RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 TRAV10A0A0B4J240 114 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 C11orf94C9JXX5 98 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 AMBPP02760 352 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 SPART-AS1P0CW21 52 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 HTN1P15515 57 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 KIR3DS1Q14943 382 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 FAM222AQ5U5X8 452 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 SCGB1C1Q8TD33 95 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 FAM167A-AS1Q96KT0 104 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 LINC01587Q99440 93 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 SLC25A2Q9BXI2 301 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 TMEM14CQ9P0S9 112 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 TIMM9Q9Y5J7 89 aa11.96□□□□□ -0.49
BRF1-219ENST00000551787 TRBV19A0A075B6N1 114 aa11.95□□□□□ -0.5
BRF1-219ENST00000551787 DEFB131BA0A096LNP1 70 aa11.95□□□□□ -0.5
BRF1-219ENST00000551787 TMEM189A5PLL7 270 aa11.95□□□□□ -0.5
BRF1-219ENST00000551787 M0R3E3 92 aa11.95□□□□□ -0.5
BRF1-219ENST00000551787 NDUFB4O95168 129 aa11.95□□□□□ -0.5
BRF1-219ENST00000551787 IFNA5P01569 189 aa11.95□□□□□ -0.5
BRF1-219ENST00000551787 HIST1H1EP10412 219 aaKnown RBP11.95□□□□□ -0.5
BRF1-219ENST00000551787 AZU1P20160 251 aa11.95□□□□□ -0.5
BRF1-219ENST00000551787 RGS21Q2M5E4 152 aa11.95□□□□□ -0.5
BRF1-219ENST00000551787 EXOC3-AS1Q8N2X6 119 aa11.95□□□□□ -0.5
BRF1-219ENST00000551787 RPP25LQ8N5L8 163 aaKnown RBP11.95□□□□□ -0.5
BRF1-219ENST00000551787 OR10J6PQ8NGY7 276 aa11.95□□□□□ -0.5
BRF1-219ENST00000551787 DKK2Q9UBU2 259 aa11.95□□□□□ -0.5
BRF1-219ENST00000551787 YTHDF2Q9Y5A9 579 aaKnown RBP11.95□□□□□ -0.5
BRF1-219ENST00000551787 VPS13DQ5THJ4 4388 aa11.94□□□□□ -0.5
BRF1-219ENST00000551787 C17orf112F2Z3M2 114 aa11.94□□□□□ -0.5
BRF1-219ENST00000551787 J3KRW8 73 aa11.94□□□□□ -0.5
BRF1-219ENST00000551787 EIF3GO75821 320 aaKnown RBP eCLIP11.94□□□□□ -0.5
BRF1-219ENST00000551787 Q5BKY6 102 aa11.94□□□□□ -0.5
BRF1-219ENST00000551787 FFAR4Q5NUL3 377 aa11.94□□□□□ -0.5
BRF1-219ENST00000551787 APLNQ9ULZ1 77 aa11.94□□□□□ -0.5
BRF1-219ENST00000551787 OR10J4P0C629 311 aa11.93□□□□□ -0.5
BRF1-219ENST00000551787 CT45A10P0DMU9 189 aa11.93□□□□□ -0.5
BRF1-219ENST00000551787 CDKN1BP46527 198 aa11.93□□□□□ -0.5
BRF1-219ENST00000551787 KCNIP2Q9NS61 270 aa11.93□□□□□ -0.5
BRF1-219ENST00000551787 FUT9Q9Y231 359 aa11.93□□□□□ -0.5
BRF1-219ENST00000551787 IGHV4-4A0A075B6R2 117 aa11.92□□□□□ -0.5
BRF1-219ENST00000551787 ZNF253O75346 499 aa11.92□□□□□ -0.5
BRF1-219ENST00000551787 HTN3P15516 51 aa11.92□□□□□ -0.5
BRF1-219ENST00000551787 ERCC8Q13216 396 aa11.92□□□□□ -0.5
BRF1-219ENST00000551787 ICAM4Q14773 271 aa11.92□□□□□ -0.5
BRF1-219ENST00000551787 LGALS9CQ6DKI2 356 aa11.92□□□□□ -0.5
BRF1-219ENST00000551787 NIPSNAP3BQ9BS92 247 aa11.92□□□□□ -0.5
BRF1-219ENST00000551787 PAXXQ9BUH6 204 aa11.92□□□□□ -0.5
BRF1-219ENST00000551787 OR51M1Q9H341 326 aa11.92□□□□□ -0.5
BRF1-219ENST00000551787 NBEAP1P0C6P0 100 aa11.91□□□□□ -0.5
BRF1-219ENST00000551787 RNF141Q8WVD5 230 aa11.91□□□□□ -0.5
BRF1-219ENST00000551787 FXYD5Q96DB9 178 aa11.91□□□□□ -0.5
BRF1-219ENST00000551787 MRPL32Q9BYC8 188 aaKnown RBP11.91□□□□□ -0.5
BRF1-219ENST00000551787 KMT2AQ03164 3969 aa11.91□□□□□ -0.5
BRF1-219ENST00000551787 OR7C2O60412 319 aa11.9□□□□□ -0.5
BRF1-219ENST00000551787 OXA1LQ15070 435 aa11.9□□□□□ -0.5
BRF1-219ENST00000551787 GFI1BQ5VTD9 330 aa11.9□□□□□ -0.5
BRF1-219ENST00000551787 FAM122CQ6P4D5 195 aa11.9□□□□□ -0.5
BRF1-219ENST00000551787 TRAV12-3A0A0B4J271 114 aa11.89□□□□□ -0.51
BRF1-219ENST00000551787 NPIPB6E9PJ23 425 aa11.89□□□□□ -0.51
BRF1-219ENST00000551787 TSPOP30536 169 aa11.89□□□□□ -0.51
BRF1-219ENST00000551787 TCTAP57738 103 aa11.89□□□□□ -0.51
BRF1-219ENST00000551787 TAS2R60P59551 318 aa11.89□□□□□ -0.51
BRF1-219ENST00000551787 PDE6HQ13956 83 aa11.89□□□□□ -0.51
BRF1-219ENST00000551787 ZNF503Q96F45 646 aa11.89□□□□□ -0.51
BRF1-219ENST00000551787 AGPAT4-IT1Q9H0P7 198 aa11.89□□□□□ -0.51
BRF1-219ENST00000551787 AAMDCQ9H7C9 122 aa11.89□□□□□ -0.51
BRF1-219ENST00000551787 IGKV2-40A0A087WW87 121 aaPredicted RBP11.88□□□□□ -0.51
BRF1-219ENST00000551787 IGKV2D-40P01614 121 aaPredicted RBP11.88□□□□□ -0.51
BRF1-219ENST00000551787 DEFB130BP0DP73 79 aa11.88□□□□□ -0.51
BRF1-219ENST00000551787 DEFB130AP0DP74 79 aa11.88□□□□□ -0.51
BRF1-219ENST00000551787 DAD1P61803 113 aa11.88□□□□□ -0.51
BRF1-219ENST00000551787 RANP62826 216 aaKnown RBP11.88□□□□□ -0.51
BRF1-219ENST00000551787 TMEM256Q8N2U0 113 aa11.88□□□□□ -0.51
BRF1-219ENST00000551787 MRPL53Q96EL3 112 aaKnown RBP11.88□□□□□ -0.51
BRF1-219ENST00000551787 PHYHIPLQ96FC7 376 aa11.88□□□□□ -0.51
BRF1-219ENST00000551787 PRELID1Q9Y255 219 aa11.88□□□□□ -0.51
BRF1-219ENST00000551787 PLAC8L1A1L4L8 177 aa11.87□□□□□ -0.51
BRF1-219ENST00000551787 H7BYZ3 331 aa11.87□□□□□ -0.51
BRF1-219ENST00000551787 LEPP41159 167 aa11.87□□□□□ -0.51
BRF1-219ENST00000551787 RAB2AP61019 212 aa11.87□□□□□ -0.51
BRF1-219ENST00000551787 VGLL1Q99990 258 aa11.87□□□□□ -0.51
BRF1-219ENST00000551787 TEX48A0A1B0GUV7 120 aa11.86□□□□□ -0.51
BRF1-219ENST00000551787 HMGB3O15347 200 aaKnown RBP11.86□□□□□ -0.51
BRF1-219ENST00000551787 GIPP09681 153 aaPredicted RBP11.86□□□□□ -0.51
BRF1-219ENST00000551787 UBE2L3P68036 154 aaKnown RBP11.86□□□□□ -0.51
BRF1-219ENST00000551787 HSD17B11Q8NBQ5 300 aa11.86□□□□□ -0.51
BRF1-219ENST00000551787 AQP10Q96PS8 301 aa11.86□□□□□ -0.51
BRF1-219ENST00000551787 NDUFAF3Q9BU61 184 aa11.86□□□□□ -0.51
BRF1-219ENST00000551787 RNASE4P34096 147 aaKnown RBP11.85□□□□□ -0.51
BRF1-219ENST00000551787 CD300CQ08708 224 aa11.85□□□□□ -0.51
BRF1-219ENST00000551787 ACOT6Q3I5F7 207 aaPredicted RBP11.85□□□□□ -0.51
BRF1-219ENST00000551787 LINC00477Q96M19 166 aa11.85□□□□□ -0.51
BRF1-219ENST00000551787 ODF3Q96PU9 254 aa11.85□□□□□ -0.51
BRF1-219ENST00000551787 NOP10Q9NPE3 64 aaKnown RBP11.85□□□□□ -0.51
BRF1-219ENST00000551787 EPPK1P58107 5090 aaKnown RBP11.85□□□□□ -0.51
BRF1-219ENST00000551787 FXYD6-FXYD2A0A087WZ82 144 aa11.84□□□□□ -0.51
BRF1-219ENST00000551787 A0A1W2PPV4 95 aa11.84□□□□□ -0.51
BRF1-219ENST00000551787 LYRM9A8MSI8 78 aa11.84□□□□□ -0.51
BRF1-219ENST00000551787 M6PRP20645 277 aa11.84□□□□□ -0.51
BRF1-219ENST00000551787 TAS2R45P59539 299 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms