RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 PHLDA1Q8WV24 401 aaPredicted RBP11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 RPUSD4Q96CM3 377 aaKnown RBP11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 SLC35B3Q9H1N7 401 aa11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 OR51M1Q9H341 326 aa11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 RFNGQ9Y644 331 aa11.37□□□□□ -0.59
CHMP1A-206ENST00000549139 ZNF705DP0CH99 300 aaPredicted RBP11.36□□□□□ -0.59
CHMP1A-206ENST00000549139 ZNF705BP0CI00 300 aaPredicted RBP11.36□□□□□ -0.59
CHMP1A-206ENST00000549139 MIFP14174 115 aa11.36□□□□□ -0.59
CHMP1A-206ENST00000549139 M6PRP20645 277 aa11.36□□□□□ -0.59
CHMP1A-206ENST00000549139 FXYD7P58549 80 aa11.36□□□□□ -0.59
CHMP1A-206ENST00000549139 PSMG3Q9BT73 122 aaPredicted RBP11.36□□□□□ -0.59
CHMP1A-206ENST00000549139 MFFQ9GZY8 342 aa11.36□□□□□ -0.59
CHMP1A-206ENST00000549139 C11orf68Q9H3H3 251 aaKnown RBP11.36□□□□□ -0.59
CHMP1A-206ENST00000549139 X6R8D5 127 aa11.36□□□□□ -0.59
CHMP1A-206ENST00000549139 ZNF705FA8MVS1 300 aaPredicted RBP11.35□□□□□ -0.59
CHMP1A-206ENST00000549139 NDUFB4O95168 129 aa11.35□□□□□ -0.59
CHMP1A-206ENST00000549139 AMBPP02760 352 aa11.35□□□□□ -0.59
CHMP1A-206ENST00000549139 NBEAP1P0C6P0 100 aa11.35□□□□□ -0.59
CHMP1A-206ENST00000549139 TAS2R45P59539 299 aa11.35□□□□□ -0.59
CHMP1A-206ENST00000549139 OR2G3Q8NGZ4 309 aa11.35□□□□□ -0.59
CHMP1A-206ENST00000549139 MRPL53Q96EL3 112 aaKnown RBP11.35□□□□□ -0.59
CHMP1A-206ENST00000549139 PAXXQ9BUH6 204 aa11.35□□□□□ -0.59
CHMP1A-206ENST00000549139 PRELID1Q9Y255 219 aa11.35□□□□□ -0.59
CHMP1A-206ENST00000549139 BORCS7-ASMTA0A0B4J1R7 106 aa11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 TAAR5O14804 337 aa11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 ATP6V0CP27449 155 aa11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 SERF2P84101 59 aa11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 HIST1H1AQ02539 215 aaPredicted RBP11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 ZNF705AQ6ZN79 300 aaPredicted RBP11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 Q8NAQ8 132 aa11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 HSD17B11Q8NBQ5 300 aa11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 BLNKQ8WV28 456 aa11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 RNF141Q8WVD5 230 aa11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 FXYD5Q96DB9 178 aa11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 NEU1Q99519 415 aa11.34□□□□□ -0.59
CHMP1A-206ENST00000549139 A0A1W2PPV4 95 aa11.33□□□□□ -0.6
CHMP1A-206ENST00000549139 SMIM9A6NGZ8 99 aa11.33□□□□□ -0.6
CHMP1A-206ENST00000549139 ARPC5O15511 151 aa11.33□□□□□ -0.6
CHMP1A-206ENST00000549139 KHDC3LQ587J8 217 aa11.33□□□□□ -0.6
CHMP1A-206ENST00000549139 RPL7L1Q6DKI1 246 aaKnown RBP11.33□□□□□ -0.6
CHMP1A-206ENST00000549139 OR10G4Q8NGN3 311 aa11.33□□□□□ -0.6
CHMP1A-206ENST00000549139 OR10G9Q8NGN4 311 aa11.33□□□□□ -0.6
CHMP1A-206ENST00000549139 OR10G7Q8NGN6 311 aa11.33□□□□□ -0.6
CHMP1A-206ENST00000549139 ZNF503Q96F45 646 aa11.33□□□□□ -0.6
CHMP1A-206ENST00000549139 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
CHMP1A-206ENST00000549139 A0A1B0GVY2 172 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 HMSDA8MTL9 139 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 PRAC2D3DTV9 90 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 SMLR1H3BR10 107 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 OR7C2O60412 319 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 MBP02144 154 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 OR10J4P0C629 311 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 RBMY1A1P0DJD3 496 aaKnown RBP11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 RBMY1CP0DJD4 496 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 RAB2AP61019 212 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 RBMY1FQ15415 496 aaKnown RBP11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 SPINK13Q1W4C9 94 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 Q6ZNX1 250 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 C1orf158Q8N1D5 194 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 OR10J6PQ8NGY7 276 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 GNPNAT1Q96EK6 184 aaPredicted RBP11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 IGF2BP2-AS1Q96M15 143 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 PPP1R14DQ9NXH3 145 aa11.32□□□□□ -0.6
CHMP1A-206ENST00000549139 PKD1P98161 4303 aa11.31□□□□□ -0.6
CHMP1A-206ENST00000549139 IGHV4-28A0A0C4DH34 117 aa11.31□□□□□ -0.6
CHMP1A-206ENST00000549139 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
CHMP1A-206ENST00000549139 CRXO43186 299 aaPredicted RBP11.31□□□□□ -0.6
CHMP1A-206ENST00000549139 MED14OSP0DP75 135 aa11.31□□□□□ -0.6
CHMP1A-206ENST00000549139 PQLC2Q6ZP29 291 aa11.31□□□□□ -0.6
CHMP1A-206ENST00000549139 LYPD1Q8N2G4 141 aa11.31□□□□□ -0.6
CHMP1A-206ENST00000549139 EXOC3-AS1Q8N2X6 119 aa11.31□□□□□ -0.6
CHMP1A-206ENST00000549139 GOLT1BQ9Y3E0 138 aa11.31□□□□□ -0.6
CHMP1A-206ENST00000549139 M0R2Z0 102 aa11.3□□□□□ -0.6
CHMP1A-206ENST00000549139 M0R3E3 92 aa11.3□□□□□ -0.6
CHMP1A-206ENST00000549139 DEFB4AO15263 64 aa11.3□□□□□ -0.6
CHMP1A-206ENST00000549139 PRB4P10163 310 aaPredicted RBP11.3□□□□□ -0.6
CHMP1A-206ENST00000549139 ZNF345Q14585 488 aa11.3□□□□□ -0.6
CHMP1A-206ENST00000549139 ICAM4Q14773 271 aa11.3□□□□□ -0.6
CHMP1A-206ENST00000549139 FAM122CQ6P4D5 195 aa11.3□□□□□ -0.6
CHMP1A-206ENST00000549139 OR11H4Q8NGC9 324 aa11.3□□□□□ -0.6
CHMP1A-206ENST00000549139 CYTL1Q9NRR1 136 aa11.3□□□□□ -0.6
CHMP1A-206ENST00000549139 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
CHMP1A-206ENST00000549139 NPIPB6E9PJ23 425 aa11.29□□□□□ -0.6
CHMP1A-206ENST00000549139 CDKN1BP46527 198 aa11.29□□□□□ -0.6
CHMP1A-206ENST00000549139 CDC34P49427 236 aaPredicted RBP11.29□□□□□ -0.6
CHMP1A-206ENST00000549139 UBE2L3P68036 154 aaKnown RBP11.29□□□□□ -0.6
CHMP1A-206ENST00000549139 KCNRGQ8N5I3 272 aa11.29□□□□□ -0.6
CHMP1A-206ENST00000549139 C11orf45Q8TAV5 145 aa11.29□□□□□ -0.6
CHMP1A-206ENST00000549139 SH3BGRL3Q9H299 93 aa11.29□□□□□ -0.6
CHMP1A-206ENST00000549139 A0A0D9SG52 128 aa11.28□□□□□ -0.6
CHMP1A-206ENST00000549139 INSP01308 110 aa11.28□□□□□ -0.6
CHMP1A-206ENST00000549139 STAG3L2P0CL84 134 aa11.28□□□□□ -0.6
CHMP1A-206ENST00000549139 STAG3L3P0CL85 134 aa11.28□□□□□ -0.6
CHMP1A-206ENST00000549139 TSPOP30536 169 aa11.28□□□□□ -0.6
CHMP1A-206ENST00000549139 NANOS2P60321 138 aaKnown RBP11.28□□□□□ -0.6
CHMP1A-206ENST00000549139 RANP62826 216 aaKnown RBP11.28□□□□□ -0.6
CHMP1A-206ENST00000549139 RAB24Q969Q5 203 aa11.28□□□□□ -0.6
CHMP1A-206ENST00000549139 PHYHIPLQ96FC7 376 aa11.28□□□□□ -0.6
CHMP1A-206ENST00000549139 ST6GAL2Q96JF0 529 aa11.28□□□□□ -0.6
CHMP1A-206ENST00000549139 LINC00477Q96M19 166 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms