RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 SCRT2Q9NQ03 307 aa12.93□□□□□ -0.34
PBX1-215ENST00000559240 SPANXB1Q9NS25 103 aaPredicted RBP12.93□□□□□ -0.34
PBX1-215ENST00000559240 FAM106CPP0CH98 169 aa12.93□□□□□ -0.34
PBX1-215ENST00000559240 TCL1AP56279 114 aa12.93□□□□□ -0.34
PBX1-215ENST00000559240 SEC11AP67812 179 aa12.93□□□□□ -0.34
PBX1-215ENST00000559240 MRPL54Q6P161 138 aaKnown RBP12.93□□□□□ -0.34
PBX1-215ENST00000559240 ACSM6Q6P461 480 aa12.93□□□□□ -0.34
PBX1-215ENST00000559240 ARPC1AQ92747 370 aa12.93□□□□□ -0.34
PBX1-215ENST00000559240 IL36BQ9NZH7 164 aa12.93□□□□□ -0.34
PBX1-215ENST00000559240 MRGPRG-AS1Q2M3A8 158 aa12.92□□□□□ -0.34
PBX1-215ENST00000559240 C2orf91Q6ZV80 131 aa12.92□□□□□ -0.34
PBX1-215ENST00000559240 RAB40CQ96S21 281 aa12.92□□□□□ -0.34
PBX1-215ENST00000559240 FABP2P12104 132 aa12.92□□□□□ -0.34
PBX1-215ENST00000559240 RUSC1-AS1Q66K80 236 aa12.92□□□□□ -0.34
PBX1-215ENST00000559240 FOXI2Q6ZQN5 318 aa12.92□□□□□ -0.34
PBX1-215ENST00000559240 LINC00173Q6ZV60 143 aa12.92□□□□□ -0.34
PBX1-215ENST00000559240 OR4A16Q8NH70 328 aa12.92□□□□□ -0.34
PBX1-215ENST00000559240 OCC1Q8TAD7 63 aa12.92□□□□□ -0.34
PBX1-215ENST00000559240 A0A1W2PRD5 423 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 A0A1W2PRF3 423 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 A0A1W2PRM7 423 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 TCTAP57738 103 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 IZUMO4Q1ZYL8 232 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 TMEM70Q9BUB7 260 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 UBE2L5PA0A1B0GUS4 154 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 MMD2Q8IY49 270 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 SIGLEC9Q9Y336 463 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 A6NDN8 102 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 RRHO14718 337 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 NBR2O15453 112 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 IAPPP10997 89 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 BPIFA4PQ86YQ2 179 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 VKORC1L1Q8N0U8 176 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 RITA1Q96K30 269 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 VPREB3Q9UKI3 123 aa12.91□□□□□ -0.34
PBX1-215ENST00000559240 IGHV3-72A0A0B4J1Y9 119 aa12.9□□□□□ -0.34
PBX1-215ENST00000559240 SYNGR2O43760 224 aa12.9□□□□□ -0.34
PBX1-215ENST00000559240 HSPE1P61604 102 aaKnown RBP12.9□□□□□ -0.34
PBX1-215ENST00000559240 LRRC75BQ2VPJ9 315 aa12.9□□□□□ -0.34
PBX1-215ENST00000559240 C18orf32Q8TCD1 76 aa12.9□□□□□ -0.34
PBX1-215ENST00000559240 PIFOQ8TCI5 191 aa12.9□□□□□ -0.34
PBX1-215ENST00000559240 GNB1LQ9BYB4 327 aa12.9□□□□□ -0.34
PBX1-215ENST00000559240 FCGR2BP31994 310 aaPredicted RBP12.9□□□□□ -0.34
PBX1-215ENST00000559240 RPL8P62917 257 aaKnown RBP12.9□□□□□ -0.34
PBX1-215ENST00000559240 C1RLQ9NZP8 487 aa12.9□□□□□ -0.34
PBX1-215ENST00000559240 CSMD2Q7Z408 3487 aa12.9□□□□□ -0.35
PBX1-215ENST00000559240 ATP5IP56385 69 aaPredicted RBP12.89□□□□□ -0.35
PBX1-215ENST00000559240 BRD3OSQ6XYD6 125 aa12.89□□□□□ -0.35
PBX1-215ENST00000559240 TMEM136Q6ZRR5 245 aa12.89□□□□□ -0.35
PBX1-215ENST00000559240 TRAV3A0A0B4J244 114 aa12.89□□□□□ -0.35
PBX1-215ENST00000559240 GNG4P50150 75 aa12.89□□□□□ -0.35
PBX1-215ENST00000559240 SERF2P84101 59 aa12.89□□□□□ -0.35
PBX1-215ENST00000559240 PRCDQ00LT1 54 aa12.89□□□□□ -0.35
PBX1-215ENST00000559240 ITPR2Q14571 2701 aa12.89□□□□□ -0.35
PBX1-215ENST00000559240 VDAC2P45880 294 aaPredicted RBP12.88□□□□□ -0.35
PBX1-215ENST00000559240 RPEL1Q2QD12 228 aa12.88□□□□□ -0.35
PBX1-215ENST00000559240 PPP1R27Q86WC6 154 aa12.88□□□□□ -0.35
PBX1-215ENST00000559240 TIGITQ495A1 244 aa12.88□□□□□ -0.35
PBX1-215ENST00000559240 TM4SF20Q53R12 229 aa12.88□□□□□ -0.35
PBX1-215ENST00000559240 OR4C12Q96R67 309 aa12.88□□□□□ -0.35
PBX1-215ENST00000559240 NDUFA4L2Q9NRX3 87 aa12.88□□□□□ -0.35
PBX1-215ENST00000559240 TCF19Q9Y242 345 aa12.88□□□□□ -0.35
PBX1-215ENST00000559240 AKAP9Q99996 3911 aa12.88□□□□□ -0.35
PBX1-215ENST00000559240 TMUB1Q9BVT8 246 aa12.87□□□□□ -0.35
PBX1-215ENST00000559240 TEX50A0A1B0GTY4 177 aa12.87□□□□□ -0.35
PBX1-215ENST00000559240 A6NDX4 124 aa12.87□□□□□ -0.35
PBX1-215ENST00000559240 SMAD7O15105 426 aaKnown RBP12.87□□□□□ -0.35
PBX1-215ENST00000559240 SAMD5Q5TGI4 173 aa12.87□□□□□ -0.35
PBX1-215ENST00000559240 TMEM116Q8NCL8 245 aa12.87□□□□□ -0.35
PBX1-215ENST00000559240 OR10G9Q8NGN4 311 aa12.87□□□□□ -0.35
PBX1-215ENST00000559240 OR10G7Q8NGN6 311 aa12.87□□□□□ -0.35
PBX1-215ENST00000559240 OR1L8Q8NGR8 309 aa12.87□□□□□ -0.35
PBX1-215ENST00000559240 HECTD1Q9ULT8 2610 aa12.87□□□□□ -0.35
PBX1-215ENST00000559240 K7EN84 100 aa12.87□□□□□ -0.35
PBX1-215ENST00000559240 TECRQ9NZ01 308 aaKnown RBP12.87□□□□□ -0.35
PBX1-215ENST00000559240 TIMM8BQ9Y5J9 83 aaPredicted RBP12.87□□□□□ -0.35
PBX1-215ENST00000559240 ITPR3Q14573 2671 aa12.86□□□□□ -0.35
PBX1-215ENST00000559240 VPS13CQ709C8 3753 aa12.86□□□□□ -0.35
PBX1-215ENST00000559240 CNTFRP26992 372 aa12.86□□□□□ -0.35
PBX1-215ENST00000559240 FAM120AOSQ5T036 256 aa12.86□□□□□ -0.35
PBX1-215ENST00000559240 IGHV3OR16-10A0A075B7F0 116 aa12.86□□□□□ -0.35
PBX1-215ENST00000559240 CTXND1A0A1B0GTU2 59 aa12.86□□□□□ -0.35
PBX1-215ENST00000559240 HLA-DRB1P01911 266 aa12.86□□□□□ -0.35
PBX1-215ENST00000559240 Q8N9W7 124 aa12.86□□□□□ -0.35
PBX1-215ENST00000559240 SYT8Q8NBV8 401 aa12.86□□□□□ -0.35
PBX1-215ENST00000559240 CCDC179H3BU77 68 aa12.85□□□□□ -0.35
PBX1-215ENST00000559240 Q6YL49 198 aa12.85□□□□□ -0.35
PBX1-215ENST00000559240 VCX2Q9H322 139 aa12.85□□□□□ -0.35
PBX1-215ENST00000559240 CYSLTR1Q9Y271 337 aa12.85□□□□□ -0.35
PBX1-215ENST00000559240 XGP55808 180 aa12.85□□□□□ -0.35
PBX1-215ENST00000559240 FXYD3Q14802 87 aa12.85□□□□□ -0.35
PBX1-215ENST00000559240 VWC2Q2TAL6 325 aa12.85□□□□□ -0.35
PBX1-215ENST00000559240 PVRIGQ6DKI7 326 aa12.85□□□□□ -0.35
PBX1-215ENST00000559240 TMEM86BQ8N661 226 aa12.85□□□□□ -0.35
PBX1-215ENST00000559240 TAF15Q92804 592 aaKnown RBP eCLIP12.85□□□□□ -0.35
PBX1-215ENST00000559240 MOB4Q9Y3A3 225 aa12.85□□□□□ -0.35
PBX1-215ENST00000559240 SCO2A0A1W2PP80 73 aa12.84□□□□□ -0.35
PBX1-215ENST00000559240 APCSP02743 223 aa12.84□□□□□ -0.35
PBX1-215ENST00000559240 HES1Q14469 280 aa12.84□□□□□ -0.35
PBX1-215ENST00000559240 TMEM14EPQ6UXP3 125 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms