RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CD81P60033 236 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 UBE2G2P60604 165 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 ICAM4Q14773 271 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 ZNF124Q15973 351 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 PSG3Q16557 428 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 FAM210AQ96ND0 272 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 SLC50A1Q9BRV3 221 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 SSBP4Q9BWG4 385 aaPredicted RBP6.96□□□□□ -1.3
HERC1-206ENST00000559996 ARL2-SNX15V9GYD0 113 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 LOC102723971A0A1B0GUV8 181 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 LINC00862A6NCI5 91 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 RBFOX3A6NFN3 312 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 DNASE2O00115 360 aaPredicted RBP6.95□□□□□ -1.3
HERC1-206ENST00000559996 PSG9Q00887 426 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 HAGHQ16775 308 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 ZNF506Q5JVG8 444 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 KPRPQ5T749 579 aaPredicted RBP6.95□□□□□ -1.3
HERC1-206ENST00000559996 GDF5OSQ5U4N7 250 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 LCN12Q6JVE5 192 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 C16orf92Q96LL3 132 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 FAM110AQ9BQ89 295 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 MAP6D1Q9H9H5 199 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 OTORQ9NRC9 128 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 MED9Q9NWA0 146 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 GNG13Q9P2W3 67 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 AGRNO00468 2067 aa6.95□□□□□ -1.3
HERC1-206ENST00000559996 DIRC3C9JPN6 131 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 F6UB75 175 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 IGLV2-11P01706 119 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 ZNF688P0C7X2 276 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 BCL2P10415 239 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 PPT1P50897 306 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 DEFB131AP59861 70 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 GNG5P63218 68 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 PAFAH1B2P68402 229 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 GUCA2BQ16661 112 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 IQCF2Q8IXL9 164 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 ARL6IP6Q8N6S5 226 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 MRPL53Q96EL3 112 aaKnown RBP6.94□□□□□ -1.3
HERC1-206ENST00000559996 LINC00479Q96M42 142 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 WFDC10AQ9H1F0 79 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 MANBALQ9NQG1 85 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 EPDR1Q9UM22 224 aa6.94□□□□□ -1.3
HERC1-206ENST00000559996 OR4C46A6NHA9 309 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 A8MTW9 85 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 C11orf94C9JXX5 98 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 SRP19P09132 144 aaKnown RBP6.93□□□□□ -1.3
HERC1-206ENST00000559996 ZNF705DP0CH99 300 aaPredicted RBP6.93□□□□□ -1.3
HERC1-206ENST00000559996 ZNF705BP0CI00 300 aaPredicted RBP6.93□□□□□ -1.3
HERC1-206ENST00000559996 RAB14P61106 215 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 PSMG4Q5JS54 123 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 APRG1Q8IVJ8 170 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 RXFP4Q8TDU9 374 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 C2CD4CQ8TF44 421 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 LINC00052Q96N35 136 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 VGLL1Q99990 258 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 NKX6-2Q9C056 277 aaPredicted RBP6.93□□□□□ -1.3
HERC1-206ENST00000559996 CLEC5AQ9NY25 188 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 VAX2Q9UIW0 290 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 PRELID1Q9Y255 219 aa6.93□□□□□ -1.3
HERC1-206ENST00000559996 A0A0J9YX75 114 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 RAB19A4D1S5 217 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 KNCNA6PVL3 124 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 NDUFS6O75380 124 aaKnown RBP6.92□□□□□ -1.3
HERC1-206ENST00000559996 TCRAP04437 139 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 SLC25A5P05141 298 aaKnown RBP6.92□□□□□ -1.3
HERC1-206ENST00000559996 ID1P41134 155 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 MEF2BQ02080 365 aaPredicted RBP6.92□□□□□ -1.3
HERC1-206ENST00000559996 ERCC8Q13216 396 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 TOR2AQ5JU69 321 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 CST9LP1Q5W188 147 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 EIF4E3Q8N5X7 224 aaKnown RBP6.92□□□□□ -1.3
HERC1-206ENST00000559996 C5orf17Q8NAS9 161 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 C11orf52Q96A22 123 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 RPUSD4Q96CM3 377 aaKnown RBP6.92□□□□□ -1.3
HERC1-206ENST00000559996 TVP23CQ96ET8 276 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 FAM19A4Q96LR4 140 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 PRR25Q96S07 402 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 TXNDC17Q9BRA2 123 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 GPR61Q9BZJ8 451 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 AGPAT4-IT1Q9H0P7 198 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 SAV1Q9H4B6 383 aaPredicted RBP6.92□□□□□ -1.3
HERC1-206ENST00000559996 KLF12Q9Y4X4 402 aa6.92□□□□□ -1.3
HERC1-206ENST00000559996 IGKV2-40A0A087WW87 121 aaPredicted RBP6.91□□□□□ -1.3
HERC1-206ENST00000559996 RBAKDNA6NC62 111 aa6.91□□□□□ -1.3
HERC1-206ENST00000559996 RBMY1BA6NDE4 496 aaKnown RBP6.91□□□□□ -1.3
HERC1-206ENST00000559996 RBMY1EA6NEQ0 496 aaKnown RBP6.91□□□□□ -1.3
HERC1-206ENST00000559996 H3BMM0 161 aa6.91□□□□□ -1.3
HERC1-206ENST00000559996 IGKV2D-40P01614 121 aaPredicted RBP6.91□□□□□ -1.3
HERC1-206ENST00000559996 RBMY1DP0C7P1 496 aaKnown RBP6.91□□□□□ -1.3
HERC1-206ENST00000559996 SNRPD3P62318 126 aaKnown RBP6.91□□□□□ -1.3
HERC1-206ENST00000559996 SAMD13Q5VXD3 122 aa6.91□□□□□ -1.3
HERC1-206ENST00000559996 AMTNQ6UX39 209 aa6.91□□□□□ -1.3
HERC1-206ENST00000559996 LINC00322Q6ZN03 302 aaPredicted RBP6.91□□□□□ -1.3
HERC1-206ENST00000559996 C9orf47Q6ZRZ4 202 aa6.91□□□□□ -1.3
HERC1-206ENST00000559996 DEFB125Q8N687 156 aa6.91□□□□□ -1.3
HERC1-206ENST00000559996 OR8A1Q8NGG7 326 aa6.91□□□□□ -1.3
HERC1-206ENST00000559996 AAMDCQ9H7C9 122 aa6.91□□□□□ -1.3
HERC1-206ENST00000559996 PPP1R14DQ9NXH3 145 aa6.91□□□□□ -1.3
HERC1-206ENST00000559996 TRAV8-1A0A0A6YYK1 113 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms