RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 NDUFAF3Q9BU61 184 aa8.9□□□□□ -0.98
SMAD3-208ENST00000558827 SMIM3Q9BZL3 60 aa8.9□□□□□ -0.98
SMAD3-208ENST00000558827 E5RGE8 158 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 M0R2N4 97 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 M0R3E3 92 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 EIF3GO75821 320 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMAD3-208ENST00000558827 AMBPP02760 352 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 TCTAP57738 103 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 ERCC8Q13216 396 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 ATP6V1FQ16864 119 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 MIR17HGQ75NE6 70 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 OR10J6PQ8NGY7 276 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 SAT2Q96F10 170 aaPredicted RBP8.89□□□□□ -0.99
SMAD3-208ENST00000558827 PFDN5Q99471 154 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 SLC50A1Q9BRV3 221 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 NPCDR1Q9BY65 106 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 NMES1Q9C002 83 aa8.89□□□□□ -0.99
SMAD3-208ENST00000558827 PRAF2O60831 178 aa8.88□□□□□ -0.99
SMAD3-208ENST00000558827 CT45A10P0DMU9 189 aa8.88□□□□□ -0.99
SMAD3-208ENST00000558827 EXOC3-AS1Q8N2X6 119 aa8.88□□□□□ -0.99
SMAD3-208ENST00000558827 PPP1R1CQ8WVI7 109 aa8.88□□□□□ -0.99
SMAD3-208ENST00000558827 MARVELD1Q9BSK0 173 aa8.88□□□□□ -0.99
SMAD3-208ENST00000558827 SLC25A31Q9H0C2 315 aa8.88□□□□□ -0.99
SMAD3-208ENST00000558827 RNF24Q9Y225 148 aa8.88□□□□□ -0.99
SMAD3-208ENST00000558827 IGLV2-18A0A075B6J9 118 aa8.87□□□□□ -0.99
SMAD3-208ENST00000558827 CXCL2P19875 107 aa8.87□□□□□ -0.99
SMAD3-208ENST00000558827 CDKN1BP46527 198 aa8.87□□□□□ -0.99
SMAD3-208ENST00000558827 TMEM88Q6PEY1 159 aa8.87□□□□□ -0.99
SMAD3-208ENST00000558827 TIMM9Q9Y5J7 89 aa8.87□□□□□ -0.99
SMAD3-208ENST00000558827 TRAV12-3A0A0B4J271 114 aa8.86□□□□□ -0.99
SMAD3-208ENST00000558827 PLAC8L1A1L4L8 177 aa8.86□□□□□ -0.99
SMAD3-208ENST00000558827 NDUFB4O95168 129 aa8.86□□□□□ -0.99
SMAD3-208ENST00000558827 GFI1BQ5VTD9 330 aa8.86□□□□□ -0.99
SMAD3-208ENST00000558827 UBE2DNLQ8IWF7 75 aa8.86□□□□□ -0.99
SMAD3-208ENST00000558827 SLC25A2Q9BXI2 301 aa8.86□□□□□ -0.99
SMAD3-208ENST00000558827 NOP10Q9NPE3 64 aaKnown RBP8.86□□□□□ -0.99
SMAD3-208ENST00000558827 TRBV19A0A075B6N1 114 aa8.85□□□□□ -0.99
SMAD3-208ENST00000558827 F5H768 121 aa8.85□□□□□ -0.99
SMAD3-208ENST00000558827 MPC2O95563 127 aa8.85□□□□□ -0.99
SMAD3-208ENST00000558827 OR10J4P0C629 311 aa8.85□□□□□ -0.99
SMAD3-208ENST00000558827 HIST1H1EP10412 219 aaKnown RBP8.85□□□□□ -0.99
SMAD3-208ENST00000558827 TAS2R60P59551 318 aa8.85□□□□□ -0.99
SMAD3-208ENST00000558827 CYCSP99999 105 aaKnown RBP8.85□□□□□ -0.99
SMAD3-208ENST00000558827 ICAM4Q14773 271 aa8.85□□□□□ -0.99
SMAD3-208ENST00000558827 FAM122CQ6P4D5 195 aa8.85□□□□□ -0.99
SMAD3-208ENST00000558827 POM121L12Q8N7R1 296 aa8.85□□□□□ -0.99
SMAD3-208ENST00000558827 FAM167A-AS1Q96KT0 104 aa8.85□□□□□ -0.99
SMAD3-208ENST00000558827 WDR61Q9GZS3 305 aaKnown RBP8.85□□□□□ -0.99
SMAD3-208ENST00000558827 MBD2Q9UBB5 411 aa8.85□□□□□ -0.99
SMAD3-208ENST00000558827 ALG5Q9Y673 324 aa8.85□□□□□ -0.99
SMAD3-208ENST00000558827 IGKV2-40A0A087WW87 121 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-208ENST00000558827 TEX48A0A1B0GUV7 120 aa8.84□□□□□ -0.99
SMAD3-208ENST00000558827 MPDU1O75352 247 aa8.84□□□□□ -0.99
SMAD3-208ENST00000558827 IGKV2D-40P01614 121 aaPredicted RBP8.84□□□□□ -0.99
SMAD3-208ENST00000558827 P0DMU3 169 aa8.84□□□□□ -0.99
SMAD3-208ENST00000558827 FAM231AP0DMU4 169 aa8.84□□□□□ -0.99
SMAD3-208ENST00000558827 FAM231CP0DMU5 169 aa8.84□□□□□ -0.99
SMAD3-208ENST00000558827 TSPOP30536 169 aa8.84□□□□□ -0.99
SMAD3-208ENST00000558827 GUK1Q16774 197 aa8.84□□□□□ -0.99
SMAD3-208ENST00000558827 CHAC2Q8WUX2 184 aa8.84□□□□□ -0.99
SMAD3-208ENST00000558827 WFDC1Q9HC57 220 aa8.84□□□□□ -0.99
SMAD3-208ENST00000558827 HSPB11Q9Y547 144 aa8.84□□□□□ -0.99
SMAD3-208ENST00000558827 DNAH17Q9UFH2 4485 aa8.84□□□□□ -1
SMAD3-208ENST00000558827 LYRM9A8MSI8 78 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 NPIPB6E9PJ23 425 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 NUDT3O95989 172 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 RPL12P30050 165 aaKnown RBP8.83□□□□□ -1
SMAD3-208ENST00000558827 RNASE4P34096 147 aaKnown RBP8.83□□□□□ -1
SMAD3-208ENST00000558827 OXA1LQ15070 435 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 FFAR4Q5NUL3 377 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 Q6ZQT7 251 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 TMEM256Q8N2U0 113 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 ATP5SQ99766 215 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 VGLL1Q99990 258 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 PAXXQ9BUH6 204 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 AGPAT4-IT1Q9H0P7 198 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 OR51M1Q9H341 326 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 TMEM14CQ9P0S9 112 aa8.83□□□□□ -1
SMAD3-208ENST00000558827 DNAH2Q9P225 4427 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 H7BYZ3 331 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 OR7C2O60412 319 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 NBEAP1P0C6P0 100 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 LEPP41159 167 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 CD300CQ08708 224 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 BTN1A1Q13410 526 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 SCGB1C1Q8TD33 95 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 RNF141Q8WVD5 230 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 PHYHIPLQ96FC7 376 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 C16orf74Q96GX8 76 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 FUT9Q9Y231 359 aa8.82□□□□□ -1
SMAD3-208ENST00000558827 TIMM8BQ9Y5J9 83 aaPredicted RBP8.82□□□□□ -1
SMAD3-208ENST00000558827 GAGE12BA1L429 117 aa8.81□□□□□ -1
SMAD3-208ENST00000558827 C17orf112F2Z3M2 114 aa8.81□□□□□ -1
SMAD3-208ENST00000558827 GAGE7O76087 117 aa8.81□□□□□ -1
SMAD3-208ENST00000558827 IFNA5P01569 189 aa8.81□□□□□ -1
SMAD3-208ENST00000558827 GAGE12FP0CL80 117 aa8.81□□□□□ -1
SMAD3-208ENST00000558827 GAGE12GP0CL81 117 aa8.81□□□□□ -1
SMAD3-208ENST00000558827 GAGE12IP0CL82 117 aa8.81□□□□□ -1
SMAD3-208ENST00000558827 RANP62826 216 aaKnown RBP8.81□□□□□ -1
SMAD3-208ENST00000558827 CCDC28AQ8IWP9 274 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms