ENST00000564752 C16orf74Q96GX8 76 aa13.05□□□□□ -0.32
CLN6-204ENST00000564752 C20orf144Q9BQM9 153 aa13.05□□□□□ -0.32
CLN6-204ENST00000564752 MRPL32Q9BYC8 188 aaKnown RBP13.05□□□□□ -0.32
CLN6-204ENST00000564752 NPIPB6E9PJ23 425 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 H7BYZ3 331 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 M0R3E3 92 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 PTTG1O95997 202 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 AZU1P20160 251 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 RPL12P30050 165 aaKnown RBP13.04□□□□□ -0.32
CLN6-204ENST00000564752 LEPP41159 167 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 GFI1BQ5VTD9 330 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 ODF3Q96PU9 254 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 SMIM3Q9BZL3 60 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 AAMDCQ9H7C9 122 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 PRELID1Q9Y255 219 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 ALG5Q9Y673 324 aa13.04□□□□□ -0.32
CLN6-204ENST00000564752 MUC4Q99102 2169 aa13.03□□□□□ -0.32
CLN6-204ENST00000564752 J3KRW8 73 aa13.03□□□□□ -0.32
CLN6-204ENST00000564752 NDUFB4O95168 129 aa13.03□□□□□ -0.32
CLN6-204ENST00000564752 IFNA5P01569 189 aa13.03□□□□□ -0.32
CLN6-204ENST00000564752 KIR3DS1Q14943 382 aa13.03□□□□□ -0.32
CLN6-204ENST00000564752 FAM167A-AS1Q96KT0 104 aa13.03□□□□□ -0.32
CLN6-204ENST00000564752 PLAC8L1A1L4L8 177 aa13.02□□□□□ -0.33
CLN6-204ENST00000564752 CT45A10P0DMU9 189 aa13.02□□□□□ -0.33
CLN6-204ENST00000564752 DEFB130BP0DP73 79 aa13.02□□□□□ -0.33
CLN6-204ENST00000564752 DEFB130AP0DP74 79 aa13.02□□□□□ -0.33
CLN6-204ENST00000564752 EXOC3-AS1Q8N2X6 119 aa13.02□□□□□ -0.33
CLN6-204ENST00000564752 C15orf53Q8NAA6 179 aa13.02□□□□□ -0.33
CLN6-204ENST00000564752 SCGB1C1Q8TD33 95 aa13.02□□□□□ -0.33
CLN6-204ENST00000564752 TMEM263Q8WUH6 116 aaKnown RBP13.02□□□□□ -0.33
CLN6-204ENST00000564752 OR51M1Q9H341 326 aa13.02□□□□□ -0.33
CLN6-204ENST00000564752 FUT9Q9Y231 359 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms