RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 OR2G3Q8NGZ4 309 aa18.78■□□□□ 0.6
CPSF6-205ENST00000550075 RNF141Q8WVD5 230 aa18.78■□□□□ 0.6
CPSF6-205ENST00000550075 TMEM208Q9BTX3 173 aa18.78■□□□□ 0.6
CPSF6-205ENST00000550075 NUPR2A6NF83 97 aa18.77■□□□□ 0.6
CPSF6-205ENST00000550075 NDUFB4O95168 129 aa18.77■□□□□ 0.6
CPSF6-205ENST00000550075 OR10J4P0C629 311 aa18.77■□□□□ 0.6
CPSF6-205ENST00000550075 G3V3Q6 166 aa18.76■□□□□ 0.59
CPSF6-205ENST00000550075 ARPC5O15511 151 aa18.76■□□□□ 0.59
CPSF6-205ENST00000550075 RBMY1A1P0DJD3 496 aaKnown RBP18.76■□□□□ 0.59
CPSF6-205ENST00000550075 RBMY1CP0DJD4 496 aa18.76■□□□□ 0.59
CPSF6-205ENST00000550075 ATP6V0CP27449 155 aa18.76■□□□□ 0.59
CPSF6-205ENST00000550075 RAB2AP61019 212 aa18.76■□□□□ 0.59
CPSF6-205ENST00000550075 RBMY1FQ15415 496 aaKnown RBP18.76■□□□□ 0.59
CPSF6-205ENST00000550075 FXYD5Q96DB9 178 aa18.76■□□□□ 0.59
CPSF6-205ENST00000550075 GNPNAT1Q96EK6 184 aaPredicted RBP18.76■□□□□ 0.59
CPSF6-205ENST00000550075 RFNGQ9Y644 331 aa18.76■□□□□ 0.59
CPSF6-205ENST00000550075 CSMD3Q7Z407 3707 aa18.75■□□□□ 0.59
CPSF6-205ENST00000550075 TMEM189A5PLL7 270 aa18.75■□□□□ 0.59
CPSF6-205ENST00000550075 HBE1P02100 147 aa18.75■□□□□ 0.59
CPSF6-205ENST00000550075 MBP02144 154 aa18.75■□□□□ 0.59
CPSF6-205ENST00000550075 TSPOP30536 169 aa18.75■□□□□ 0.59
CPSF6-205ENST00000550075 SERF2P84101 59 aa18.75■□□□□ 0.59
CPSF6-205ENST00000550075 OR10G4Q8NGN3 311 aa18.75■□□□□ 0.59
CPSF6-205ENST00000550075 OR10G9Q8NGN4 311 aa18.75■□□□□ 0.59
CPSF6-205ENST00000550075 OR10G7Q8NGN6 311 aa18.75■□□□□ 0.59
CPSF6-205ENST00000550075 PRAC2D3DTV9 90 aa18.74■□□□□ 0.59
CPSF6-205ENST00000550075 TAAR5O14804 337 aa18.74■□□□□ 0.59
CPSF6-205ENST00000550075 FAM122CQ6P4D5 195 aa18.74■□□□□ 0.59
CPSF6-205ENST00000550075 PQLC2Q6ZP29 291 aa18.74■□□□□ 0.59
CPSF6-205ENST00000550075 M0R3E3 92 aa18.73■□□□□ 0.59
CPSF6-205ENST00000550075 PRB4P10163 310 aaPredicted RBP18.73■□□□□ 0.59
CPSF6-205ENST00000550075 CDKN1BP46527 198 aa18.73■□□□□ 0.59
CPSF6-205ENST00000550075 ICAM4Q14773 271 aa18.73■□□□□ 0.59
CPSF6-205ENST00000550075 RPL7L1Q6DKI1 246 aaKnown RBP18.73■□□□□ 0.59
CPSF6-205ENST00000550075 BAP18Q8IXM2 172 aa18.73■□□□□ 0.59
CPSF6-205ENST00000550075 C1orf158Q8N1D5 194 aa18.73■□□□□ 0.59
CPSF6-205ENST00000550075 EXOC3-AS1Q8N2X6 119 aa18.73■□□□□ 0.59
CPSF6-205ENST00000550075 STARD9Q9P2P6 4700 aa18.73■□□□□ 0.59
CPSF6-205ENST00000550075 NPIPB6E9PJ23 425 aa18.72■□□□□ 0.59
CPSF6-205ENST00000550075 CDC34P49427 236 aaPredicted RBP18.72■□□□□ 0.59
CPSF6-205ENST00000550075 NANOS2P60321 138 aaKnown RBP18.72■□□□□ 0.59
CPSF6-205ENST00000550075 LYPD1Q8N2G4 141 aa18.72■□□□□ 0.59
CPSF6-205ENST00000550075 PHYHIPLQ96FC7 376 aa18.72■□□□□ 0.59
CPSF6-205ENST00000550075 ODF3Q96PU9 254 aa18.72■□□□□ 0.59
CPSF6-205ENST00000550075 KLK5Q9Y337 293 aaPredicted RBP18.72■□□□□ 0.59
CPSF6-205ENST00000550075 SMLR1H3BR10 107 aa18.71■□□□□ 0.59
CPSF6-205ENST00000550075 CRXO43186 299 aaPredicted RBP18.71■□□□□ 0.59
CPSF6-205ENST00000550075 JTBO76095 146 aa18.71■□□□□ 0.59
CPSF6-205ENST00000550075 RRN3P1Q2M238 152 aa18.71■□□□□ 0.59
CPSF6-205ENST00000550075 TMEM256Q8N2U0 113 aa18.71■□□□□ 0.59
CPSF6-205ENST00000550075 TENM2Q9NT68 2774 aa18.71■□□□□ 0.59
CPSF6-205ENST00000550075 TRAV12-2A0A075B6T6 113 aa18.7■□□□□ 0.58
CPSF6-205ENST00000550075 LEPP41159 167 aa18.7■□□□□ 0.58
CPSF6-205ENST00000550075 CSN1S1P47710 185 aa18.7■□□□□ 0.58
CPSF6-205ENST00000550075 CEMP1Q6PRD7 247 aaPredicted RBP18.7■□□□□ 0.58
CPSF6-205ENST00000550075 PHLDA1Q8WV24 401 aaPredicted RBP18.7■□□□□ 0.58
CPSF6-205ENST00000550075 ZNF503Q96F45 646 aa18.7■□□□□ 0.58
CPSF6-205ENST00000550075 SH3BGRL3Q9H299 93 aa18.7■□□□□ 0.58
CPSF6-205ENST00000550075 TEX48A0A1B0GUV7 120 aa18.69■□□□□ 0.58
CPSF6-205ENST00000550075 ZNF345Q14585 488 aa18.69■□□□□ 0.58
CPSF6-205ENST00000550075 RPP25LQ8N5L8 163 aaKnown RBP18.69■□□□□ 0.58
CPSF6-205ENST00000550075 C20orf144Q9BQM9 153 aa18.69■□□□□ 0.58
CPSF6-205ENST00000550075 LOC102723971A0A1B0GUV8 181 aa18.68■□□□□ 0.58
CPSF6-205ENST00000550075 RANP62826 216 aaKnown RBP18.68■□□□□ 0.58
CPSF6-205ENST00000550075 Q9H3A6 140 aa18.68■□□□□ 0.58
CPSF6-205ENST00000550075 HMSDA8MTL9 139 aa18.67■□□□□ 0.58
CPSF6-205ENST00000550075 FAM74A1Q5RGS3 127 aa18.67■□□□□ 0.58
CPSF6-205ENST00000550075 LINC00477Q96M19 166 aa18.67■□□□□ 0.58
CPSF6-205ENST00000550075 KMT2CQ8NEZ4 4911 aaKnown RBP18.67■□□□□ 0.58
CPSF6-205ENST00000550075 C11orf94C9JXX5 98 aa18.66■□□□□ 0.58
CPSF6-205ENST00000550075 CT45A10P0DMU9 189 aa18.66■□□□□ 0.58
CPSF6-205ENST00000550075 EMP1P54849 157 aa18.66■□□□□ 0.58
CPSF6-205ENST00000550075 TMEM78Q5T7P6 136 aa18.66■□□□□ 0.58
CPSF6-205ENST00000550075 ACTR3CQ9C0K3 210 aaPredicted RBP18.66■□□□□ 0.58
CPSF6-205ENST00000550075 EIF3GO75821 320 aaKnown RBP eCLIP18.65■□□□□ 0.58
CPSF6-205ENST00000550075 SPART-AS1P0CW21 52 aa18.65■□□□□ 0.58
CPSF6-205ENST00000550075 ARL14EPLP0DKL9 152 aa18.65■□□□□ 0.58
CPSF6-205ENST00000550075 KCNRGQ8N5I3 272 aa18.65■□□□□ 0.58
CPSF6-205ENST00000550075 RAB24Q969Q5 203 aa18.65■□□□□ 0.58
CPSF6-205ENST00000550075 LINC01587Q99440 93 aa18.65■□□□□ 0.58
CPSF6-205ENST00000550075 ARPC5LQ9BPX5 153 aa18.65■□□□□ 0.58
CPSF6-205ENST00000550075 IGKV2-40A0A087WW87 121 aaPredicted RBP18.64■□□□□ 0.57
CPSF6-205ENST00000550075 HMGB3O15347 200 aaKnown RBP18.64■□□□□ 0.57
CPSF6-205ENST00000550075 IGKV2D-40P01614 121 aaPredicted RBP18.64■□□□□ 0.57
CPSF6-205ENST00000550075 STAG3L2P0CL84 134 aa18.64■□□□□ 0.57
CPSF6-205ENST00000550075 STAG3L3P0CL85 134 aa18.64■□□□□ 0.57
CPSF6-205ENST00000550075 C9orf47Q6ZRZ4 202 aa18.64■□□□□ 0.57
CPSF6-205ENST00000550075 RXFP4Q8TDU9 374 aa18.64■□□□□ 0.57
CPSF6-205ENST00000550075 OTORQ9NRC9 128 aa18.64■□□□□ 0.57
CPSF6-205ENST00000550075 CELA1Q9UNI1 258 aa18.64■□□□□ 0.57
CPSF6-205ENST00000550075 A0A0D9SG52 128 aa18.63■□□□□ 0.57
CPSF6-205ENST00000550075 H7BYZ3 331 aa18.63■□□□□ 0.57
CPSF6-205ENST00000550075 TAS2R60P59551 318 aa18.63■□□□□ 0.57
CPSF6-205ENST00000550075 ERCC8Q13216 396 aa18.63■□□□□ 0.57
CPSF6-205ENST00000550075 AKR1C8PQ5T2L2 129 aa18.63■□□□□ 0.57
CPSF6-205ENST00000550075 GFI1BQ5VTD9 330 aa18.63■□□□□ 0.57
CPSF6-205ENST00000550075 CMTM2Q8TAZ6 248 aa18.63■□□□□ 0.57
CPSF6-205ENST00000550075 LCE6AA0A183 80 aa18.62■□□□□ 0.57
CPSF6-205ENST00000550075 ZNF705GA8MUZ8 300 aaPredicted RBP18.62■□□□□ 0.57
CPSF6-205ENST00000550075 AGPAT4-IT1Q9H0P7 198 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms