RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 SIX6O95475 246 aa12.02□□□□□ -0.49
LRRC28-210ENST00000558879 TAS2R60P59551 318 aa12.02□□□□□ -0.49
LRRC28-210ENST00000558879 RNASE8Q8TDE3 154 aaKnown RBP12.02□□□□□ -0.49
LRRC28-210ENST00000558879 ODF3Q96PU9 254 aa12.02□□□□□ -0.49
LRRC28-210ENST00000558879 NPCDR1Q9BY65 106 aa12.02□□□□□ -0.49
LRRC28-210ENST00000558879 ZNF586Q9NXT0 402 aa12.02□□□□□ -0.49
LRRC28-210ENST00000558879 TMEM14CQ9P0S9 112 aa12.02□□□□□ -0.49
LRRC28-210ENST00000558879 H0YIZ8 118 aa12.01□□□□□ -0.49
LRRC28-210ENST00000558879 HTN3P15516 51 aa12.01□□□□□ -0.49
LRRC28-210ENST00000558879 NHLH2Q02577 135 aa12.01□□□□□ -0.49
LRRC28-210ENST00000558879 KIR3DS1Q14943 382 aa12.01□□□□□ -0.49
LRRC28-210ENST00000558879 MRPL53Q96EL3 112 aaKnown RBP12.01□□□□□ -0.49
LRRC28-210ENST00000558879 C16orf74Q96GX8 76 aa12.01□□□□□ -0.49
LRRC28-210ENST00000558879 MARVELD1Q9BSK0 173 aa12.01□□□□□ -0.49
LRRC28-210ENST00000558879 PARD6GQ9BYG4 376 aaPredicted RBP12.01□□□□□ -0.49
LRRC28-210ENST00000558879 PPP1R14DQ9NXH3 145 aa12.01□□□□□ -0.49
LRRC28-210ENST00000558879 OR5AC2Q9NZP5 309 aa12.01□□□□□ -0.49
LRRC28-210ENST00000558879 TRBV19A0A075B6N1 114 aa12□□□□□ -0.49
LRRC28-210ENST00000558879 E5RGE8 158 aa12□□□□□ -0.49
LRRC28-210ENST00000558879 NPIPB6E9PJ23 425 aa12□□□□□ -0.49
LRRC28-210ENST00000558879 INMT-MINDY4F8WBC2 141 aa12□□□□□ -0.49
LRRC28-210ENST00000558879 GFI1BQ5VTD9 330 aa12□□□□□ -0.49
LRRC28-210ENST00000558879 TMEM88Q6PEY1 159 aa12□□□□□ -0.49
LRRC28-210ENST00000558879 OR5C1Q8NGR4 320 aa12□□□□□ -0.49
LRRC28-210ENST00000558879 OR10J6PQ8NGY7 276 aa12□□□□□ -0.49
LRRC28-210ENST00000558879 TMEM263Q8WUH6 116 aaKnown RBP12□□□□□ -0.49
LRRC28-210ENST00000558879 LINC01587Q99440 93 aa12□□□□□ -0.49
LRRC28-210ENST00000558879 H7BYZ3 331 aa11.99□□□□□ -0.49
LRRC28-210ENST00000558879 H2BFSP57053 126 aa11.99□□□□□ -0.49
LRRC28-210ENST00000558879 PDE6HQ13956 83 aa11.99□□□□□ -0.49
LRRC28-210ENST00000558879 SLC25A31Q9H0C2 315 aa11.99□□□□□ -0.49
LRRC28-210ENST00000558879 NDUFB4O95168 129 aa11.98□□□□□ -0.49
LRRC28-210ENST00000558879 CYCSP99999 105 aaKnown RBP11.98□□□□□ -0.49
LRRC28-210ENST00000558879 RNF212Q495C1 297 aa11.98□□□□□ -0.49
LRRC28-210ENST00000558879 LRRC37A5PQ49AS3 106 aa11.98□□□□□ -0.49
LRRC28-210ENST00000558879 GCSAMLQ5JQS6 135 aa11.98□□□□□ -0.49
LRRC28-210ENST00000558879 ZNF493Q6ZR52 646 aa11.98□□□□□ -0.49
LRRC28-210ENST00000558879 C15orf53Q8NAA6 179 aa11.98□□□□□ -0.49
LRRC28-210ENST00000558879 THAP6Q8TBB0 222 aa11.98□□□□□ -0.49
LRRC28-210ENST00000558879 M0R3E3 92 aa11.97□□□□□ -0.49
LRRC28-210ENST00000558879 RLN2P04090 185 aa11.97□□□□□ -0.49
LRRC28-210ENST00000558879 CT45A10P0DMU9 189 aa11.97□□□□□ -0.49
LRRC28-210ENST00000558879 DEFB130BP0DP73 79 aa11.97□□□□□ -0.49
LRRC28-210ENST00000558879 DEFB130AP0DP74 79 aa11.97□□□□□ -0.49
LRRC28-210ENST00000558879 PYYP10082 97 aa11.97□□□□□ -0.49
LRRC28-210ENST00000558879 HIST1H1EP10412 219 aaKnown RBP11.97□□□□□ -0.49
LRRC28-210ENST00000558879 FCN2Q15485 313 aa11.97□□□□□ -0.49
LRRC28-210ENST00000558879 LGALS9BQ3B8N2 356 aa11.97□□□□□ -0.49
LRRC28-210ENST00000558879 LINC00336Q6ZUF6 198 aa11.97□□□□□ -0.49
LRRC28-210ENST00000558879 FAM167A-AS1Q96KT0 104 aa11.97□□□□□ -0.49
LRRC28-210ENST00000558879 SLC25A2Q9BXI2 301 aa11.97□□□□□ -0.49
LRRC28-210ENST00000558879 WDR61Q9GZS3 305 aaKnown RBP11.97□□□□□ -0.49
LRRC28-210ENST00000558879 TIMM8BQ9Y5J9 83 aaPredicted RBP11.97□□□□□ -0.49
LRRC28-210ENST00000558879 ATP5G1P05496 136 aa11.96□□□□□ -0.49
LRRC28-210ENST00000558879 ATP5G3P48201 142 aa11.96□□□□□ -0.49
LRRC28-210ENST00000558879 Q6ZR54 194 aa11.96□□□□□ -0.49
LRRC28-210ENST00000558879 UBE2DNLQ8IWF7 75 aa11.96□□□□□ -0.49
LRRC28-210ENST00000558879 LINC00612Q8N6U2 182 aa11.96□□□□□ -0.49
LRRC28-210ENST00000558879 PPP1R1CQ8WVI7 109 aa11.96□□□□□ -0.49
LRRC28-210ENST00000558879 PRELID1Q9Y255 219 aa11.96□□□□□ -0.49
LRRC28-210ENST00000558879 FAT2Q9NYQ8 4349 aa11.96□□□□□ -0.49
LRRC28-210ENST00000558879 CBY3A6NI87 242 aa11.95□□□□□ -0.5
LRRC28-210ENST00000558879 LEPP41159 167 aa11.95□□□□□ -0.5
LRRC28-210ENST00000558879 CLINT1Q14677 625 aa11.95□□□□□ -0.5
LRRC28-210ENST00000558879 FAM19A4Q96LR4 140 aa11.95□□□□□ -0.5
LRRC28-210ENST00000558879 MRPL32Q9BYC8 188 aaKnown RBP11.95□□□□□ -0.5
LRRC28-210ENST00000558879 BATF3Q9NR55 127 aa11.95□□□□□ -0.5
LRRC28-210ENST00000558879 KCNIP2Q9NS61 270 aa11.95□□□□□ -0.5
LRRC28-210ENST00000558879 DNAH17Q9UFH2 4485 aa11.95□□□□□ -0.5
LRRC28-210ENST00000558879 MUC4Q99102 2169 aa11.94□□□□□ -0.5
LRRC28-210ENST00000558879 A0A1B0GVY2 172 aa11.94□□□□□ -0.5
LRRC28-210ENST00000558879 KLLNB2CW77 178 aa11.94□□□□□ -0.5
LRRC28-210ENST00000558879 RTL8CO15255 209 aa11.94□□□□□ -0.5
LRRC28-210ENST00000558879 HTN1P15515 57 aa11.94□□□□□ -0.5
LRRC28-210ENST00000558879 DEFA1P59665 94 aa11.94□□□□□ -0.5
LRRC28-210ENST00000558879 DEFA3P59666 94 aa11.94□□□□□ -0.5
LRRC28-210ENST00000558879 MIR17HGQ75NE6 70 aa11.94□□□□□ -0.5
LRRC28-210ENST00000558879 NOP10Q9NPE3 64 aaKnown RBP11.94□□□□□ -0.5
LRRC28-210ENST00000558879 DNAH2Q9P225 4427 aa11.94□□□□□ -0.5
LRRC28-210ENST00000558879 F5H768 121 aa11.93□□□□□ -0.5
LRRC28-210ENST00000558879 MPC2O95563 127 aa11.93□□□□□ -0.5
LRRC28-210ENST00000558879 EXOC3-AS1Q8N2X6 119 aa11.93□□□□□ -0.5
LRRC28-210ENST00000558879 ATP5SQ99766 215 aa11.93□□□□□ -0.5
LRRC28-210ENST00000558879 PYGO2Q9BRQ0 406 aa11.93□□□□□ -0.5
LRRC28-210ENST00000558879 HSPB11Q9Y547 144 aa11.93□□□□□ -0.5
LRRC28-210ENST00000558879 J3KRW8 73 aa11.92□□□□□ -0.5
LRRC28-210ENST00000558879 M0R2N4 97 aa11.92□□□□□ -0.5
LRRC28-210ENST00000558879 SLC25A5P05141 298 aaKnown RBP11.92□□□□□ -0.5
LRRC28-210ENST00000558879 PET100P0DJ07 73 aa11.92□□□□□ -0.5
LRRC28-210ENST00000558879 FAM3BP58499 235 aaPredicted RBP11.92□□□□□ -0.5
LRRC28-210ENST00000558879 ERCC8Q13216 396 aa11.92□□□□□ -0.5
LRRC28-210ENST00000558879 C9orf47Q6ZRZ4 202 aa11.92□□□□□ -0.5
LRRC28-210ENST00000558879 BLNKQ8WV28 456 aa11.92□□□□□ -0.5
LRRC28-210ENST00000558879 FUT9Q9Y231 359 aa11.92□□□□□ -0.5
LRRC28-210ENST00000558879 TIMM9Q9Y5J7 89 aa11.92□□□□□ -0.5
LRRC28-210ENST00000558879 PKHD1P08F94 4074 aa11.91□□□□□ -0.5
LRRC28-210ENST00000558879 IGLV2-18A0A075B6J9 118 aa11.91□□□□□ -0.5
LRRC28-210ENST00000558879 TRAV12-3A0A0B4J271 114 aa11.91□□□□□ -0.5
LRRC28-210ENST00000558879 C7orf71A4D174 169 aa11.91□□□□□ -0.5
LRRC28-210ENST00000558879 CRISP2P16562 243 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms